RNA–Protein interactions for RNA: ENST00000546842.5

NR4A1-207, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-207ENST00000546842 MAGI2Q86UL8 1455 aa47.47■■■■■ 5.19
NR4A1-207ENST00000546842 CDK11AQ9UQ88 783 aaPredicted RBP47.46■■■■■ 5.19
NR4A1-207ENST00000546842 SIGLEC1Q9BZZ2 1709 aa47.46■■■■■ 5.19
NR4A1-207ENST00000546842 KIF14Q15058 1648 aa47.45■■■■■ 5.19
NR4A1-207ENST00000546842 LRRIQ1Q96JM4 1722 aa47.41■■■■■ 5.18
NR4A1-207ENST00000546842 TROQ12816 1431 aaPredicted RBP47.39■■■■■ 5.18
NR4A1-207ENST00000546842 PCF11O94913 1555 aaKnown RBP47.37■■■■■ 5.17
NR4A1-207ENST00000546842 EFCAB2Q5VUJ9 269 aa47.37■■■■■ 5.17
NR4A1-207ENST00000546842 LMTK3Q96Q04 1460 aa47.33■■■■■ 5.17
NR4A1-207ENST00000546842 CLIP1P30622 1438 aa47.3■■■■■ 5.16
NR4A1-207ENST00000546842 ARHGAP5Q13017 1502 aa47.26■■■■■ 5.16
NR4A1-207ENST00000546842 ATP10AO60312 1499 aa47.22■■■■■ 5.15
NR4A1-207ENST00000546842 MLECQ14165 292 aa47.22■■■■■ 5.15
NR4A1-207ENST00000546842 FER1L4A9Z1Z3 1794 aa47.2■■■■■ 5.15
NR4A1-207ENST00000546842 CASKIN1Q8WXD9 1431 aa47.2■■■■■ 5.15
NR4A1-207ENST00000546842 PLPPR3Q6T4P5 718 aa47.19■■■■■ 5.14
NR4A1-207ENST00000546842 C9orf84Q5VXU9 1444 aa47.19■■■■■ 5.14
NR4A1-207ENST00000546842 ZNF518AQ6AHZ1 1483 aa47.19■■■■■ 5.14
NR4A1-207ENST00000546842 CCDC18Q5T9S5 1454 aa47.15■■■■■ 5.14
NR4A1-207ENST00000546842 KDM5CP41229 1560 aa47.14■■■■■ 5.14
NR4A1-207ENST00000546842 CDC42BPBQ9Y5S2 1711 aa47.13■■■■■ 5.14
NR4A1-207ENST00000546842 ARHGEF12Q9NZN5 1544 aa47.1■■■■■ 5.13
NR4A1-207ENST00000546842 AFAP1Q8N556 730 aa47.1■■■■■ 5.13
NR4A1-207ENST00000546842 PREX2Q70Z35 1606 aa47.07■■■■■ 5.13
NR4A1-207ENST00000546842 HSPA2P54652 639 aa47.04■■■■■ 5.12
NR4A1-207ENST00000546842 FYCO1Q9BQS8 1478 aa47.01■■■■■ 5.12
NR4A1-207ENST00000546842 DIP2CQ9Y2E4 1556 aa46.99■■■■■ 5.11
NR4A1-207ENST00000546842 ABCC1P33527 1531 aa46.98■■■■■ 5.11
NR4A1-207ENST00000546842 FBXO41Q8TF61 875 aa46.97■■■■■ 5.11
NR4A1-207ENST00000546842 MYT1LQ9UL68 1186 aa46.96■■■■■ 5.11
NR4A1-207ENST00000546842 TRAPPC8Q9Y2L5 1435 aa46.93■■■■■ 5.1
NR4A1-207ENST00000546842 ABCA6Q8N139 1617 aa46.93■■■■■ 5.1
NR4A1-207ENST00000546842 CDC42BPAQ5VT25 1732 aa46.92■■■■■ 5.1
NR4A1-207ENST00000546842 ITSN2Q9NZM3 1697 aa46.92■■■■■ 5.1
NR4A1-207ENST00000546842 MLH3Q9UHC1 1453 aa46.92■■■■■ 5.1
NR4A1-207ENST00000546842 REREQ9P2R6 1566 aa46.9■■■■■ 5.1
NR4A1-207ENST00000546842 CEBPAP49715 358 aaPredicted RBP46.84■■■■■ 5.09
NR4A1-207ENST00000546842 PREX1Q8TCU6 1659 aa46.82■■■■■ 5.09
NR4A1-207ENST00000546842 KIDINS220Q9ULH0 1771 aa46.77■■■■■ 5.08
NR4A1-207ENST00000546842 AGLP35573 1532 aa46.75■■■■■ 5.07
NR4A1-207ENST00000546842 SAMD9LQ8IVG5 1584 aa46.73■■■■■ 5.07
NR4A1-207ENST00000546842 GPATCH8Q9UKJ3 1502 aaKnown RBP46.71■■■■■ 5.07
NR4A1-207ENST00000546842 ZNF777Q9ULD5 760 aaPredicted RBP46.7■■■■■ 5.07
NR4A1-207ENST00000546842 SYCP2Q9BX26 1530 aa46.67■■■■■ 5.06
NR4A1-207ENST00000546842 SETD1BQ9UPS6 1966 aaKnown RBP46.65■■■■■ 5.06
NR4A1-207ENST00000546842 C3P01024 1663 aa46.63■■■■■ 5.06
NR4A1-207ENST00000546842 UHRF1BP1Q6BDS2 1440 aa46.61■■■■■ 5.05
NR4A1-207ENST00000546842 HNRNPMP52272 730 aaKnown RBP eCLIP46.56■■■■■ 5.04
NR4A1-207ENST00000546842 ESF1Q9H501 851 aaKnown RBP46.56■■■■■ 5.04
NR4A1-207ENST00000546842 MTUS2Q5JR59 1369 aa46.54■■■■■ 5.04
NR4A1-207ENST00000546842 CCNB3Q8WWL7 1395 aa46.54■■■■■ 5.04
NR4A1-207ENST00000546842 SPAG9O60271 1321 aaKnown RBP46.54■■■■■ 5.04
NR4A1-207ENST00000546842 CFDP1Q9UEE9 299 aaPredicted RBP46.53■■■■■ 5.04
NR4A1-207ENST00000546842 STRCQ7RTU9 1775 aa46.52■■■■■ 5.04
NR4A1-207ENST00000546842 KIAA1107Q9UPP5 1409 aa46.52■■■■■ 5.04
NR4A1-207ENST00000546842 PLEKHH2Q8IVE3 1493 aa46.5■■■■■ 5.03
NR4A1-207ENST00000546842 CNTLNQ9NXG0 1405 aa46.48■■■■■ 5.03
NR4A1-207ENST00000546842 CERKQ8TCT0 537 aa46.48■■■■■ 5.03
NR4A1-207ENST00000546842 ATP7AQ04656 1500 aa46.48■■■■■ 5.03
NR4A1-207ENST00000546842 INO80Q9ULG1 1556 aaPredicted RBP46.44■■■■■ 5.03
NR4A1-207ENST00000546842 SUPT6HQ7KZ85 1726 aaKnown RBP46.43■■■■■ 5.02
NR4A1-207ENST00000546842 TIAM1Q13009 1591 aa46.4■■■■■ 5.02
NR4A1-207ENST00000546842 EHBP1L1Q8N3D4 1523 aa46.39■■■■■ 5.02
NR4A1-207ENST00000546842 CEP162Q5TB80 1403 aa46.38■■■■■ 5.02
NR4A1-207ENST00000546842 DMRT2Q9Y5R5 561 aa46.38■■■■■ 5.02
NR4A1-207ENST00000546842 PLXNC1O60486 1568 aa46.37■■■■■ 5.01
NR4A1-207ENST00000546842 MROH2AA6NES4 1674 aa46.36■■■■■ 5.01
NR4A1-207ENST00000546842 A2MP01023 1474 aa46.33■■■■■ 5.01
NR4A1-207ENST00000546842 ZNF644Q9H582 1327 aaPredicted RBP46.3■■■■■ 5
NR4A1-207ENST00000546842 ZMYM3Q14202 1370 aa46.27■■■■■ 5
NR4A1-207ENST00000546842 NPATQ14207 1427 aa46.27■■■■■ 5
NR4A1-207ENST00000546842 MBD5Q9P267 1494 aa46.24■■■■■ 4.99
NR4A1-207ENST00000546842 CLTCQ00610 1675 aaKnown RBP46.23■■■■■ 4.99
NR4A1-207ENST00000546842 PTPRTO14522 1441 aa46.23■■■■■ 4.99
NR4A1-207ENST00000546842 ADGBQ8N7X0 1667 aa46.23■■■■■ 4.99
NR4A1-207ENST00000546842 NCOA1Q15788 1441 aa46.19■■■■■ 4.98
NR4A1-207ENST00000546842 GGT6Q6P531 493 aa46.15■■■■■ 4.98
NR4A1-207ENST00000546842 NCOA2Q15596 1464 aa46.11■■■■■ 4.97
NR4A1-207ENST00000546842 RTEL1-TNFRSF6BF6WH68 1400 aa46.11■■■■■ 4.97
NR4A1-207ENST00000546842 CAMSAP1Q5T5Y3 1602 aa46.1■■■■■ 4.97
NR4A1-207ENST00000546842 PTPRKQ15262 1439 aa46.07■■■■■ 4.97
NR4A1-207ENST00000546842 MYO3AQ8NEV4 1616 aa46.06■■■■■ 4.96
NR4A1-207ENST00000546842 PPP6R1Q9UPN7 881 aa46.03■■■■■ 4.96
NR4A1-207ENST00000546842 CAMSAP2Q08AD1 1489 aa46.03■■■■■ 4.96
NR4A1-207ENST00000546842 ZNF142P52746 1687 aaPredicted RBP46.03■■■■■ 4.96
NR4A1-207ENST00000546842 CCDC141Q6ZP82 1450 aa46.02■■■■■ 4.96
NR4A1-207ENST00000546842 DHX29Q7Z478 1369 aaKnown RBP46■■■■■ 4.95
NR4A1-207ENST00000546842 LTBP4Q8N2S1 1624 aa45.99■■■■■ 4.95
NR4A1-207ENST00000546842 CEP170BQ9Y4F5 1589 aaPredicted RBP45.96■■■■■ 4.95
NR4A1-207ENST00000546842 NCKAP5LQ9HCH0 1330 aa45.92■■■■■ 4.94
NR4A1-207ENST00000546842 VPS8Q8N3P4 1428 aa45.9■■■■■ 4.94
NR4A1-207ENST00000546842 PLA2R1Q13018 1463 aa45.89■■■■■ 4.94
NR4A1-207ENST00000546842 RSPH4AQ5TD94 716 aa45.88■■■■■ 4.94
NR4A1-207ENST00000546842 LOC105371045A0A1W2PR82 267 aa45.87■■■■■ 4.93
NR4A1-207ENST00000546842 KIF3BO15066 747 aa45.86■■■■■ 4.93
NR4A1-207ENST00000546842 ARHGEF5Q12774 1597 aa45.85■■■■■ 4.93
NR4A1-207ENST00000546842 LRRC9Q6ZRR7 1453 aa45.85■■■■■ 4.93
NR4A1-207ENST00000546842 TCOF1Q13428 1488 aaKnown RBP45.82■■■■■ 4.93
NR4A1-207ENST00000546842 PKD2Q13563 968 aa45.81■■■■■ 4.92
NR4A1-207ENST00000546842 IQSEC2Q5JU85 1478 aa45.8■■■■■ 4.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms