RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 PPRC1Q5VV67 1664 aaKnown RBP12.55□□□□□ -0.4
CCDC60-205ENST00000546345 PYGBP11216 843 aa12.54□□□□□ -0.4
CCDC60-205ENST00000546345 RUSC2Q8N2Y8 1516 aa12.53□□□□□ -0.4
CCDC60-205ENST00000546345 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
CCDC60-205ENST00000546345 EVX2Q03828 476 aa12.51□□□□□ -0.41
CCDC60-205ENST00000546345 ZNF579Q8NAF0 562 aaKnown RBP12.49□□□□□ -0.41
CCDC60-205ENST00000546345 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
CCDC60-205ENST00000546345 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
CCDC60-205ENST00000546345 KIF12Q96FN5 646 aa12.46□□□□□ -0.41
CCDC60-205ENST00000546345 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.41
CCDC60-205ENST00000546345 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
CCDC60-205ENST00000546345 RGL2O15211 777 aa12.44□□□□□ -0.42
CCDC60-205ENST00000546345 MAP3K13O43283 966 aa12.43□□□□□ -0.42
CCDC60-205ENST00000546345 FHAD1B1AJZ9 1412 aa12.43□□□□□ -0.42
CCDC60-205ENST00000546345 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
CCDC60-205ENST00000546345 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
CCDC60-205ENST00000546345 SGIP1Q9BQI5 828 aa12.42□□□□□ -0.42
CCDC60-205ENST00000546345 PCDHB13Q9Y5F0 798 aa12.41□□□□□ -0.42
CCDC60-205ENST00000546345 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
CCDC60-205ENST00000546345 CLCN6P51797 869 aa12.39□□□□□ -0.43
CCDC60-205ENST00000546345 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
CCDC60-205ENST00000546345 TOP2BQ02880 1626 aa12.38□□□□□ -0.43
CCDC60-205ENST00000546345 RNF25Q96BH1 459 aaPredicted RBP12.38□□□□□ -0.43
CCDC60-205ENST00000546345 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
CCDC60-205ENST00000546345 CUL7Q14999 1698 aa12.36□□□□□ -0.43
CCDC60-205ENST00000546345 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
CCDC60-205ENST00000546345 GLI2P10070 1586 aa12.35□□□□□ -0.43
CCDC60-205ENST00000546345 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
CCDC60-205ENST00000546345 MAP3K4Q9Y6R4 1608 aa12.35□□□□□ -0.43
CCDC60-205ENST00000546345 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
CCDC60-205ENST00000546345 COL17A1Q9UMD9 1497 aaPredicted RBP12.33□□□□□ -0.44
CCDC60-205ENST00000546345 WRNQ14191 1432 aaPredicted RBP eCLIP12.32□□□□□ -0.44
CCDC60-205ENST00000546345 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
CCDC60-205ENST00000546345 GABBR2O75899 941 aa12.29□□□□□ -0.44
CCDC60-205ENST00000546345 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
CCDC60-205ENST00000546345 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
CCDC60-205ENST00000546345 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-205ENST00000546345 PDAP1Q13442 181 aaKnown RBP12.28□□□□□ -0.44
CCDC60-205ENST00000546345 JPH4Q96JJ6 628 aa12.28□□□□□ -0.44
CCDC60-205ENST00000546345 KIF21BO75037 1637 aa12.26□□□□□ -0.45
CCDC60-205ENST00000546345 PSEN1P49768 467 aa12.25□□□□□ -0.45
CCDC60-205ENST00000546345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.24□□□□□ -0.45
CCDC60-205ENST00000546345 ZFP91Q96JP5 570 aaPredicted RBP12.24□□□□□ -0.45
CCDC60-205ENST00000546345 ASXL2Q76L83 1435 aa12.23□□□□□ -0.45
CCDC60-205ENST00000546345 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
CCDC60-205ENST00000546345 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
CCDC60-205ENST00000546345 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
CCDC60-205ENST00000546345 ZCCHC11Q5TAX3 1644 aaKnown RBP12.22□□□□□ -0.45
CCDC60-205ENST00000546345 STK25O00506 426 aa12.21□□□□□ -0.45
CCDC60-205ENST00000546345 KIAA0586Q9BVV6 1533 aa12.21□□□□□ -0.46
CCDC60-205ENST00000546345 PLB1Q6P1J6 1458 aa12.2□□□□□ -0.46
CCDC60-205ENST00000546345 TIE1P35590 1138 aa12.19□□□□□ -0.46
CCDC60-205ENST00000546345 EPRSP07814 1512 aaKnown RBP12.19□□□□□ -0.46
CCDC60-205ENST00000546345 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
CCDC60-205ENST00000546345 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
CCDC60-205ENST00000546345 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
CCDC60-205ENST00000546345 STK24Q9Y6E0 443 aa12.17□□□□□ -0.46
CCDC60-205ENST00000546345 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
CCDC60-205ENST00000546345 UHRF1BP1LA0JNW5 1464 aa12.16□□□□□ -0.46
CCDC60-205ENST00000546345 TEX14Q8IWB6 1497 aa12.15□□□□□ -0.46
CCDC60-205ENST00000546345 CFAP43Q8NDM7 1665 aa12.14□□□□□ -0.47
CCDC60-205ENST00000546345 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
CCDC60-205ENST00000546345 BMP2KQ9NSY1 1161 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-205ENST00000546345 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
CCDC60-205ENST00000546345 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
CCDC60-205ENST00000546345 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
CCDC60-205ENST00000546345 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
CCDC60-205ENST00000546345 PTPRGP23470 1445 aa12.11□□□□□ -0.47
CCDC60-205ENST00000546345 PCF11O94913 1555 aaKnown RBP12.1□□□□□ -0.47
CCDC60-205ENST00000546345 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
CCDC60-205ENST00000546345 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-205ENST00000546345 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
CCDC60-205ENST00000546345 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
CCDC60-205ENST00000546345 DISP1Q96F81 1524 aa12.09□□□□□ -0.47
CCDC60-205ENST00000546345 ASTLQ6HA08 431 aaPredicted RBP12.08□□□□□ -0.48
CCDC60-205ENST00000546345 BCORL1Q5H9F3 1711 aa12.08□□□□□ -0.48
CCDC60-205ENST00000546345 MADDQ8WXG6 1647 aa12.08□□□□□ -0.48
CCDC60-205ENST00000546345 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
CCDC60-205ENST00000546345 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
CCDC60-205ENST00000546345 UACAQ9BZF9 1416 aa12.06□□□□□ -0.48
CCDC60-205ENST00000546345 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
CCDC60-205ENST00000546345 KIAA0556O60303 1618 aa12.06□□□□□ -0.48
CCDC60-205ENST00000546345 PTPRMP28827 1452 aa12.06□□□□□ -0.48
CCDC60-205ENST00000546345 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
CCDC60-205ENST00000546345 WDR7Q9Y4E6 1490 aa12.05□□□□□ -0.48
CCDC60-205ENST00000546345 MAGI3Q5TCQ9 1506 aa12.05□□□□□ -0.48
CCDC60-205ENST00000546345 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
CCDC60-205ENST00000546345 MKRN3Q13064 507 aaKnown RBP12.03□□□□□ -0.48
CCDC60-205ENST00000546345 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
CCDC60-205ENST00000546345 FRMPD1Q5SYB0 1578 aa12.02□□□□□ -0.49
CCDC60-205ENST00000546345 IGF1RP08069 1367 aa12.02□□□□□ -0.49
CCDC60-205ENST00000546345 CARMIL2Q6F5E8 1435 aa12.02□□□□□ -0.49
CCDC60-205ENST00000546345 ILDR2Q71H61 639 aa12.01□□□□□ -0.49
CCDC60-205ENST00000546345 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
CCDC60-205ENST00000546345 SOX12O15370 315 aa12□□□□□ -0.49
CCDC60-205ENST00000546345 POTEIP0CG38 1075 aa12□□□□□ -0.49
CCDC60-205ENST00000546345 UGGT2Q9NYU1 1516 aa12□□□□□ -0.49
CCDC60-205ENST00000546345 SIGLEC1Q9BZZ2 1709 aa12□□□□□ -0.49
CCDC60-205ENST00000546345 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
CCDC60-205ENST00000546345 TTBK1Q5TCY1 1321 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms