RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 POGZQ7Z3K3 1410 aa24.65■■□□□ 1.54
SSH1-204ENST00000546697 CDC42BPBQ9Y5S2 1711 aa24.64■■□□□ 1.54
SSH1-204ENST00000546697 LOC105371045A0A1W2PR82 267 aa24.64■■□□□ 1.54
SSH1-204ENST00000546697 ARHGEF40Q8TER5 1519 aa24.63■■□□□ 1.53
SSH1-204ENST00000546697 SCAPERQ9BY12 1400 aa24.61■■□□□ 1.53
SSH1-204ENST00000546697 ARHGAP5Q13017 1502 aa24.6■■□□□ 1.53
SSH1-204ENST00000546697 CDC42BPAQ5VT25 1732 aa24.59■■□□□ 1.53
SSH1-204ENST00000546697 VPS8Q8N3P4 1428 aa24.59■■□□□ 1.53
SSH1-204ENST00000546697 KDM5CP41229 1560 aa24.59■■□□□ 1.53
SSH1-204ENST00000546697 EHBP1L1Q8N3D4 1523 aa24.56■■□□□ 1.52
SSH1-204ENST00000546697 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
SSH1-204ENST00000546697 ZNF518AQ6AHZ1 1483 aa24.56■■□□□ 1.52
SSH1-204ENST00000546697 ABCC1P33527 1531 aa24.55■■□□□ 1.52
SSH1-204ENST00000546697 MAP3K1Q13233 1512 aa24.54■■□□□ 1.52
SSH1-204ENST00000546697 ZFYVE16Q7Z3T8 1539 aa24.53■■□□□ 1.52
SSH1-204ENST00000546697 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
SSH1-204ENST00000546697 ADAMTSL3P82987 1691 aa24.51■■□□□ 1.51
SSH1-204ENST00000546697 YEATS2Q9ULM3 1422 aa24.5■■□□□ 1.51
SSH1-204ENST00000546697 ARHGEF12Q9NZN5 1544 aa24.5■■□□□ 1.51
SSH1-204ENST00000546697 TIAM1Q13009 1591 aa24.5■■□□□ 1.51
SSH1-204ENST00000546697 MLH3Q9UHC1 1453 aa24.49■■□□□ 1.51
SSH1-204ENST00000546697 BCORL1Q5H9F3 1711 aa24.47■■□□□ 1.51
SSH1-204ENST00000546697 ITSN2Q9NZM3 1697 aa24.47■■□□□ 1.51
SSH1-204ENST00000546697 KIAA1107Q9UPP5 1409 aa24.47■■□□□ 1.51
SSH1-204ENST00000546697 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
SSH1-204ENST00000546697 REREQ9P2R6 1566 aa24.45■■□□□ 1.5
SSH1-204ENST00000546697 HECW2Q9P2P5 1572 aa24.44■■□□□ 1.5
SSH1-204ENST00000546697 ATP10AO60312 1499 aa24.44■■□□□ 1.5
SSH1-204ENST00000546697 PLEKHH2Q8IVE3 1493 aa24.44■■□□□ 1.5
SSH1-204ENST00000546697 CCNB3Q8WWL7 1395 aa24.43■■□□□ 1.5
SSH1-204ENST00000546697 SIGLEC1Q9BZZ2 1709 aa24.43■■□□□ 1.5
SSH1-204ENST00000546697 TRAPPC8Q9Y2L5 1435 aa24.43■■□□□ 1.5
SSH1-204ENST00000546697 AFAP1Q8N556 730 aa24.41■■□□□ 1.5
SSH1-204ENST00000546697 LRRC9Q6ZRR7 1453 aa24.4■■□□□ 1.5
SSH1-204ENST00000546697 C9orf84Q5VXU9 1444 aa24.4■■□□□ 1.5
SSH1-204ENST00000546697 SUPT6HQ7KZ85 1726 aaKnown RBP24.39■■□□□ 1.5
SSH1-204ENST00000546697 DIP2CQ9Y2E4 1556 aa24.38■■□□□ 1.49
SSH1-204ENST00000546697 NCOA2Q15596 1464 aa24.38■■□□□ 1.49
SSH1-204ENST00000546697 SYCP2Q9BX26 1530 aa24.36■■□□□ 1.49
SSH1-204ENST00000546697 CFDP1Q9UEE9 299 aaPredicted RBP24.36■■□□□ 1.49
SSH1-204ENST00000546697 KIDINS220Q9ULH0 1771 aa24.35■■□□□ 1.49
SSH1-204ENST00000546697 PTPRMP28827 1452 aa24.34■■□□□ 1.49
SSH1-204ENST00000546697 ABCA6Q8N139 1617 aa24.34■■□□□ 1.49
SSH1-204ENST00000546697 AGLP35573 1532 aa24.34■■□□□ 1.49
SSH1-204ENST00000546697 MBD5Q9P267 1494 aa24.33■■□□□ 1.49
SSH1-204ENST00000546697 MADDQ8WXG6 1647 aa24.33■■□□□ 1.49
SSH1-204ENST00000546697 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
SSH1-204ENST00000546697 ARID4BQ4LE39 1312 aaPredicted RBP24.28■■□□□ 1.48
SSH1-204ENST00000546697 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.47
SSH1-204ENST00000546697 ZNF777Q9ULD5 760 aaPredicted RBP24.25■■□□□ 1.47
SSH1-204ENST00000546697 RTEL1-TNFRSF6BF6WH68 1400 aa24.25■■□□□ 1.47
SSH1-204ENST00000546697 ATP7AQ04656 1500 aa24.25■■□□□ 1.47
SSH1-204ENST00000546697 KANK4Q5T7N3 995 aaPredicted RBP24.24■■□□□ 1.47
SSH1-204ENST00000546697 ZNF644Q9H582 1327 aaPredicted RBP24.23■■□□□ 1.47
SSH1-204ENST00000546697 PLXNC1O60486 1568 aa24.23■■□□□ 1.47
SSH1-204ENST00000546697 CAMSAP2Q08AD1 1489 aa24.22■■□□□ 1.47
SSH1-204ENST00000546697 MIA2Q96PC5 1412 aa24.22■■□□□ 1.47
SSH1-204ENST00000546697 SPAG9O60271 1321 aaKnown RBP24.22■■□□□ 1.47
SSH1-204ENST00000546697 ARHGEF5Q12774 1597 aa24.21■■□□□ 1.47
SSH1-204ENST00000546697 RSPH4AQ5TD94 716 aa24.21■■□□□ 1.47
SSH1-204ENST00000546697 RIMS1Q86UR5 1692 aaKnown RBP24.21■■□□□ 1.47
SSH1-204ENST00000546697 FER1L4A9Z1Z3 1794 aa24.19■■□□□ 1.46
SSH1-204ENST00000546697 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
SSH1-204ENST00000546697 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
SSH1-204ENST00000546697 ADGBQ8N7X0 1667 aa24.14■■□□□ 1.45
SSH1-204ENST00000546697 A2MP01023 1474 aa24.13■■□□□ 1.45
SSH1-204ENST00000546697 MAST1Q9Y2H9 1570 aa24.11■■□□□ 1.45
SSH1-204ENST00000546697 MYT1LQ9UL68 1186 aa24.09■■□□□ 1.45
SSH1-204ENST00000546697 APLP2Q06481 763 aa24.08■■□□□ 1.45
SSH1-204ENST00000546697 CNTLNQ9NXG0 1405 aa24.08■■□□□ 1.44
SSH1-204ENST00000546697 LMTK3Q96Q04 1460 aa24.07■■□□□ 1.44
SSH1-204ENST00000546697 DHX29Q7Z478 1369 aaKnown RBP24.06■■□□□ 1.44
SSH1-204ENST00000546697 MLECQ14165 292 aa24.06■■□□□ 1.44
SSH1-204ENST00000546697 TCOF1Q13428 1488 aaKnown RBP24.05■■□□□ 1.44
SSH1-204ENST00000546697 PPP6R1Q9UPN7 881 aa24.04■■□□□ 1.44
SSH1-204ENST00000546697 MROH2AA6NES4 1674 aa24.04■■□□□ 1.44
SSH1-204ENST00000546697 FAM135AQ9P2D6 1515 aa24.02■■□□□ 1.44
SSH1-204ENST00000546697 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
SSH1-204ENST00000546697 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
SSH1-204ENST00000546697 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
SSH1-204ENST00000546697 C3P01024 1663 aa23.99■■□□□ 1.43
SSH1-204ENST00000546697 TSPY4P0CV99 314 aa23.98■■□□□ 1.43
SSH1-204ENST00000546697 TSPY10P0CW01 314 aa23.98■■□□□ 1.43
SSH1-204ENST00000546697 SETD1BQ9UPS6 1966 aaKnown RBP23.98■■□□□ 1.43
SSH1-204ENST00000546697 PREX1Q8TCU6 1659 aa23.95■■□□□ 1.43
SSH1-204ENST00000546697 CROCC2H7BZ55 1655 aa23.95■■□□□ 1.42
SSH1-204ENST00000546697 NPATQ14207 1427 aa23.94■■□□□ 1.42
SSH1-204ENST00000546697 DNMT1P26358 1616 aaKnown RBP23.94■■□□□ 1.42
SSH1-204ENST00000546697 ABCC5O15440 1437 aa23.93■■□□□ 1.42
SSH1-204ENST00000546697 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
SSH1-204ENST00000546697 CEBPAP49715 358 aaPredicted RBP23.91■■□□□ 1.42
SSH1-204ENST00000546697 ZMYM3Q14202 1370 aa23.91■■□□□ 1.42
SSH1-204ENST00000546697 RNF17Q9BXT8 1623 aaKnown RBP23.9■■□□□ 1.42
SSH1-204ENST00000546697 DAPK1P53355 1430 aa23.9■■□□□ 1.42
SSH1-204ENST00000546697 ESF1Q9H501 851 aaKnown RBP23.88■■□□□ 1.41
SSH1-204ENST00000546697 CLTCQ00610 1675 aaKnown RBP23.88■■□□□ 1.41
SSH1-204ENST00000546697 DUOX2Q9NRD8 1548 aa23.87■■□□□ 1.41
SSH1-204ENST00000546697 UHRF1BP1Q6BDS2 1440 aa23.85■■□□□ 1.41
SSH1-204ENST00000546697 KDM5DQ9BY66 1539 aa23.85■■□□□ 1.41
SSH1-204ENST00000546697 PTPRKQ15262 1439 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms