RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 TRHP20396 242 aaPredicted RBP25.33■■□□□ 1.65
LETMD1-205ENST00000546992 ARHGAP5Q13017 1502 aa25.32■■□□□ 1.64
LETMD1-205ENST00000546992 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
LETMD1-205ENST00000546992 CFAP74Q9C0B2 1584 aa25.28■■□□□ 1.64
LETMD1-205ENST00000546992 FGD6Q6ZV73 1430 aa25.28■■□□□ 1.64
LETMD1-205ENST00000546992 FANCAO15360 1455 aa25.28■■□□□ 1.64
LETMD1-205ENST00000546992 PTPN23Q9H3S7 1636 aa25.26■■□□□ 1.63
LETMD1-205ENST00000546992 MIA2Q96PC5 1412 aa25.24■■□□□ 1.63
LETMD1-205ENST00000546992 ABCC1P33527 1531 aa25.23■■□□□ 1.63
LETMD1-205ENST00000546992 CAMSAP2Q08AD1 1489 aa25.23■■□□□ 1.63
LETMD1-205ENST00000546992 TEX14Q8IWB6 1497 aa25.22■■□□□ 1.63
LETMD1-205ENST00000546992 NEO1Q92859 1461 aa25.22■■□□□ 1.63
LETMD1-205ENST00000546992 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
LETMD1-205ENST00000546992 CFDP1Q9UEE9 299 aaPredicted RBP25.21■■□□□ 1.63
LETMD1-205ENST00000546992 ZNF644Q9H582 1327 aaPredicted RBP25.2■■□□□ 1.62
LETMD1-205ENST00000546992 RRBP1Q9P2E9 1410 aaKnown RBP25.2■■□□□ 1.62
LETMD1-205ENST00000546992 ARHGEF12Q9NZN5 1544 aa25.19■■□□□ 1.62
LETMD1-205ENST00000546992 AKNAQ7Z591 1439 aa25.19■■□□□ 1.62
LETMD1-205ENST00000546992 SYCP2Q9BX26 1530 aa25.18■■□□□ 1.62
LETMD1-205ENST00000546992 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
LETMD1-205ENST00000546992 ADGRL1O94910 1474 aa25.15■■□□□ 1.62
LETMD1-205ENST00000546992 ZNF777Q9ULD5 760 aaPredicted RBP25.15■■□□□ 1.62
LETMD1-205ENST00000546992 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
LETMD1-205ENST00000546992 FRMPD1Q5SYB0 1578 aa25.14■■□□□ 1.62
LETMD1-205ENST00000546992 COL17A1Q9UMD9 1497 aaPredicted RBP25.13■■□□□ 1.61
LETMD1-205ENST00000546992 MBD5Q9P267 1494 aa25.12■■□□□ 1.61
LETMD1-205ENST00000546992 CROCC2H7BZ55 1655 aa25.11■■□□□ 1.61
LETMD1-205ENST00000546992 ARHGEF5Q12774 1597 aa25.1■■□□□ 1.61
LETMD1-205ENST00000546992 PLEKHH2Q8IVE3 1493 aa25.1■■□□□ 1.61
LETMD1-205ENST00000546992 DNMT1P26358 1616 aaKnown RBP25.1■■□□□ 1.61
LETMD1-205ENST00000546992 KIAA1107Q9UPP5 1409 aa25.1■■□□□ 1.61
LETMD1-205ENST00000546992 SCAPERQ9BY12 1400 aa25.09■■□□□ 1.61
LETMD1-205ENST00000546992 TRAPPC8Q9Y2L5 1435 aa25.09■■□□□ 1.61
LETMD1-205ENST00000546992 POGZQ7Z3K3 1410 aa25.06■■□□□ 1.6
LETMD1-205ENST00000546992 KDM6BO15054 1643 aa25.06■■□□□ 1.6
LETMD1-205ENST00000546992 HNRNPMP52272 730 aaKnown RBP eCLIP25.05■■□□□ 1.6
LETMD1-205ENST00000546992 KDM5CP41229 1560 aa25.05■■□□□ 1.6
LETMD1-205ENST00000546992 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.6
LETMD1-205ENST00000546992 DENND4BO75064 1496 aaPredicted RBP25.04■■□□□ 1.6
LETMD1-205ENST00000546992 FAM50AQ14320 339 aaKnown RBP25.03■■□□□ 1.6
LETMD1-205ENST00000546992 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
LETMD1-205ENST00000546992 ABCC5O15440 1437 aa25.02■■□□□ 1.6
LETMD1-205ENST00000546992 DAPK1P53355 1430 aa25.01■■□□□ 1.59
LETMD1-205ENST00000546992 PTPRKQ15262 1439 aa24.99■■□□□ 1.59
LETMD1-205ENST00000546992 ZMYM4Q5VZL5 1548 aa24.99■■□□□ 1.59
LETMD1-205ENST00000546992 ZNF518AQ6AHZ1 1483 aa24.99■■□□□ 1.59
LETMD1-205ENST00000546992 INO80Q9ULG1 1556 aaPredicted RBP24.99■■□□□ 1.59
LETMD1-205ENST00000546992 RAPGEF3O95398 923 aa24.98■■□□□ 1.59
LETMD1-205ENST00000546992 KIDINS220Q9ULH0 1771 aa24.98■■□□□ 1.59
LETMD1-205ENST00000546992 MAST1Q9Y2H9 1570 aa24.97■■□□□ 1.59
LETMD1-205ENST00000546992 ZFYVE16Q7Z3T8 1539 aa24.96■■□□□ 1.59
LETMD1-205ENST00000546992 AFAP1Q8N556 730 aa24.96■■□□□ 1.59
LETMD1-205ENST00000546992 HECW2Q9P2P5 1572 aa24.96■■□□□ 1.59
LETMD1-205ENST00000546992 ADGBQ8N7X0 1667 aa24.95■■□□□ 1.58
LETMD1-205ENST00000546992 SHANK2Q9UPX8 1470 aa24.95■■□□□ 1.58
LETMD1-205ENST00000546992 ATP7AQ04656 1500 aa24.91■■□□□ 1.58
LETMD1-205ENST00000546992 ABCA6Q8N139 1617 aa24.91■■□□□ 1.58
LETMD1-205ENST00000546992 C9orf84Q5VXU9 1444 aa24.91■■□□□ 1.58
LETMD1-205ENST00000546992 MLH3Q9UHC1 1453 aa24.89■■□□□ 1.58
LETMD1-205ENST00000546992 PLXNC1O60486 1568 aa24.88■■□□□ 1.57
LETMD1-205ENST00000546992 ADGRL2O95490 1459 aa24.87■■□□□ 1.57
LETMD1-205ENST00000546992 DIP2CQ9Y2E4 1556 aa24.87■■□□□ 1.57
LETMD1-205ENST00000546992 YEATS2Q9ULM3 1422 aa24.86■■□□□ 1.57
LETMD1-205ENST00000546992 ARHGEF40Q8TER5 1519 aa24.86■■□□□ 1.57
LETMD1-205ENST00000546992 ITGAEP38570 1179 aa24.86■■□□□ 1.57
LETMD1-205ENST00000546992 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
LETMD1-205ENST00000546992 RTEL1-TNFRSF6BF6WH68 1400 aa24.85■■□□□ 1.57
LETMD1-205ENST00000546992 SPAG9O60271 1321 aaKnown RBP24.85■■□□□ 1.57
LETMD1-205ENST00000546992 SIGLEC1Q9BZZ2 1709 aa24.83■■□□□ 1.57
LETMD1-205ENST00000546992 MAGI2Q86UL8 1455 aa24.83■■□□□ 1.56
LETMD1-205ENST00000546992 CHIC2Q9UKJ5 165 aa24.82■■□□□ 1.56
LETMD1-205ENST00000546992 TRIM26Q12899 539 aaPredicted RBP24.81■■□□□ 1.56
LETMD1-205ENST00000546992 GCC2Q8IWJ2 1684 aa24.8■■□□□ 1.56
LETMD1-205ENST00000546992 TSPY4P0CV99 314 aa24.79■■□□□ 1.56
LETMD1-205ENST00000546992 TSPY10P0CW01 314 aa24.79■■□□□ 1.56
LETMD1-205ENST00000546992 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
LETMD1-205ENST00000546992 ROCK1Q13464 1354 aa24.77■■□□□ 1.56
LETMD1-205ENST00000546992 ANKRD30AQ9BXX3 1397 aa24.74■■□□□ 1.55
LETMD1-205ENST00000546992 REREQ9P2R6 1566 aa24.74■■□□□ 1.55
LETMD1-205ENST00000546992 KIF15Q9NS87 1388 aa24.73■■□□□ 1.55
LETMD1-205ENST00000546992 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
LETMD1-205ENST00000546992 RRP7BPQ9NSQ0 103 aa24.71■■□□□ 1.55
LETMD1-205ENST00000546992 ATP10AO60312 1499 aa24.7■■□□□ 1.55
LETMD1-205ENST00000546992 A2MP01023 1474 aa24.7■■□□□ 1.55
LETMD1-205ENST00000546992 NAIPQ13075 1403 aa24.7■■□□□ 1.55
LETMD1-205ENST00000546992 MYT1LQ9UL68 1186 aa24.7■■□□□ 1.54
LETMD1-205ENST00000546992 HFM1A2PYH4 1435 aa24.69■■□□□ 1.54
LETMD1-205ENST00000546992 BCORL1Q5H9F3 1711 aa24.68■■□□□ 1.54
LETMD1-205ENST00000546992 EIF2AK4Q9P2K8 1649 aaKnown RBP24.67■■□□□ 1.54
LETMD1-205ENST00000546992 DHX29Q7Z478 1369 aaKnown RBP24.64■■□□□ 1.53
LETMD1-205ENST00000546992 ERBINQ96RT1 1412 aa24.63■■□□□ 1.53
LETMD1-205ENST00000546992 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
LETMD1-205ENST00000546992 AGLP35573 1532 aa24.62■■□□□ 1.53
LETMD1-205ENST00000546992 DEPDC5O75140 1603 aa24.61■■□□□ 1.53
LETMD1-205ENST00000546992 MROH1Q8NDA8 1641 aa24.61■■□□□ 1.53
LETMD1-205ENST00000546992 RNF17Q9BXT8 1623 aaKnown RBP24.61■■□□□ 1.53
LETMD1-205ENST00000546992 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
LETMD1-205ENST00000546992 UNC13BO14795 1591 aa24.58■■□□□ 1.52
LETMD1-205ENST00000546992 SETD5Q9C0A6 1442 aa24.57■■□□□ 1.52
LETMD1-205ENST00000546992 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms