RNA–Protein interactions for RNA: ENST00000546157.1

LRTM2-211, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-211ENST00000546157 POGZQ7Z3K3 1410 aa34.92■■■■□ 3.18
LRTM2-211ENST00000546157 ZFYVE16Q7Z3T8 1539 aa34.91■■■■□ 3.18
LRTM2-211ENST00000546157 FYCO1Q9BQS8 1478 aa34.9■■■■□ 3.18
LRTM2-211ENST00000546157 YEATS2Q9ULM3 1422 aa34.9■■■■□ 3.18
LRTM2-211ENST00000546157 SIGLEC1Q9BZZ2 1709 aa34.9■■■■□ 3.18
LRTM2-211ENST00000546157 EFCAB2Q5VUJ9 269 aa34.88■■■■□ 3.17
LRTM2-211ENST00000546157 CDC42BPBQ9Y5S2 1711 aa34.88■■■■□ 3.17
LRTM2-211ENST00000546157 MADDQ8WXG6 1647 aa34.88■■■■□ 3.17
LRTM2-211ENST00000546157 ARID4BQ4LE39 1312 aaPredicted RBP34.87■■■■□ 3.17
LRTM2-211ENST00000546157 ARHGAP5Q13017 1502 aa34.86■■■■□ 3.17
LRTM2-211ENST00000546157 MAGI2Q86UL8 1455 aa34.86■■■■□ 3.17
LRTM2-211ENST00000546157 PTPRMP28827 1452 aa34.85■■■■□ 3.17
LRTM2-211ENST00000546157 PREX2Q70Z35 1606 aa34.81■■■■□ 3.16
LRTM2-211ENST00000546157 RIMS1Q86UR5 1692 aaKnown RBP34.76■■■■□ 3.16
LRTM2-211ENST00000546157 CDC42BPAQ5VT25 1732 aa34.76■■■■□ 3.16
LRTM2-211ENST00000546157 KDM5CP41229 1560 aa34.74■■■■□ 3.15
LRTM2-211ENST00000546157 ZNF518AQ6AHZ1 1483 aa34.73■■■■□ 3.15
LRTM2-211ENST00000546157 ATP10AO60312 1499 aa34.68■■■■□ 3.14
LRTM2-211ENST00000546157 ABCC1P33527 1531 aa34.68■■■■□ 3.14
LRTM2-211ENST00000546157 AFAP1Q8N556 730 aa34.68■■■■□ 3.14
LRTM2-211ENST00000546157 ARHGEF12Q9NZN5 1544 aa34.67■■■■□ 3.14
LRTM2-211ENST00000546157 ITSN2Q9NZM3 1697 aa34.66■■■■□ 3.14
LRTM2-211ENST00000546157 C9orf84Q5VXU9 1444 aa34.64■■■■□ 3.14
LRTM2-211ENST00000546157 CEP162Q5TB80 1403 aa34.64■■■■□ 3.14
LRTM2-211ENST00000546157 FER1L4A9Z1Z3 1794 aa34.63■■■■□ 3.13
LRTM2-211ENST00000546157 TRAPPC8Q9Y2L5 1435 aa34.61■■■■□ 3.13
LRTM2-211ENST00000546157 DIP2CQ9Y2E4 1556 aa34.6■■■■□ 3.13
LRTM2-211ENST00000546157 MLECQ14165 292 aa34.59■■■■□ 3.13
LRTM2-211ENST00000546157 ABCA6Q8N139 1617 aa34.58■■■■□ 3.13
LRTM2-211ENST00000546157 GPATCH8Q9UKJ3 1502 aaKnown RBP34.57■■■■□ 3.12
LRTM2-211ENST00000546157 SAMD9LQ8IVG5 1584 aa34.57■■■■□ 3.12
LRTM2-211ENST00000546157 MLH3Q9UHC1 1453 aa34.56■■■■□ 3.12
LRTM2-211ENST00000546157 REREQ9P2R6 1566 aa34.51■■■■□ 3.12
LRTM2-211ENST00000546157 KIDINS220Q9ULH0 1771 aa34.51■■■■□ 3.11
LRTM2-211ENST00000546157 LMTK3Q96Q04 1460 aa34.51■■■■□ 3.11
LRTM2-211ENST00000546157 MYT1LQ9UL68 1186 aa34.5■■■■□ 3.11
LRTM2-211ENST00000546157 MTUS2Q5JR59 1369 aa34.49■■■■□ 3.11
LRTM2-211ENST00000546157 SYCP2Q9BX26 1530 aa34.48■■■■□ 3.11
LRTM2-211ENST00000546157 PLPPR3Q6T4P5 718 aa34.47■■■■□ 3.11
LRTM2-211ENST00000546157 ZNF777Q9ULD5 760 aaPredicted RBP34.47■■■■□ 3.11
LRTM2-211ENST00000546157 EHBP1L1Q8N3D4 1523 aa34.45■■■■□ 3.1
LRTM2-211ENST00000546157 CCNB3Q8WWL7 1395 aa34.44■■■■□ 3.1
LRTM2-211ENST00000546157 TIAM1Q13009 1591 aa34.42■■■■□ 3.1
LRTM2-211ENST00000546157 LOC105371045A0A1W2PR82 267 aa34.42■■■■□ 3.1
LRTM2-211ENST00000546157 CFDP1Q9UEE9 299 aaPredicted RBP34.39■■■■□ 3.1
LRTM2-211ENST00000546157 HNRNPMP52272 730 aaKnown RBP eCLIP34.38■■■■□ 3.09
LRTM2-211ENST00000546157 AGLP35573 1532 aa34.38■■■■□ 3.09
LRTM2-211ENST00000546157 KIAA1107Q9UPP5 1409 aa34.36■■■■□ 3.09
LRTM2-211ENST00000546157 PLEKHH2Q8IVE3 1493 aa34.34■■■■□ 3.09
LRTM2-211ENST00000546157 INO80Q9ULG1 1556 aaPredicted RBP34.32■■■■□ 3.08
LRTM2-211ENST00000546157 ILDR1Q86SU0 546 aaPredicted RBP34.31■■■■□ 3.08
LRTM2-211ENST00000546157 CEBPAP49715 358 aaPredicted RBP34.3■■■■□ 3.08
LRTM2-211ENST00000546157 ATP7AQ04656 1500 aa34.3■■■■□ 3.08
LRTM2-211ENST00000546157 SPAG9O60271 1321 aaKnown RBP34.3■■■■□ 3.08
LRTM2-211ENST00000546157 HSPA2P54652 639 aa34.28■■■■□ 3.08
LRTM2-211ENST00000546157 PREX1Q8TCU6 1659 aa34.28■■■■□ 3.08
LRTM2-211ENST00000546157 SUPT6HQ7KZ85 1726 aaKnown RBP34.27■■■■□ 3.08
LRTM2-211ENST00000546157 ZNF644Q9H582 1327 aaPredicted RBP34.27■■■■□ 3.08
LRTM2-211ENST00000546157 VPS8Q8N3P4 1428 aa34.26■■■■□ 3.07
LRTM2-211ENST00000546157 C3P01024 1663 aa34.25■■■■□ 3.07
LRTM2-211ENST00000546157 NCOA2Q15596 1464 aa34.23■■■■□ 3.07
LRTM2-211ENST00000546157 MBD5Q9P267 1494 aa34.21■■■■□ 3.07
LRTM2-211ENST00000546157 PLXNC1O60486 1568 aa34.2■■■■□ 3.07
LRTM2-211ENST00000546157 SETD1BQ9UPS6 1966 aaKnown RBP34.17■■■■□ 3.06
LRTM2-211ENST00000546157 A2MP01023 1474 aa34.14■■■■□ 3.06
LRTM2-211ENST00000546157 ADGBQ8N7X0 1667 aa34.14■■■■□ 3.06
LRTM2-211ENST00000546157 LRRC9Q6ZRR7 1453 aa34.12■■■■□ 3.05
LRTM2-211ENST00000546157 ESF1Q9H501 851 aaKnown RBP34.11■■■■□ 3.05
LRTM2-211ENST00000546157 CAMSAP2Q08AD1 1489 aa34.11■■■■□ 3.05
LRTM2-211ENST00000546157 CNTLNQ9NXG0 1405 aa34.11■■■■□ 3.05
LRTM2-211ENST00000546157 MROH2AA6NES4 1674 aa34.1■■■■□ 3.05
LRTM2-211ENST00000546157 UHRF1BP1Q6BDS2 1440 aa34.07■■■■□ 3.04
LRTM2-211ENST00000546157 RTEL1-TNFRSF6BF6WH68 1400 aa34.05■■■■□ 3.04
LRTM2-211ENST00000546157 MAP3K1Q13233 1512 aa34.05■■■■□ 3.04
LRTM2-211ENST00000546157 CLTCQ00610 1675 aaKnown RBP34.05■■■■□ 3.04
LRTM2-211ENST00000546157 CCDC141Q6ZP82 1450 aa34.04■■■■□ 3.04
LRTM2-211ENST00000546157 STRCQ7RTU9 1775 aa34.03■■■■□ 3.04
LRTM2-211ENST00000546157 KANK4Q5T7N3 995 aaPredicted RBP34.02■■■■□ 3.04
LRTM2-211ENST00000546157 ARHGEF5Q12774 1597 aa33.98■■■■□ 3.03
LRTM2-211ENST00000546157 ZMYM3Q14202 1370 aa33.98■■■■□ 3.03
LRTM2-211ENST00000546157 GGT6Q6P531 493 aa33.95■■■■□ 3.03
LRTM2-211ENST00000546157 DHX29Q7Z478 1369 aaKnown RBP33.94■■■■□ 3.02
LRTM2-211ENST00000546157 NPATQ14207 1427 aa33.93■■■■□ 3.02
LRTM2-211ENST00000546157 RSPH4AQ5TD94 716 aa33.91■■■■□ 3.02
LRTM2-211ENST00000546157 FBXO41Q8TF61 875 aa33.9■■■■□ 3.02
LRTM2-211ENST00000546157 MYOM3Q5VTT5 1437 aa33.87■■■■□ 3.01
LRTM2-211ENST00000546157 PTPRKQ15262 1439 aa33.85■■■■□ 3.01
LRTM2-211ENST00000546157 MYO3AQ8NEV4 1616 aa33.83■■■■□ 3.01
LRTM2-211ENST00000546157 MIA2Q96PC5 1412 aa33.83■■■■□ 3.01
LRTM2-211ENST00000546157 PPP6R1Q9UPN7 881 aa33.83■■■■□ 3.01
LRTM2-211ENST00000546157 MAST1Q9Y2H9 1570 aa33.82■■■■□ 3
LRTM2-211ENST00000546157 KIF3BO15066 747 aa33.81■■■■□ 3
LRTM2-211ENST00000546157 ZNF142P52746 1687 aaPredicted RBP33.8■■■■□ 3
LRTM2-211ENST00000546157 TSPY4P0CV99 314 aa33.8■■■■□ 3
LRTM2-211ENST00000546157 TSPY10P0CW01 314 aa33.8■■■■□ 3
LRTM2-211ENST00000546157 NCOA1Q15788 1441 aa33.78■■■■□ 3
LRTM2-211ENST00000546157 DMRT2Q9Y5R5 561 aa33.77■■■■□ 3
LRTM2-211ENST00000546157 CAMSAP1Q5T5Y3 1602 aa33.76■■■■□ 3
LRTM2-211ENST00000546157 KDM5DQ9BY66 1539 aa33.74■■■□□ 2.99
LRTM2-211ENST00000546157 PTPRTO14522 1441 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms