RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, human

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-215	ENST00000546191	FAM50A	Q14320	339 aa	Known RBP	13.68	□□□□□ -0.22
NEK6-215	ENST00000546191	EHBP1L1	Q8N3D4	1523 aa		13.68	□□□□□ -0.22
NEK6-215	ENST00000546191	MTUS2	Q5JR59	1369 aa		13.68	□□□□□ -0.22
NEK6-215	ENST00000546191	CCDC18	Q5T9S5	1454 aa		13.67	□□□□□ -0.22
NEK6-215	ENST00000546191	NEFL	P07196	543 aa		13.66	□□□□□ -0.22
NEK6-215	ENST00000546191	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.65	□□□□□ -0.22
NEK6-215	ENST00000546191	CARMIL2	Q6F5E8	1435 aa		13.65	□□□□□ -0.22
NEK6-215	ENST00000546191	MYOM3	Q5VTT5	1437 aa		13.65	□□□□□ -0.23
NEK6-215	ENST00000546191	NCOA2	Q15596	1464 aa		13.64	□□□□□ -0.23
NEK6-215	ENST00000546191	HECW1	Q76N89	1606 aa		13.64	□□□□□ -0.23
NEK6-215	ENST00000546191	ARID3C	A6NKF2	412 aa		13.64	□□□□□ -0.23
NEK6-215	ENST00000546191	PLB1	Q6P1J6	1458 aa		13.64	□□□□□ -0.23
NEK6-215	ENST00000546191	TIMELESS	Q9UNS1	1208 aa		13.63	□□□□□ -0.23
NEK6-215	ENST00000546191	PTPRG	P23470	1445 aa		13.62	□□□□□ -0.23
NEK6-215	ENST00000546191	CYB5RL	Q6IPT4	315 aa		13.62	□□□□□ -0.23
NEK6-215	ENST00000546191	HFM1	A2PYH4	1435 aa		13.61	□□□□□ -0.23
NEK6-215	ENST00000546191	VSIG10	Q8N0Z9	540 aa		13.61	□□□□□ -0.23
NEK6-215	ENST00000546191	GLIPR1L2	Q4G1C9	344 aa		13.59	□□□□□ -0.23
NEK6-215	ENST00000546191	MAGI3	Q5TCQ9	1506 aa		13.59	□□□□□ -0.23
NEK6-215	ENST00000546191	TCOF1	Q13428	1488 aa	Known RBP	13.58	□□□□□ -0.23
NEK6-215	ENST00000546191	EPRS	P07814	1512 aa	Known RBP	13.58	□□□□□ -0.24
NEK6-215	ENST00000546191		A0A0U1RQG5	324 aa	Predicted RBP	13.57	□□□□□ -0.24
NEK6-215	ENST00000546191	ADCY10	Q96PN6	1610 aa		13.57	□□□□□ -0.24
NEK6-215	ENST00000546191	PTPN23	Q9H3S7	1636 aa		13.57	□□□□□ -0.24
NEK6-215	ENST00000546191	PTPRK	Q15262	1439 aa		13.57	□□□□□ -0.24
NEK6-215	ENST00000546191	ABCA8	O94911	1581 aa		13.56	□□□□□ -0.24
NEK6-215	ENST00000546191	NOP58	Q9Y2X3	529 aa	Known RBP	13.56	□□□□□ -0.24
NEK6-215	ENST00000546191	PDE4C	Q08493	712 aa		13.56	□□□□□ -0.24
NEK6-215	ENST00000546191	RAPGEF6	Q8TEU7	1601 aa		13.55	□□□□□ -0.24
NEK6-215	ENST00000546191	UACA	Q9BZF9	1416 aa		13.55	□□□□□ -0.24
NEK6-215	ENST00000546191	MIA2	Q96PC5	1412 aa		13.54	□□□□□ -0.24
NEK6-215	ENST00000546191	PAK3	O75914	559 aa	Predicted RBP	13.54	□□□□□ -0.24
NEK6-215	ENST00000546191	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.54	□□□□□ -0.24
NEK6-215	ENST00000546191	NAIP	Q13075	1403 aa		13.54	□□□□□ -0.24
NEK6-215	ENST00000546191	NUP153	P49790	1475 aa	Known RBP	13.54	□□□□□ -0.24
NEK6-215	ENST00000546191	RTL5	Q5HYW3	569 aa	Predicted RBP	13.54	□□□□□ -0.24
NEK6-215	ENST00000546191	AKNA	Q7Z591	1439 aa		13.53	□□□□□ -0.24
NEK6-215	ENST00000546191	CDK13	Q14004	1512 aa	Known RBP	13.53	□□□□□ -0.24
NEK6-215	ENST00000546191	FGD1	P98174	961 aa		13.53	□□□□□ -0.24
NEK6-215	ENST00000546191	ABCC2	Q92887	1545 aa		13.51	□□□□□ -0.25
NEK6-215	ENST00000546191	KCNH8	Q96L42	1107 aa		13.5	□□□□□ -0.25
NEK6-215	ENST00000546191	GCC2	Q8IWJ2	1684 aa		13.49	□□□□□ -0.25
NEK6-215	ENST00000546191	SIN3A	Q96ST3	1273 aa		13.49	□□□□□ -0.25
NEK6-215	ENST00000546191	C11orf95	C9JLR9	678 aa	Predicted RBP	13.48	□□□□□ -0.25
NEK6-215	ENST00000546191	PDIA4	P13667	645 aa	Known RBP	13.48	□□□□□ -0.25
NEK6-215	ENST00000546191	AAMP	Q13685	434 aa		13.48	□□□□□ -0.25
NEK6-215	ENST00000546191	RSPH6A	Q9H0K4	717 aa		13.48	□□□□□ -0.25
NEK6-215	ENST00000546191	ATP10B	O94823	1461 aa		13.47	□□□□□ -0.25
NEK6-215	ENST00000546191	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.47	□□□□□ -0.25
NEK6-215	ENST00000546191	RBM10	P98175	930 aa	Known RBP	13.47	□□□□□ -0.25
NEK6-215	ENST00000546191	PPP1R15A	O75807	674 aa	Predicted RBP	13.46	□□□□□ -0.25
NEK6-215	ENST00000546191	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.46	□□□□□ -0.25
NEK6-215	ENST00000546191	UHRF1BP1L	A0JNW5	1464 aa		13.46	□□□□□ -0.26
NEK6-215	ENST00000546191	KDM5B	Q9UGL1	1544 aa		13.44	□□□□□ -0.26
NEK6-215	ENST00000546191	BRPF3	Q9ULD4	1205 aa		13.43	□□□□□ -0.26
NEK6-215	ENST00000546191	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.42	□□□□□ -0.26
NEK6-215	ENST00000546191	ROCK1	Q13464	1354 aa		13.42	□□□□□ -0.26
NEK6-215	ENST00000546191	WASHC2A	Q641Q2	1341 aa		13.41	□□□□□ -0.26
NEK6-215	ENST00000546191	TONSL	Q96HA7	1378 aa		13.41	□□□□□ -0.26
NEK6-215	ENST00000546191	DNMT1	P26358	1616 aa	Known RBP	13.4	□□□□□ -0.27
NEK6-215	ENST00000546191	WASHC2C	Q9Y4E1	1318 aa		13.39	□□□□□ -0.27
NEK6-215	ENST00000546191	TRO	Q12816	1431 aa	Predicted RBP	13.38	□□□□□ -0.27
NEK6-215	ENST00000546191	DAPK1	P53355	1430 aa		13.38	□□□□□ -0.27
NEK6-215	ENST00000546191	ASXL2	Q76L83	1435 aa		13.37	□□□□□ -0.27
NEK6-215	ENST00000546191	KIF14	Q15058	1648 aa		13.37	□□□□□ -0.27
NEK6-215	ENST00000546191	DENND4B	O75064	1496 aa	Predicted RBP	13.37	□□□□□ -0.27
NEK6-215	ENST00000546191	RRP7BP	Q9NSQ0	103 aa		13.36	□□□□□ -0.27
NEK6-215	ENST00000546191	ABCC5	O15440	1437 aa		13.36	□□□□□ -0.27
NEK6-215	ENST00000546191	KDM6B	O15054	1643 aa		13.35	□□□□□ -0.27
NEK6-215	ENST00000546191	ITSN2	Q9NZM3	1697 aa		13.35	□□□□□ -0.27
NEK6-215	ENST00000546191	NPM1	P06748	294 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
NEK6-215	ENST00000546191	CHIC2	Q9UKJ5	165 aa		13.34	□□□□□ -0.27
NEK6-215	ENST00000546191	WDR7	Q9Y4E6	1490 aa		13.33	□□□□□ -0.28
NEK6-215	ENST00000546191	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.31	□□□□□ -0.28
NEK6-215	ENST00000546191	TTC37	Q6PGP7	1564 aa		13.31	□□□□□ -0.28
NEK6-215	ENST00000546191	PLEKHD1	A6NEE1	506 aa		13.3	□□□□□ -0.28
NEK6-215	ENST00000546191	MPHOSPH9	Q99550	1183 aa		13.3	□□□□□ -0.28
NEK6-215	ENST00000546191	CAMSAP2	Q08AD1	1489 aa		13.3	□□□□□ -0.28
NEK6-215	ENST00000546191	KLHL34	Q8N239	644 aa		13.29	□□□□□ -0.28
NEK6-215	ENST00000546191	ADGRL2	O95490	1459 aa		13.29	□□□□□ -0.28
NEK6-215	ENST00000546191	DDX10	Q13206	875 aa	Known RBP	13.28	□□□□□ -0.28
NEK6-215	ENST00000546191	TRIM52	Q96A61	297 aa		13.28	□□□□□ -0.28
NEK6-215	ENST00000546191	KIF13A	Q9H1H9	1805 aa		13.28	□□□□□ -0.28
NEK6-215	ENST00000546191	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
NEK6-215	ENST00000546191	DIP2B	Q9P265	1576 aa		13.28	□□□□□ -0.28
NEK6-215	ENST00000546191	ADGB	Q8N7X0	1667 aa		13.28	□□□□□ -0.28
NEK6-215	ENST00000546191	ZNF644	Q9H582	1327 aa	Predicted RBP	13.27	□□□□□ -0.28
NEK6-215	ENST00000546191	CROCC2	H7BZ55	1655 aa		13.27	□□□□□ -0.29
NEK6-215	ENST00000546191	IPO9	Q96P70	1041 aa	Known RBP	13.27	□□□□□ -0.29
NEK6-215	ENST00000546191	NEFM	P07197	916 aa		13.26	□□□□□ -0.29
NEK6-215	ENST00000546191	IRX6	P78412	446 aa	Predicted RBP	13.26	□□□□□ -0.29
NEK6-215	ENST00000546191	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.26	□□□□□ -0.29
NEK6-215	ENST00000546191	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.26	□□□□□ -0.29
NEK6-215	ENST00000546191	ANKRD30B	Q9BXX2	1392 aa		13.26	□□□□□ -0.29
NEK6-215	ENST00000546191	ABCC10	Q5T3U5	1492 aa		13.26	□□□□□ -0.29
NEK6-215	ENST00000546191	NCOA1	Q15788	1441 aa		13.26	□□□□□ -0.29
NEK6-215	ENST00000546191	CCER2	I3L3R5	266 aa		13.25	□□□□□ -0.29
NEK6-215	ENST00000546191	RPRD2	Q5VT52	1461 aa	Known RBP	13.25	□□□□□ -0.29
NEK6-215	ENST00000546191	FAM69C	Q0P6D2	419 aa		13.25	□□□□□ -0.29
NEK6-215	ENST00000546191	TSPOAP1	O95153	1857 aa		13.24	□□□□□ -0.29

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