RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
COPS7A-221ENST00000546229 KDM5CP41229 1560 aa20.98■□□□□ 0.95
COPS7A-221ENST00000546229 SCAPERQ9BY12 1400 aa20.97■□□□□ 0.95
COPS7A-221ENST00000546229 TROQ12816 1431 aaPredicted RBP20.96■□□□□ 0.95
COPS7A-221ENST00000546229 FER1L4A9Z1Z3 1794 aa20.95■□□□□ 0.94
COPS7A-221ENST00000546229 ARHGEF12Q9NZN5 1544 aa20.95■□□□□ 0.94
COPS7A-221ENST00000546229 CDC42BPBQ9Y5S2 1711 aa20.93■□□□□ 0.94
COPS7A-221ENST00000546229 ARID4BQ4LE39 1312 aaPredicted RBP20.91■□□□□ 0.94
COPS7A-221ENST00000546229 PREX2Q70Z35 1606 aa20.91■□□□□ 0.94
COPS7A-221ENST00000546229 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
COPS7A-221ENST00000546229 DIP2CQ9Y2E4 1556 aa20.89■□□□□ 0.94
COPS7A-221ENST00000546229 ATP10AO60312 1499 aa20.89■□□□□ 0.94
COPS7A-221ENST00000546229 ZNF518AQ6AHZ1 1483 aa20.89■□□□□ 0.94
COPS7A-221ENST00000546229 C9orf84Q5VXU9 1444 aa20.89■□□□□ 0.94
COPS7A-221ENST00000546229 REREQ9P2R6 1566 aa20.89■□□□□ 0.93
COPS7A-221ENST00000546229 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
COPS7A-221ENST00000546229 CASKIN1Q8WXD9 1431 aa20.87■□□□□ 0.93
COPS7A-221ENST00000546229 ABCA6Q8N139 1617 aa20.87■□□□□ 0.93
COPS7A-221ENST00000546229 ABCC1P33527 1531 aa20.87■□□□□ 0.93
COPS7A-221ENST00000546229 ARHGAP5Q13017 1502 aa20.87■□□□□ 0.93
COPS7A-221ENST00000546229 CCDC18Q5T9S5 1454 aa20.85■□□□□ 0.93
COPS7A-221ENST00000546229 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
COPS7A-221ENST00000546229 CLIP1P30622 1438 aa20.84■□□□□ 0.93
COPS7A-221ENST00000546229 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
COPS7A-221ENST00000546229 EFCAB2Q5VUJ9 269 aa20.83■□□□□ 0.93
COPS7A-221ENST00000546229 FYCO1Q9BQS8 1478 aa20.81■□□□□ 0.92
COPS7A-221ENST00000546229 MLH3Q9UHC1 1453 aa20.81■□□□□ 0.92
COPS7A-221ENST00000546229 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
COPS7A-221ENST00000546229 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
COPS7A-221ENST00000546229 KIDINS220Q9ULH0 1771 aa20.78■□□□□ 0.92
COPS7A-221ENST00000546229 TRAPPC8Q9Y2L5 1435 aa20.78■□□□□ 0.92
COPS7A-221ENST00000546229 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
COPS7A-221ENST00000546229 AGLP35573 1532 aa20.77■□□□□ 0.92
COPS7A-221ENST00000546229 AFAP1Q8N556 730 aa20.76■□□□□ 0.91
COPS7A-221ENST00000546229 FBXO41Q8TF61 875 aa20.76■□□□□ 0.91
COPS7A-221ENST00000546229 HSPA2P54652 639 aa20.75■□□□□ 0.91
COPS7A-221ENST00000546229 SAMD9LQ8IVG5 1584 aa20.75■□□□□ 0.91
COPS7A-221ENST00000546229 MLECQ14165 292 aa20.73■□□□□ 0.91
COPS7A-221ENST00000546229 C3P01024 1663 aa20.72■□□□□ 0.91
COPS7A-221ENST00000546229 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
COPS7A-221ENST00000546229 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
COPS7A-221ENST00000546229 SYCP2Q9BX26 1530 aa20.68■□□□□ 0.9
COPS7A-221ENST00000546229 INO80Q9ULG1 1556 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-221ENST00000546229 PLXNC1O60486 1568 aa20.66■□□□□ 0.9
COPS7A-221ENST00000546229 CEBPAP49715 358 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-221ENST00000546229 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
COPS7A-221ENST00000546229 MROH2AA6NES4 1674 aa20.62■□□□□ 0.89
COPS7A-221ENST00000546229 SETD1BQ9UPS6 1966 aaKnown RBP20.61■□□□□ 0.89
COPS7A-221ENST00000546229 UHRF1BP1Q6BDS2 1440 aa20.6■□□□□ 0.89
COPS7A-221ENST00000546229 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
COPS7A-221ENST00000546229 ATP7AQ04656 1500 aa20.59■□□□□ 0.89
COPS7A-221ENST00000546229 KIAA1107Q9UPP5 1409 aa20.59■□□□□ 0.89
COPS7A-221ENST00000546229 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
COPS7A-221ENST00000546229 EHBP1L1Q8N3D4 1523 aa20.54■□□□□ 0.88
COPS7A-221ENST00000546229 SUPT6HQ7KZ85 1726 aaKnown RBP20.54■□□□□ 0.88
COPS7A-221ENST00000546229 PLEKHH2Q8IVE3 1493 aa20.54■□□□□ 0.88
COPS7A-221ENST00000546229 MBD5Q9P267 1494 aa20.52■□□□□ 0.88
COPS7A-221ENST00000546229 CERKQ8TCT0 537 aa20.52■□□□□ 0.88
COPS7A-221ENST00000546229 NPATQ14207 1427 aa20.51■□□□□ 0.87
COPS7A-221ENST00000546229 ZNF142P52746 1687 aaPredicted RBP20.51■□□□□ 0.87
COPS7A-221ENST00000546229 CLTCQ00610 1675 aaKnown RBP20.5■□□□□ 0.87
COPS7A-221ENST00000546229 PTPRTO14522 1441 aa20.5■□□□□ 0.87
COPS7A-221ENST00000546229 NCOA1Q15788 1441 aa20.5■□□□□ 0.87
COPS7A-221ENST00000546229 ADGBQ8N7X0 1667 aa20.49■□□□□ 0.87
COPS7A-221ENST00000546229 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
COPS7A-221ENST00000546229 A2MP01023 1474 aa20.49■□□□□ 0.87
COPS7A-221ENST00000546229 LTBP4Q8N2S1 1624 aa20.49■□□□□ 0.87
COPS7A-221ENST00000546229 HNRNPMP52272 730 aaKnown RBP eCLIP20.48■□□□□ 0.87
COPS7A-221ENST00000546229 MYO3AQ8NEV4 1616 aa20.48■□□□□ 0.87
COPS7A-221ENST00000546229 SPAG9O60271 1321 aaKnown RBP20.48■□□□□ 0.87
COPS7A-221ENST00000546229 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
COPS7A-221ENST00000546229 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
COPS7A-221ENST00000546229 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
COPS7A-221ENST00000546229 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
COPS7A-221ENST00000546229 CAMSAP1Q5T5Y3 1602 aa20.43■□□□□ 0.86
COPS7A-221ENST00000546229 CFDP1Q9UEE9 299 aaPredicted RBP20.43■□□□□ 0.86
COPS7A-221ENST00000546229 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
COPS7A-221ENST00000546229 ZNF644Q9H582 1327 aaPredicted RBP20.42■□□□□ 0.86
COPS7A-221ENST00000546229 ZMYM3Q14202 1370 aa20.42■□□□□ 0.86
COPS7A-221ENST00000546229 CEP170BQ9Y4F5 1589 aaPredicted RBP20.41■□□□□ 0.86
COPS7A-221ENST00000546229 RTEL1-TNFRSF6BF6WH68 1400 aa20.4■□□□□ 0.86
COPS7A-221ENST00000546229 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
COPS7A-221ENST00000546229 NCOA2Q15596 1464 aa20.38■□□□□ 0.85
COPS7A-221ENST00000546229 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
COPS7A-221ENST00000546229 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
COPS7A-221ENST00000546229 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
COPS7A-221ENST00000546229 IQSEC2Q5JU85 1478 aa20.36■□□□□ 0.85
COPS7A-221ENST00000546229 CCDC141Q6ZP82 1450 aa20.36■□□□□ 0.85
COPS7A-221ENST00000546229 ARHGEF5Q12774 1597 aa20.34■□□□□ 0.85
COPS7A-221ENST00000546229 FAM135AQ9P2D6 1515 aa20.34■□□□□ 0.85
COPS7A-221ENST00000546229 ESF1Q9H501 851 aaKnown RBP20.34■□□□□ 0.85
COPS7A-221ENST00000546229 DHX29Q7Z478 1369 aaKnown RBP20.32■□□□□ 0.84
COPS7A-221ENST00000546229 DNMT1P26358 1616 aaKnown RBP20.31■□□□□ 0.84
COPS7A-221ENST00000546229 KDM5DQ9BY66 1539 aa20.3■□□□□ 0.84
COPS7A-221ENST00000546229 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
COPS7A-221ENST00000546229 A2ML1A8K2U0 1454 aa20.28■□□□□ 0.84
COPS7A-221ENST00000546229 NEURL4Q96JN8 1562 aa20.28■□□□□ 0.84
COPS7A-221ENST00000546229 VPS8Q8N3P4 1428 aa20.27■□□□□ 0.84
COPS7A-221ENST00000546229 RNF17Q9BXT8 1623 aaKnown RBP20.27■□□□□ 0.84
COPS7A-221ENST00000546229 MAST1Q9Y2H9 1570 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms