RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 CEP162Q5TB80 1403 aa42.49■■■■■ 4.39
SRSF9-202ENST00000546942 POGZQ7Z3K3 1410 aa42.46■■■■■ 4.39
SRSF9-202ENST00000546942 ZMYM4Q5VZL5 1548 aa42.46■■■■■ 4.39
SRSF9-202ENST00000546942 CDC42BPBQ9Y5S2 1711 aa42.46■■■■■ 4.39
SRSF9-202ENST00000546942 LOC105371045A0A1W2PR82 267 aa42.45■■■■■ 4.39
SRSF9-202ENST00000546942 ZFYVE16Q7Z3T8 1539 aa42.43■■■■■ 4.38
SRSF9-202ENST00000546942 YEATS2Q9ULM3 1422 aa42.42■■■■■ 4.38
SRSF9-202ENST00000546942 ADAMTSL3P82987 1691 aa42.38■■■■■ 4.38
SRSF9-202ENST00000546942 BCORL1Q5H9F3 1711 aa42.38■■■■■ 4.38
SRSF9-202ENST00000546942 PREX2Q70Z35 1606 aa42.38■■■■■ 4.37
SRSF9-202ENST00000546942 MAGI2Q86UL8 1455 aa42.36■■■■■ 4.37
SRSF9-202ENST00000546942 CDC42BPAQ5VT25 1732 aa42.34■■■■■ 4.37
SRSF9-202ENST00000546942 AFAP1Q8N556 730 aa42.32■■■■■ 4.37
SRSF9-202ENST00000546942 MYT1LQ9UL68 1186 aa42.3■■■■■ 4.36
SRSF9-202ENST00000546942 ZNF518AQ6AHZ1 1483 aa42.29■■■■■ 4.36
SRSF9-202ENST00000546942 MADDQ8WXG6 1647 aa42.28■■■■■ 4.36
SRSF9-202ENST00000546942 SIGLEC1Q9BZZ2 1709 aa42.27■■■■■ 4.36
SRSF9-202ENST00000546942 MTUS2Q5JR59 1369 aa42.26■■■■■ 4.35
SRSF9-202ENST00000546942 PTPRMP28827 1452 aa42.25■■■■■ 4.35
SRSF9-202ENST00000546942 ZNF777Q9ULD5 760 aaPredicted RBP42.25■■■■■ 4.35
SRSF9-202ENST00000546942 HECW2Q9P2P5 1572 aa42.22■■■■■ 4.35
SRSF9-202ENST00000546942 MLECQ14165 292 aa42.21■■■■■ 4.35
SRSF9-202ENST00000546942 ATP10AO60312 1499 aa42.2■■■■■ 4.35
SRSF9-202ENST00000546942 ABCC1P33527 1531 aa42.2■■■■■ 4.35
SRSF9-202ENST00000546942 ARHGEF12Q9NZN5 1544 aa42.19■■■■■ 4.34
SRSF9-202ENST00000546942 ITSN2Q9NZM3 1697 aa42.19■■■■■ 4.34
SRSF9-202ENST00000546942 KDM5CP41229 1560 aa42.18■■■■■ 4.34
SRSF9-202ENST00000546942 GPATCH8Q9UKJ3 1502 aaKnown RBP42.18■■■■■ 4.34
SRSF9-202ENST00000546942 RIMS1Q86UR5 1692 aaKnown RBP42.17■■■■■ 4.34
SRSF9-202ENST00000546942 TRAPPC8Q9Y2L5 1435 aa42.16■■■■■ 4.34
SRSF9-202ENST00000546942 CCNB3Q8WWL7 1395 aa42.14■■■■■ 4.34
SRSF9-202ENST00000546942 C9orf84Q5VXU9 1444 aa42.13■■■■■ 4.34
SRSF9-202ENST00000546942 PLPPR3Q6T4P5 718 aa42.1■■■■■ 4.33
SRSF9-202ENST00000546942 CFDP1Q9UEE9 299 aaPredicted RBP42.1■■■■■ 4.33
SRSF9-202ENST00000546942 SAMD9LQ8IVG5 1584 aa42.1■■■■■ 4.33
SRSF9-202ENST00000546942 EHBP1L1Q8N3D4 1523 aa42.08■■■■■ 4.33
SRSF9-202ENST00000546942 MLH3Q9UHC1 1453 aa42.04■■■■■ 4.32
SRSF9-202ENST00000546942 HNRNPMP52272 730 aaKnown RBP eCLIP42.04■■■■■ 4.32
SRSF9-202ENST00000546942 DIP2CQ9Y2E4 1556 aa42.04■■■■■ 4.32
SRSF9-202ENST00000546942 SYCP2Q9BX26 1530 aa42.03■■■■■ 4.32
SRSF9-202ENST00000546942 ABCA6Q8N139 1617 aa42.02■■■■■ 4.32
SRSF9-202ENST00000546942 FER1L4A9Z1Z3 1794 aa42.01■■■■■ 4.32
SRSF9-202ENST00000546942 VPS8Q8N3P4 1428 aa41.99■■■■■ 4.31
SRSF9-202ENST00000546942 TIAM1Q13009 1591 aa41.97■■■■■ 4.31
SRSF9-202ENST00000546942 KIDINS220Q9ULH0 1771 aa41.96■■■■■ 4.31
SRSF9-202ENST00000546942 PLEKHH2Q8IVE3 1493 aa41.92■■■■■ 4.3
SRSF9-202ENST00000546942 SPAG9O60271 1321 aaKnown RBP41.9■■■■■ 4.3
SRSF9-202ENST00000546942 ZNF644Q9H582 1327 aaPredicted RBP41.9■■■■■ 4.3
SRSF9-202ENST00000546942 SUPT6HQ7KZ85 1726 aaKnown RBP41.89■■■■■ 4.3
SRSF9-202ENST00000546942 KIAA1107Q9UPP5 1409 aa41.89■■■■■ 4.3
SRSF9-202ENST00000546942 REREQ9P2R6 1566 aa41.88■■■■■ 4.29
SRSF9-202ENST00000546942 NCOA2Q15596 1464 aa41.85■■■■■ 4.29
SRSF9-202ENST00000546942 ATP7AQ04656 1500 aa41.78■■■■■ 4.28
SRSF9-202ENST00000546942 CEBPAP49715 358 aaPredicted RBP41.77■■■■■ 4.28
SRSF9-202ENST00000546942 LRRC9Q6ZRR7 1453 aa41.77■■■■■ 4.28
SRSF9-202ENST00000546942 AGLP35573 1532 aa41.76■■■■■ 4.28
SRSF9-202ENST00000546942 LMTK3Q96Q04 1460 aa41.75■■■■■ 4.27
SRSF9-202ENST00000546942 INO80Q9ULG1 1556 aaPredicted RBP41.73■■■■■ 4.27
SRSF9-202ENST00000546942 KANK4Q5T7N3 995 aaPredicted RBP41.72■■■■■ 4.27
SRSF9-202ENST00000546942 ESF1Q9H501 851 aaKnown RBP41.72■■■■■ 4.27
SRSF9-202ENST00000546942 MBD5Q9P267 1494 aa41.69■■■■■ 4.26
SRSF9-202ENST00000546942 HSPA2P54652 639 aa41.66■■■■■ 4.26
SRSF9-202ENST00000546942 CAMSAP2Q08AD1 1489 aa41.66■■■■■ 4.26
SRSF9-202ENST00000546942 MAP3K1Q13233 1512 aa41.64■■■■■ 4.26
SRSF9-202ENST00000546942 A2MP01023 1474 aa41.61■■■■■ 4.25
SRSF9-202ENST00000546942 APLP2Q06481 763 aa41.6■■■■■ 4.25
SRSF9-202ENST00000546942 C3P01024 1663 aa41.57■■■■■ 4.25
SRSF9-202ENST00000546942 ADGBQ8N7X0 1667 aa41.57■■■■■ 4.25
SRSF9-202ENST00000546942 CCDC141Q6ZP82 1450 aa41.55■■■■■ 4.24
SRSF9-202ENST00000546942 PREX1Q8TCU6 1659 aa41.55■■■■■ 4.24
SRSF9-202ENST00000546942 PLXNC1O60486 1568 aa41.54■■■■■ 4.24
SRSF9-202ENST00000546942 RTEL1-TNFRSF6BF6WH68 1400 aa41.52■■■■■ 4.24
SRSF9-202ENST00000546942 RSPH4AQ5TD94 716 aa41.5■■■■■ 4.23
SRSF9-202ENST00000546942 GGT6Q6P531 493 aa41.5■■■■■ 4.23
SRSF9-202ENST00000546942 CNTLNQ9NXG0 1405 aa41.48■■■■■ 4.23
SRSF9-202ENST00000546942 SETD1BQ9UPS6 1966 aaKnown RBP41.46■■■■■ 4.23
SRSF9-202ENST00000546942 ARHGEF5Q12774 1597 aa41.44■■■■■ 4.22
SRSF9-202ENST00000546942 MYOM3Q5VTT5 1437 aa41.44■■■■■ 4.22
SRSF9-202ENST00000546942 TSPY4P0CV99 314 aa41.43■■■■■ 4.22
SRSF9-202ENST00000546942 TSPY10P0CW01 314 aa41.43■■■■■ 4.22
SRSF9-202ENST00000546942 CLTCQ00610 1675 aaKnown RBP41.42■■■■■ 4.22
SRSF9-202ENST00000546942 UHRF1BP1Q6BDS2 1440 aa41.41■■■■■ 4.22
SRSF9-202ENST00000546942 DHX29Q7Z478 1369 aaKnown RBP41.39■■■■■ 4.22
SRSF9-202ENST00000546942 MROH2AA6NES4 1674 aa41.39■■■■■ 4.22
SRSF9-202ENST00000546942 ZMYM3Q14202 1370 aa41.37■■■■■ 4.21
SRSF9-202ENST00000546942 ILDR1Q86SU0 546 aaPredicted RBP41.36■■■■■ 4.21
SRSF9-202ENST00000546942 MIA2Q96PC5 1412 aa41.35■■■■■ 4.21
SRSF9-202ENST00000546942 KIF3BO15066 747 aa41.33■■■■■ 4.21
SRSF9-202ENST00000546942 PPP6R1Q9UPN7 881 aa41.26■■■■■ 4.2
SRSF9-202ENST00000546942 MAST1Q9Y2H9 1570 aa41.21■■■■■ 4.19
SRSF9-202ENST00000546942 NPATQ14207 1427 aa41.21■■■■■ 4.19
SRSF9-202ENST00000546942 PTPN23Q9H3S7 1636 aa41.21■■■■■ 4.19
SRSF9-202ENST00000546942 STRCQ7RTU9 1775 aa41.17■■■■■ 4.18
SRSF9-202ENST00000546942 PTPRKQ15262 1439 aa41.15■■■■■ 4.18
SRSF9-202ENST00000546942 FGD6Q6ZV73 1430 aa41.12■■■■■ 4.17
SRSF9-202ENST00000546942 WASHC2CQ9Y4E1 1318 aa41.12■■■■■ 4.17
SRSF9-202ENST00000546942 DMRT2Q9Y5R5 561 aa41.08■■■■■ 4.17
SRSF9-202ENST00000546942 KDM5DQ9BY66 1539 aa41.08■■■■■ 4.17
SRSF9-202ENST00000546942 ABCC5O15440 1437 aa41.07■■■■■ 4.16
SRSF9-202ENST00000546942 CROCC2H7BZ55 1655 aa41.07■■■■■ 4.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms