RNA–Protein interactions for RNA: ENST00000546471.5

RRN3P1-202, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best)

Gene RRN3P1, Length 2,608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-202ENST00000546471 ADAMTS12P58397 1594 aa12.97□□□□□ -0.33
RRN3P1-202ENST00000546471 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
RRN3P1-202ENST00000546471 DAPK1P53355 1430 aa12.96□□□□□ -0.33
RRN3P1-202ENST00000546471 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.34
RRN3P1-202ENST00000546471 PPP4R2Q9NY27 417 aa12.95□□□□□ -0.34
RRN3P1-202ENST00000546471 FOXD1Q16676 465 aa12.95□□□□□ -0.34
RRN3P1-202ENST00000546471 MRS2Q9HD23 443 aa12.94□□□□□ -0.34
RRN3P1-202ENST00000546471 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
RRN3P1-202ENST00000546471 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
RRN3P1-202ENST00000546471 DNMT1P26358 1616 aaKnown RBP12.94□□□□□ -0.34
RRN3P1-202ENST00000546471 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
RRN3P1-202ENST00000546471 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
RRN3P1-202ENST00000546471 FAM9BQ8IZU0 186 aa12.93□□□□□ -0.34
RRN3P1-202ENST00000546471 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
RRN3P1-202ENST00000546471 POLR1AO95602 1720 aaPredicted RBP12.92□□□□□ -0.34
RRN3P1-202ENST00000546471 ABCC5O15440 1437 aa12.92□□□□□ -0.34
RRN3P1-202ENST00000546471 MSH5O43196 834 aa12.91□□□□□ -0.34
RRN3P1-202ENST00000546471 NBPF8Q3BBV2 869 aa12.91□□□□□ -0.34
RRN3P1-202ENST00000546471 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
RRN3P1-202ENST00000546471 KIF7Q2M1P5 1343 aa12.9□□□□□ -0.34
RRN3P1-202ENST00000546471 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
RRN3P1-202ENST00000546471 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.35
RRN3P1-202ENST00000546471 KIAA0556O60303 1618 aa12.87□□□□□ -0.35
RRN3P1-202ENST00000546471 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
RRN3P1-202ENST00000546471 ZNF644Q9H582 1327 aaPredicted RBP12.86□□□□□ -0.35
RRN3P1-202ENST00000546471 RAPGEF6Q8TEU7 1601 aa12.85□□□□□ -0.35
RRN3P1-202ENST00000546471 KIAA0586Q9BVV6 1533 aa12.85□□□□□ -0.35
RRN3P1-202ENST00000546471 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
RRN3P1-202ENST00000546471 BCL11AQ9H165 835 aa12.85□□□□□ -0.35
RRN3P1-202ENST00000546471 DISP1Q96F81 1524 aa12.84□□□□□ -0.35
RRN3P1-202ENST00000546471 PZPP20742 1482 aa12.84□□□□□ -0.35
RRN3P1-202ENST00000546471 B4GALNT3Q6L9W6 998 aa12.83□□□□□ -0.36
RRN3P1-202ENST00000546471 MBD5Q9P267 1494 aa12.83□□□□□ -0.36
RRN3P1-202ENST00000546471 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.36
RRN3P1-202ENST00000546471 CAMSAP2Q08AD1 1489 aa12.83□□□□□ -0.36
RRN3P1-202ENST00000546471 ITSN2Q9NZM3 1697 aa12.82□□□□□ -0.36
RRN3P1-202ENST00000546471 SMG6Q86US8 1419 aaKnown RBP12.82□□□□□ -0.36
RRN3P1-202ENST00000546471 KIAA1107Q9UPP5 1409 aa12.82□□□□□ -0.36
RRN3P1-202ENST00000546471 USP47Q96K76 1375 aa12.81□□□□□ -0.36
RRN3P1-202ENST00000546471 TROQ12816 1431 aaPredicted RBP12.81□□□□□ -0.36
RRN3P1-202ENST00000546471 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
RRN3P1-202ENST00000546471 KIF14Q15058 1648 aa12.81□□□□□ -0.36
RRN3P1-202ENST00000546471 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
RRN3P1-202ENST00000546471 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
RRN3P1-202ENST00000546471 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
RRN3P1-202ENST00000546471 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
RRN3P1-202ENST00000546471 ADGRL2O95490 1459 aa12.8□□□□□ -0.36
RRN3P1-202ENST00000546471 PRG4Q92954 1404 aaPredicted RBP12.78□□□□□ -0.36
RRN3P1-202ENST00000546471 NUDCQ9Y266 331 aa12.78□□□□□ -0.36
RRN3P1-202ENST00000546471 CROCC2H7BZ55 1655 aa12.78□□□□□ -0.36
RRN3P1-202ENST00000546471 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
RRN3P1-202ENST00000546471 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.36
RRN3P1-202ENST00000546471 GRIN2AQ12879 1464 aa12.77□□□□□ -0.36
RRN3P1-202ENST00000546471 KDM5CP41229 1560 aa12.77□□□□□ -0.37
RRN3P1-202ENST00000546471 BCORL1Q5H9F3 1711 aa12.77□□□□□ -0.37
RRN3P1-202ENST00000546471 ZNF326Q5BKZ1 582 aaKnown RBP12.77□□□□□ -0.37
RRN3P1-202ENST00000546471 POLR3GLQ9BT43 218 aa12.77□□□□□ -0.37
RRN3P1-202ENST00000546471 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
RRN3P1-202ENST00000546471 ROCK2O75116 1388 aaKnown RBP12.77□□□□□ -0.37
RRN3P1-202ENST00000546471 GPATCH8Q9UKJ3 1502 aaKnown RBP12.77□□□□□ -0.37
RRN3P1-202ENST00000546471 PKD2Q13563 968 aa12.76□□□□□ -0.37
RRN3P1-202ENST00000546471 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
RRN3P1-202ENST00000546471 ZNF777Q9ULD5 760 aaPredicted RBP12.75□□□□□ -0.37
RRN3P1-202ENST00000546471 RALGAPBQ86X10 1494 aa12.74□□□□□ -0.37
RRN3P1-202ENST00000546471 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
RRN3P1-202ENST00000546471 RNF123Q5XPI4 1314 aa12.74□□□□□ -0.37
RRN3P1-202ENST00000546471 ANKRD50Q9ULJ7 1429 aa12.74□□□□□ -0.37
RRN3P1-202ENST00000546471 CNGB1Q14028 1251 aaPredicted RBP12.74□□□□□ -0.37
RRN3P1-202ENST00000546471 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
RRN3P1-202ENST00000546471 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
RRN3P1-202ENST00000546471 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
RRN3P1-202ENST00000546471 PLB1Q6P1J6 1458 aa12.72□□□□□ -0.37
RRN3P1-202ENST00000546471 EIF4G3O43432 1585 aaKnown RBP12.71□□□□□ -0.37
RRN3P1-202ENST00000546471 KIF15Q9NS87 1388 aa12.71□□□□□ -0.37
RRN3P1-202ENST00000546471 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.38
RRN3P1-202ENST00000546471 CARD11Q9BXL7 1154 aa12.71□□□□□ -0.38
RRN3P1-202ENST00000546471 SHANK2Q9UPX8 1470 aa12.7□□□□□ -0.38
RRN3P1-202ENST00000546471 NOP58Q9Y2X3 529 aaKnown RBP12.7□□□□□ -0.38
RRN3P1-202ENST00000546471 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
RRN3P1-202ENST00000546471 NUP155O75694 1391 aa12.69□□□□□ -0.38
RRN3P1-202ENST00000546471 CARMIL2Q6F5E8 1435 aa12.69□□□□□ -0.38
RRN3P1-202ENST00000546471 C9orf84Q5VXU9 1444 aa12.68□□□□□ -0.38
RRN3P1-202ENST00000546471 MAGI1Q96QZ7 1491 aaPredicted RBP12.68□□□□□ -0.38
RRN3P1-202ENST00000546471 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
RRN3P1-202ENST00000546471 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
RRN3P1-202ENST00000546471 CEP170Q5SW79 1584 aa12.67□□□□□ -0.38
RRN3P1-202ENST00000546471 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
RRN3P1-202ENST00000546471 RALBP1Q15311 655 aa12.66□□□□□ -0.38
RRN3P1-202ENST00000546471 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
RRN3P1-202ENST00000546471 LRPPRCP42704 1394 aaKnown RBP12.66□□□□□ -0.38
RRN3P1-202ENST00000546471 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
RRN3P1-202ENST00000546471 ANP32AP39687 249 aaKnown RBP12.66□□□□□ -0.38
RRN3P1-202ENST00000546471 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
RRN3P1-202ENST00000546471 PLEKHD1A6NEE1 506 aa12.65□□□□□ -0.38
RRN3P1-202ENST00000546471 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
RRN3P1-202ENST00000546471 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
RRN3P1-202ENST00000546471 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
RRN3P1-202ENST00000546471 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
RRN3P1-202ENST00000546471 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
RRN3P1-202ENST00000546471 E9PCH4 1651 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms