RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 CFAP74Q9C0B2 1584 aa19.11■□□□□ 0.65
NECAP1-209ENST00000546181 ARID4BQ4LE39 1312 aaPredicted RBP19.11■□□□□ 0.65
NECAP1-209ENST00000546181 SIGLEC1Q9BZZ2 1709 aa19.11■□□□□ 0.65
NECAP1-209ENST00000546181 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
NECAP1-209ENST00000546181 LRRIQ1Q96JM4 1722 aa19.1■□□□□ 0.65
NECAP1-209ENST00000546181 KIF14Q15058 1648 aa19.08■□□□□ 0.65
NECAP1-209ENST00000546181 FMN1Q68DA7 1419 aa19.08■□□□□ 0.64
NECAP1-209ENST00000546181 RIMS1Q86UR5 1692 aaKnown RBP19.07■□□□□ 0.64
NECAP1-209ENST00000546181 YEATS2Q9ULM3 1422 aa19.07■□□□□ 0.64
NECAP1-209ENST00000546181 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
NECAP1-209ENST00000546181 MYO5CQ9NQX4 1742 aa19.05■□□□□ 0.64
NECAP1-209ENST00000546181 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
NECAP1-209ENST00000546181 PLCH2O75038 1416 aa19.04■□□□□ 0.64
NECAP1-209ENST00000546181 SCAPERQ9BY12 1400 aa19.02■□□□□ 0.64
NECAP1-209ENST00000546181 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
NECAP1-209ENST00000546181 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
NECAP1-209ENST00000546181 PCF11O94913 1555 aaKnown RBP18.99■□□□□ 0.63
NECAP1-209ENST00000546181 TROQ12816 1431 aaPredicted RBP18.98■□□□□ 0.63
NECAP1-209ENST00000546181 MLECQ14165 292 aa18.97■□□□□ 0.63
NECAP1-209ENST00000546181 LMTK3Q96Q04 1460 aa18.96■□□□□ 0.63
NECAP1-209ENST00000546181 ARHGAP5Q13017 1502 aa18.95■□□□□ 0.62
NECAP1-209ENST00000546181 MAGI2Q86UL8 1455 aa18.95■□□□□ 0.62
NECAP1-209ENST00000546181 FER1L4A9Z1Z3 1794 aa18.94■□□□□ 0.62
NECAP1-209ENST00000546181 EFCAB2Q5VUJ9 269 aa18.94■□□□□ 0.62
NECAP1-209ENST00000546181 CDK11AQ9UQ88 783 aaPredicted RBP18.94■□□□□ 0.62
NECAP1-209ENST00000546181 CDC42BPBQ9Y5S2 1711 aa18.93■□□□□ 0.62
NECAP1-209ENST00000546181 CLIP1P30622 1438 aa18.91■□□□□ 0.62
NECAP1-209ENST00000546181 CASKIN1Q8WXD9 1431 aa18.9■□□□□ 0.62
NECAP1-209ENST00000546181 ATP10AO60312 1499 aa18.9■□□□□ 0.62
NECAP1-209ENST00000546181 HSPA2P54652 639 aa18.89■□□□□ 0.61
NECAP1-209ENST00000546181 AFAP1Q8N556 730 aa18.89■□□□□ 0.61
NECAP1-209ENST00000546181 C9orf84Q5VXU9 1444 aa18.88■□□□□ 0.61
NECAP1-209ENST00000546181 KDM5CP41229 1560 aa18.88■□□□□ 0.61
NECAP1-209ENST00000546181 PREX2Q70Z35 1606 aa18.88■□□□□ 0.61
NECAP1-209ENST00000546181 ZNF518AQ6AHZ1 1483 aa18.87■□□□□ 0.61
NECAP1-209ENST00000546181 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
NECAP1-209ENST00000546181 DIP2CQ9Y2E4 1556 aa18.85■□□□□ 0.61
NECAP1-209ENST00000546181 ARHGEF12Q9NZN5 1544 aa18.85■□□□□ 0.61
NECAP1-209ENST00000546181 CDC42BPAQ5VT25 1732 aa18.85■□□□□ 0.61
NECAP1-209ENST00000546181 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
NECAP1-209ENST00000546181 ABCC1P33527 1531 aa18.84■□□□□ 0.61
NECAP1-209ENST00000546181 ITSN2Q9NZM3 1697 aa18.83■□□□□ 0.61
NECAP1-209ENST00000546181 MYT1LQ9UL68 1186 aa18.83■□□□□ 0.6
NECAP1-209ENST00000546181 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.6
NECAP1-209ENST00000546181 CEBPAP49715 358 aaPredicted RBP18.82■□□□□ 0.6
NECAP1-209ENST00000546181 FYCO1Q9BQS8 1478 aa18.82■□□□□ 0.6
NECAP1-209ENST00000546181 KIDINS220Q9ULH0 1771 aa18.77■□□□□ 0.6
NECAP1-209ENST00000546181 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.59
NECAP1-209ENST00000546181 SAMD9LQ8IVG5 1584 aa18.76■□□□□ 0.59
NECAP1-209ENST00000546181 PREX1Q8TCU6 1659 aa18.76■□□□□ 0.59
NECAP1-209ENST00000546181 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
NECAP1-209ENST00000546181 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
NECAP1-209ENST00000546181 REREQ9P2R6 1566 aa18.74■□□□□ 0.59
NECAP1-209ENST00000546181 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
NECAP1-209ENST00000546181 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
NECAP1-209ENST00000546181 C3P01024 1663 aa18.72■□□□□ 0.59
NECAP1-209ENST00000546181 HNRNPMP52272 730 aaKnown RBP eCLIP18.69■□□□□ 0.58
NECAP1-209ENST00000546181 AGLP35573 1532 aa18.69■□□□□ 0.58
NECAP1-209ENST00000546181 STRCQ7RTU9 1775 aa18.67■□□□□ 0.58
NECAP1-209ENST00000546181 SUPT6HQ7KZ85 1726 aaKnown RBP18.66■□□□□ 0.58
NECAP1-209ENST00000546181 MTUS2Q5JR59 1369 aa18.64■□□□□ 0.57
NECAP1-209ENST00000546181 CCNB3Q8WWL7 1395 aa18.64■□□□□ 0.57
NECAP1-209ENST00000546181 UHRF1BP1Q6BDS2 1440 aa18.64■□□□□ 0.57
NECAP1-209ENST00000546181 CFDP1Q9UEE9 299 aaPredicted RBP18.63■□□□□ 0.57
NECAP1-209ENST00000546181 SPAG9O60271 1321 aaKnown RBP18.63■□□□□ 0.57
NECAP1-209ENST00000546181 ATP7AQ04656 1500 aa18.63■□□□□ 0.57
NECAP1-209ENST00000546181 TIAM1Q13009 1591 aa18.63■□□□□ 0.57
NECAP1-209ENST00000546181 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
NECAP1-209ENST00000546181 SETD1BQ9UPS6 1966 aaKnown RBP18.62■□□□□ 0.57
NECAP1-209ENST00000546181 ZNF644Q9H582 1327 aaPredicted RBP18.62■□□□□ 0.57
NECAP1-209ENST00000546181 CEP162Q5TB80 1403 aa18.62■□□□□ 0.57
NECAP1-209ENST00000546181 ESF1Q9H501 851 aaKnown RBP18.6■□□□□ 0.57
NECAP1-209ENST00000546181 CERKQ8TCT0 537 aa18.59■□□□□ 0.57
NECAP1-209ENST00000546181 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
NECAP1-209ENST00000546181 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
NECAP1-209ENST00000546181 CLTCQ00610 1675 aaKnown RBP18.58■□□□□ 0.57
NECAP1-209ENST00000546181 PLXNC1O60486 1568 aa18.58■□□□□ 0.56
NECAP1-209ENST00000546181 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
NECAP1-209ENST00000546181 PLEKHH2Q8IVE3 1493 aa18.57■□□□□ 0.56
NECAP1-209ENST00000546181 A2MP01023 1474 aa18.56■□□□□ 0.56
NECAP1-209ENST00000546181 MROH2AA6NES4 1674 aa18.56■□□□□ 0.56
NECAP1-209ENST00000546181 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
NECAP1-209ENST00000546181 MBD5Q9P267 1494 aa18.53■□□□□ 0.56
NECAP1-209ENST00000546181 ADGBQ8N7X0 1667 aa18.52■□□□□ 0.56
NECAP1-209ENST00000546181 ZMYM3Q14202 1370 aa18.52■□□□□ 0.55
NECAP1-209ENST00000546181 HOXD11P31277 338 aaPredicted RBP18.51■□□□□ 0.55
NECAP1-209ENST00000546181 GGT6Q6P531 493 aa18.51■□□□□ 0.55
NECAP1-209ENST00000546181 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
NECAP1-209ENST00000546181 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
NECAP1-209ENST00000546181 CAMSAP1Q5T5Y3 1602 aa18.49■□□□□ 0.55
NECAP1-209ENST00000546181 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
NECAP1-209ENST00000546181 MYO3AQ8NEV4 1616 aa18.48■□□□□ 0.55
NECAP1-209ENST00000546181 NPATQ14207 1427 aa18.48■□□□□ 0.55
NECAP1-209ENST00000546181 CAMSAP2Q08AD1 1489 aa18.47■□□□□ 0.55
NECAP1-209ENST00000546181 PTPRTO14522 1441 aa18.46■□□□□ 0.55
NECAP1-209ENST00000546181 PTPRKQ15262 1439 aa18.45■□□□□ 0.54
NECAP1-209ENST00000546181 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
NECAP1-209ENST00000546181 LTBP4Q8N2S1 1624 aa18.43■□□□□ 0.54
NECAP1-209ENST00000546181 CCDC141Q6ZP82 1450 aa18.43■□□□□ 0.54
NECAP1-209ENST00000546181 NCKAP5LQ9HCH0 1330 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms