RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 PREX2Q70Z35 1606 aa20.75■□□□□ 0.91
LINC00661-201ENST00000546512 MTUS2Q5JR59 1369 aa20.75■□□□□ 0.91
LINC00661-201ENST00000546512 POGZQ7Z3K3 1410 aa20.75■□□□□ 0.91
LINC00661-201ENST00000546512 ZMYM4Q5VZL5 1548 aa20.74■□□□□ 0.91
LINC00661-201ENST00000546512 CDC42BPBQ9Y5S2 1711 aa20.74■□□□□ 0.91
LINC00661-201ENST00000546512 ARHGEF40Q8TER5 1519 aa20.73■□□□□ 0.91
LINC00661-201ENST00000546512 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
LINC00661-201ENST00000546512 CDC42BPAQ5VT25 1732 aa20.7■□□□□ 0.9
LINC00661-201ENST00000546512 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.9
LINC00661-201ENST00000546512 MAGI2Q86UL8 1455 aa20.69■□□□□ 0.9
LINC00661-201ENST00000546512 ZFYVE16Q7Z3T8 1539 aa20.69■□□□□ 0.9
LINC00661-201ENST00000546512 YEATS2Q9ULM3 1422 aa20.68■□□□□ 0.9
LINC00661-201ENST00000546512 ZNF518AQ6AHZ1 1483 aa20.68■□□□□ 0.9
LINC00661-201ENST00000546512 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
LINC00661-201ENST00000546512 ARID4BQ4LE39 1312 aaPredicted RBP20.66■□□□□ 0.9
LINC00661-201ENST00000546512 CCNB3Q8WWL7 1395 aa20.66■□□□□ 0.9
LINC00661-201ENST00000546512 ABCC1P33527 1531 aa20.66■□□□□ 0.9
LINC00661-201ENST00000546512 AFAP1Q8N556 730 aa20.64■□□□□ 0.89
LINC00661-201ENST00000546512 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
LINC00661-201ENST00000546512 KDM5CP41229 1560 aa20.63■□□□□ 0.89
LINC00661-201ENST00000546512 TIAM1Q13009 1591 aa20.63■□□□□ 0.89
LINC00661-201ENST00000546512 ARHGEF12Q9NZN5 1544 aa20.63■□□□□ 0.89
LINC00661-201ENST00000546512 ITSN2Q9NZM3 1697 aa20.62■□□□□ 0.89
LINC00661-201ENST00000546512 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
LINC00661-201ENST00000546512 SAMD9LQ8IVG5 1584 aa20.61■□□□□ 0.89
LINC00661-201ENST00000546512 TRAPPC8Q9Y2L5 1435 aa20.61■□□□□ 0.89
LINC00661-201ENST00000546512 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
LINC00661-201ENST00000546512 BCORL1Q5H9F3 1711 aa20.59■□□□□ 0.89
LINC00661-201ENST00000546512 ADAMTSL3P82987 1691 aa20.59■□□□□ 0.89
LINC00661-201ENST00000546512 HECW2Q9P2P5 1572 aa20.59■□□□□ 0.89
LINC00661-201ENST00000546512 ATP10AO60312 1499 aa20.58■□□□□ 0.89
LINC00661-201ENST00000546512 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.88
LINC00661-201ENST00000546512 SYCP2Q9BX26 1530 aa20.58■□□□□ 0.88
LINC00661-201ENST00000546512 NCOA2Q15596 1464 aa20.56■□□□□ 0.88
LINC00661-201ENST00000546512 SIGLEC1Q9BZZ2 1709 aa20.56■□□□□ 0.88
LINC00661-201ENST00000546512 C9orf84Q5VXU9 1444 aa20.56■□□□□ 0.88
LINC00661-201ENST00000546512 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
LINC00661-201ENST00000546512 PLEKHH2Q8IVE3 1493 aa20.56■□□□□ 0.88
LINC00661-201ENST00000546512 MLH3Q9UHC1 1453 aa20.56■□□□□ 0.88
LINC00661-201ENST00000546512 MAP3K1Q13233 1512 aa20.55■□□□□ 0.88
LINC00661-201ENST00000546512 HNRNPMP52272 730 aaKnown RBP eCLIP20.54■□□□□ 0.88
LINC00661-201ENST00000546512 KIAA1107Q9UPP5 1409 aa20.53■□□□□ 0.88
LINC00661-201ENST00000546512 MADDQ8WXG6 1647 aa20.53■□□□□ 0.88
LINC00661-201ENST00000546512 DIP2CQ9Y2E4 1556 aa20.53■□□□□ 0.88
LINC00661-201ENST00000546512 ABCA6Q8N139 1617 aa20.52■□□□□ 0.88
LINC00661-201ENST00000546512 PTPRMP28827 1452 aa20.51■□□□□ 0.87
LINC00661-201ENST00000546512 KANK4Q5T7N3 995 aaPredicted RBP20.51■□□□□ 0.87
LINC00661-201ENST00000546512 ZNF644Q9H582 1327 aaPredicted RBP20.51■□□□□ 0.87
LINC00661-201ENST00000546512 MLECQ14165 292 aa20.5■□□□□ 0.87
LINC00661-201ENST00000546512 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
LINC00661-201ENST00000546512 KIDINS220Q9ULH0 1771 aa20.49■□□□□ 0.87
LINC00661-201ENST00000546512 APLP2Q06481 763 aa20.48■□□□□ 0.87
LINC00661-201ENST00000546512 REREQ9P2R6 1566 aa20.47■□□□□ 0.87
LINC00661-201ENST00000546512 RIMS1Q86UR5 1692 aaKnown RBP20.47■□□□□ 0.87
LINC00661-201ENST00000546512 CAMSAP2Q08AD1 1489 aa20.44■□□□□ 0.86
LINC00661-201ENST00000546512 MBD5Q9P267 1494 aa20.44■□□□□ 0.86
LINC00661-201ENST00000546512 ATP7AQ04656 1500 aa20.44■□□□□ 0.86
LINC00661-201ENST00000546512 INO80Q9ULG1 1556 aaPredicted RBP20.43■□□□□ 0.86
LINC00661-201ENST00000546512 FER1L4A9Z1Z3 1794 aa20.41■□□□□ 0.86
LINC00661-201ENST00000546512 AGLP35573 1532 aa20.41■□□□□ 0.86
LINC00661-201ENST00000546512 CCDC141Q6ZP82 1450 aa20.38■□□□□ 0.85
LINC00661-201ENST00000546512 MYOM3Q5VTT5 1437 aa20.38■□□□□ 0.85
LINC00661-201ENST00000546512 PLPPR3Q6T4P5 718 aa20.38■□□□□ 0.85
LINC00661-201ENST00000546512 RSPH4AQ5TD94 716 aa20.36■□□□□ 0.85
LINC00661-201ENST00000546512 RTEL1-TNFRSF6BF6WH68 1400 aa20.36■□□□□ 0.85
LINC00661-201ENST00000546512 A2MP01023 1474 aa20.35■□□□□ 0.85
LINC00661-201ENST00000546512 MIA2Q96PC5 1412 aa20.35■□□□□ 0.85
LINC00661-201ENST00000546512 ARHGEF5Q12774 1597 aa20.34■□□□□ 0.85
LINC00661-201ENST00000546512 PLXNC1O60486 1568 aa20.33■□□□□ 0.84
LINC00661-201ENST00000546512 ADGBQ8N7X0 1667 aa20.32■□□□□ 0.84
LINC00661-201ENST00000546512 ESF1Q9H501 851 aaKnown RBP20.31■□□□□ 0.84
LINC00661-201ENST00000546512 TSPY4P0CV99 314 aa20.29■□□□□ 0.84
LINC00661-201ENST00000546512 TSPY10P0CW01 314 aa20.29■□□□□ 0.84
LINC00661-201ENST00000546512 CEBPAP49715 358 aaPredicted RBP20.29■□□□□ 0.84
LINC00661-201ENST00000546512 LMTK3Q96Q04 1460 aa20.26■□□□□ 0.83
LINC00661-201ENST00000546512 DHX29Q7Z478 1369 aaKnown RBP20.26■□□□□ 0.83
LINC00661-201ENST00000546512 CNTLNQ9NXG0 1405 aa20.26■□□□□ 0.83
LINC00661-201ENST00000546512 PTPN23Q9H3S7 1636 aa20.25■□□□□ 0.83
LINC00661-201ENST00000546512 GGT6Q6P531 493 aa20.24■□□□□ 0.83
LINC00661-201ENST00000546512 FGD6Q6ZV73 1430 aa20.24■□□□□ 0.83
LINC00661-201ENST00000546512 MAST1Q9Y2H9 1570 aa20.23■□□□□ 0.83
LINC00661-201ENST00000546512 C3P01024 1663 aa20.22■□□□□ 0.83
LINC00661-201ENST00000546512 TCOF1Q13428 1488 aaKnown RBP20.2■□□□□ 0.82
LINC00661-201ENST00000546512 KIF3BO15066 747 aa20.19■□□□□ 0.82
LINC00661-201ENST00000546512 MROH2AA6NES4 1674 aa20.19■□□□□ 0.82
LINC00661-201ENST00000546512 CLTCQ00610 1675 aaKnown RBP20.18■□□□□ 0.82
LINC00661-201ENST00000546512 PREX1Q8TCU6 1659 aa20.18■□□□□ 0.82
LINC00661-201ENST00000546512 HSPA2P54652 639 aa20.17■□□□□ 0.82
LINC00661-201ENST00000546512 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
LINC00661-201ENST00000546512 ABCC5O15440 1437 aa20.17■□□□□ 0.82
LINC00661-201ENST00000546512 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
LINC00661-201ENST00000546512 DAPK1P53355 1430 aa20.16■□□□□ 0.82
LINC00661-201ENST00000546512 SHANK2Q9UPX8 1470 aa20.16■□□□□ 0.82
LINC00661-201ENST00000546512 CROCC2H7BZ55 1655 aa20.16■□□□□ 0.82
LINC00661-201ENST00000546512 DNMT1P26358 1616 aaKnown RBP20.15■□□□□ 0.82
LINC00661-201ENST00000546512 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.81
LINC00661-201ENST00000546512 SETD1BQ9UPS6 1966 aaKnown RBP20.12■□□□□ 0.81
LINC00661-201ENST00000546512 NPATQ14207 1427 aa20.11■□□□□ 0.81
LINC00661-201ENST00000546512 FAM50AQ14320 339 aaKnown RBP20.11■□□□□ 0.81
LINC00661-201ENST00000546512 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms