RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 POGZQ7Z3K3 1410 aa30.65■■■□□ 2.5
CHPT1-202ENST00000546490 PTPRMP28827 1452 aa30.65■■■□□ 2.5
CHPT1-202ENST00000546490 MAGI2Q86UL8 1455 aa30.64■■■□□ 2.5
CHPT1-202ENST00000546490 ARID4BQ4LE39 1312 aaPredicted RBP30.64■■■□□ 2.5
CHPT1-202ENST00000546490 CASKIN1Q8WXD9 1431 aa30.63■■■□□ 2.49
CHPT1-202ENST00000546490 SCAPERQ9BY12 1400 aa30.62■■■□□ 2.49
CHPT1-202ENST00000546490 RIMS1Q86UR5 1692 aaKnown RBP30.61■■■□□ 2.49
CHPT1-202ENST00000546490 ARHGAP5Q13017 1502 aa30.6■■■□□ 2.49
CHPT1-202ENST00000546490 SIGLEC1Q9BZZ2 1709 aa30.59■■■□□ 2.49
CHPT1-202ENST00000546490 FYCO1Q9BQS8 1478 aa30.58■■■□□ 2.49
CHPT1-202ENST00000546490 CDC42BPBQ9Y5S2 1711 aa30.58■■■□□ 2.49
CHPT1-202ENST00000546490 PREX2Q70Z35 1606 aa30.58■■■□□ 2.49
CHPT1-202ENST00000546490 YEATS2Q9ULM3 1422 aa30.57■■■□□ 2.48
CHPT1-202ENST00000546490 EFCAB2Q5VUJ9 269 aa30.55■■■□□ 2.48
CHPT1-202ENST00000546490 ZNF518AQ6AHZ1 1483 aa30.52■■■□□ 2.48
CHPT1-202ENST00000546490 FER1L4A9Z1Z3 1794 aa30.52■■■□□ 2.48
CHPT1-202ENST00000546490 KDM5CP41229 1560 aa30.5■■■□□ 2.47
CHPT1-202ENST00000546490 CDC42BPAQ5VT25 1732 aa30.49■■■□□ 2.47
CHPT1-202ENST00000546490 ITSN2Q9NZM3 1697 aa30.46■■■□□ 2.47
CHPT1-202ENST00000546490 C9orf84Q5VXU9 1444 aa30.45■■■□□ 2.46
CHPT1-202ENST00000546490 ABCC1P33527 1531 aa30.44■■■□□ 2.46
CHPT1-202ENST00000546490 ATP10AO60312 1499 aa30.44■■■□□ 2.46
CHPT1-202ENST00000546490 DIP2CQ9Y2E4 1556 aa30.38■■■□□ 2.45
CHPT1-202ENST00000546490 ARHGEF12Q9NZN5 1544 aa30.37■■■□□ 2.45
CHPT1-202ENST00000546490 ABCA6Q8N139 1617 aa30.36■■■□□ 2.45
CHPT1-202ENST00000546490 LMTK3Q96Q04 1460 aa30.36■■■□□ 2.45
CHPT1-202ENST00000546490 REREQ9P2R6 1566 aa30.35■■■□□ 2.45
CHPT1-202ENST00000546490 MLH3Q9UHC1 1453 aa30.31■■■□□ 2.44
CHPT1-202ENST00000546490 MLECQ14165 292 aa30.31■■■□□ 2.44
CHPT1-202ENST00000546490 AFAP1Q8N556 730 aa30.31■■■□□ 2.44
CHPT1-202ENST00000546490 SAMD9LQ8IVG5 1584 aa30.28■■■□□ 2.44
CHPT1-202ENST00000546490 MYT1LQ9UL68 1186 aa30.27■■■□□ 2.44
CHPT1-202ENST00000546490 KIDINS220Q9ULH0 1771 aa30.27■■■□□ 2.44
CHPT1-202ENST00000546490 TRAPPC8Q9Y2L5 1435 aa30.27■■■□□ 2.44
CHPT1-202ENST00000546490 SYCP2Q9BX26 1530 aa30.24■■■□□ 2.43
CHPT1-202ENST00000546490 ILDR1Q86SU0 546 aaPredicted RBP30.24■■■□□ 2.43
CHPT1-202ENST00000546490 PREX1Q8TCU6 1659 aa30.23■■■□□ 2.43
CHPT1-202ENST00000546490 GPATCH8Q9UKJ3 1502 aaKnown RBP30.23■■■□□ 2.43
CHPT1-202ENST00000546490 PLPPR3Q6T4P5 718 aa30.23■■■□□ 2.43
CHPT1-202ENST00000546490 CEP162Q5TB80 1403 aa30.22■■■□□ 2.43
CHPT1-202ENST00000546490 EHBP1L1Q8N3D4 1523 aa30.21■■■□□ 2.43
CHPT1-202ENST00000546490 MTUS2Q5JR59 1369 aa30.2■■■□□ 2.43
CHPT1-202ENST00000546490 AGLP35573 1532 aa30.2■■■□□ 2.42
CHPT1-202ENST00000546490 PLEKHH2Q8IVE3 1493 aa30.16■■■□□ 2.42
CHPT1-202ENST00000546490 TIAM1Q13009 1591 aa30.15■■■□□ 2.42
CHPT1-202ENST00000546490 CCNB3Q8WWL7 1395 aa30.15■■■□□ 2.42
CHPT1-202ENST00000546490 ZNF777Q9ULD5 760 aaPredicted RBP30.14■■■□□ 2.42
CHPT1-202ENST00000546490 C3P01024 1663 aa30.13■■■□□ 2.41
CHPT1-202ENST00000546490 INO80Q9ULG1 1556 aaPredicted RBP30.12■■■□□ 2.41
CHPT1-202ENST00000546490 ATP7AQ04656 1500 aa30.11■■■□□ 2.41
CHPT1-202ENST00000546490 KIAA1107Q9UPP5 1409 aa30.1■■■□□ 2.41
CHPT1-202ENST00000546490 CFDP1Q9UEE9 299 aaPredicted RBP30.08■■■□□ 2.41
CHPT1-202ENST00000546490 SUPT6HQ7KZ85 1726 aaKnown RBP30.08■■■□□ 2.41
CHPT1-202ENST00000546490 HSPA2P54652 639 aa30.07■■■□□ 2.4
CHPT1-202ENST00000546490 SETD1BQ9UPS6 1966 aaKnown RBP30.06■■■□□ 2.4
CHPT1-202ENST00000546490 SPAG9O60271 1321 aaKnown RBP30.04■■■□□ 2.4
CHPT1-202ENST00000546490 MROH2AA6NES4 1674 aa30.03■■■□□ 2.4
CHPT1-202ENST00000546490 PLXNC1O60486 1568 aa30.03■■■□□ 2.4
CHPT1-202ENST00000546490 ADGBQ8N7X0 1667 aa30.02■■■□□ 2.4
CHPT1-202ENST00000546490 HNRNPMP52272 730 aaKnown RBP eCLIP30.02■■■□□ 2.49e-7■■■■■ 28.4
CHPT1-202ENST00000546490 CEBPAP49715 358 aaPredicted RBP30.01■■■□□ 2.39
CHPT1-202ENST00000546490 UHRF1BP1Q6BDS2 1440 aa30■■■□□ 2.39
CHPT1-202ENST00000546490 CNTLNQ9NXG0 1405 aa30■■■□□ 2.39
CHPT1-202ENST00000546490 ESF1Q9H501 851 aaKnown RBP30■■■□□ 2.39
CHPT1-202ENST00000546490 A2MP01023 1474 aa29.95■■■□□ 2.39
CHPT1-202ENST00000546490 NCOA2Q15596 1464 aa29.93■■■□□ 2.38
CHPT1-202ENST00000546490 CLTCQ00610 1675 aaKnown RBP29.92■■■□□ 2.38
CHPT1-202ENST00000546490 VPS8Q8N3P4 1428 aa29.92■■■□□ 2.38
CHPT1-202ENST00000546490 STRCQ7RTU9 1775 aa29.92■■■□□ 2.38
CHPT1-202ENST00000546490 FBXO41Q8TF61 875 aa29.91■■■□□ 2.38
CHPT1-202ENST00000546490 MBD5Q9P267 1494 aa29.9■■■□□ 2.38
CHPT1-202ENST00000546490 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
CHPT1-202ENST00000546490 ZNF644Q9H582 1327 aaPredicted RBP29.87■■■□□ 2.37
CHPT1-202ENST00000546490 CCDC141Q6ZP82 1450 aa29.85■■■□□ 2.37
CHPT1-202ENST00000546490 RTEL1-TNFRSF6BF6WH68 1400 aa29.84■■■□□ 2.37
CHPT1-202ENST00000546490 NPATQ14207 1427 aa29.83■■■□□ 2.37
CHPT1-202ENST00000546490 LRRC9Q6ZRR7 1453 aa29.81■■■□□ 2.36
CHPT1-202ENST00000546490 ARHGEF5Q12774 1597 aa29.79■■■□□ 2.36
CHPT1-202ENST00000546490 LOC105371045A0A1W2PR82 267 aa29.79■■■□□ 2.36
CHPT1-202ENST00000546490 ZNF142P52746 1687 aaPredicted RBP29.79■■■□□ 2.36
CHPT1-202ENST00000546490 MYO3AQ8NEV4 1616 aa29.78■■■□□ 2.36
CHPT1-202ENST00000546490 MAP3K1Q13233 1512 aa29.78■■■□□ 2.36
CHPT1-202ENST00000546490 ZMYM3Q14202 1370 aa29.77■■■□□ 2.36
CHPT1-202ENST00000546490 DMRT2Q9Y5R5 561 aa29.75■■■□□ 2.35
CHPT1-202ENST00000546490 GGT6Q6P531 493 aa29.72■■■□□ 2.35
CHPT1-202ENST00000546490 DHX29Q7Z478 1369 aaKnown RBP29.71■■■□□ 2.35
CHPT1-202ENST00000546490 FAM135AQ9P2D6 1515 aa29.71■■■□□ 2.35
CHPT1-202ENST00000546490 RSPH4AQ5TD94 716 aa29.7■■■□□ 2.35
CHPT1-202ENST00000546490 PPP6R1Q9UPN7 881 aa29.69■■■□□ 2.34
CHPT1-202ENST00000546490 CAMSAP1Q5T5Y3 1602 aa29.69■■■□□ 2.34
CHPT1-202ENST00000546490 NCOA1Q15788 1441 aa29.69■■■□□ 2.34
CHPT1-202ENST00000546490 PTPRTO14522 1441 aa29.68■■■□□ 2.34
CHPT1-202ENST00000546490 CEP170BQ9Y4F5 1589 aaPredicted RBP29.68■■■□□ 2.34
CHPT1-202ENST00000546490 CERKQ8TCT0 537 aa29.67■■■□□ 2.34
CHPT1-202ENST00000546490 PTPRKQ15262 1439 aa29.67■■■□□ 2.34
CHPT1-202ENST00000546490 MAST1Q9Y2H9 1570 aa29.66■■■□□ 2.34
CHPT1-202ENST00000546490 KDM5DQ9BY66 1539 aa29.66■■■□□ 2.34
CHPT1-202ENST00000546490 MYOM3Q5VTT5 1437 aa29.62■■■□□ 2.33
CHPT1-202ENST00000546490 MIA2Q96PC5 1412 aa29.6■■■□□ 2.33
CHPT1-202ENST00000546490 TSPY4P0CV99 314 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms