RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 TMEM121BQ9BXQ6 578 aaPredicted RBP6.69□□□□□ -1.34
KNTC1-215ENST00000546125 GTPBP6O43824 516 aaPredicted RBP6.68□□□□□ -1.34
KNTC1-215ENST00000546125 SPNS2Q8IVW8 549 aa6.68□□□□□ -1.34
KNTC1-215ENST00000546125 RYDENQ9NUL5 291 aaKnown RBP6.68□□□□□ -1.34
KNTC1-215ENST00000546125 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.67□□□□□ -1.34
KNTC1-215ENST00000546125 TMEM92Q6UXU6 159 aa6.64□□□□□ -1.35
KNTC1-215ENST00000546125 PAXIP1Q6ZW49 1069 aaPredicted RBP6.63□□□□□ -1.35
KNTC1-215ENST00000546125 SPRYD3Q8NCJ5 442 aa6.63□□□□□ -1.35
KNTC1-215ENST00000546125 CFAP44Q96MT7 982 aa6.63□□□□□ -1.35
KNTC1-215ENST00000546125 SNPHO15079 494 aa6.6□□□□□ -1.35
KNTC1-215ENST00000546125 TMC2Q8TDI7 906 aa6.6□□□□□ -1.35
KNTC1-215ENST00000546125 C2orf72A6NCS6 295 aa6.59□□□□□ -1.35
KNTC1-215ENST00000546125 KIF3CO14782 793 aa6.56□□□□□ -1.36
KNTC1-215ENST00000546125 HOXB3P14651 431 aaPredicted RBP6.55□□□□□ -1.36
KNTC1-215ENST00000546125 PDE4AP27815 886 aa6.54□□□□□ -1.36
KNTC1-215ENST00000546125 DOK7Q18PE1 504 aa6.54□□□□□ -1.36
KNTC1-215ENST00000546125 CADPS2Q86UW7 1296 aa6.54□□□□□ -1.36
KNTC1-215ENST00000546125 ZNF710Q8N1W2 664 aa6.54□□□□□ -1.36
KNTC1-215ENST00000546125 MARVELD3Q96A59 401 aa6.54□□□□□ -1.36
KNTC1-215ENST00000546125 GPHNQ9NQX3 736 aaPredicted RBP6.54□□□□□ -1.36
KNTC1-215ENST00000546125 LARP6Q9BRS8 491 aaKnown RBP6.53□□□□□ -1.36
KNTC1-215ENST00000546125 DSG2Q14126 1118 aa6.52□□□□□ -1.37
KNTC1-215ENST00000546125 PLPP6Q8IY26 295 aa6.52□□□□□ -1.37
KNTC1-215ENST00000546125 NCKAP5LQ9HCH0 1330 aa6.51□□□□□ -1.37
KNTC1-215ENST00000546125 RIMBP2O15034 1052 aa6.51□□□□□ -1.37
KNTC1-215ENST00000546125 FOXK1P85037 733 aa6.51□□□□□ -1.37
KNTC1-215ENST00000546125 CRISPLD2Q9H0B8 497 aa6.51□□□□□ -1.37
KNTC1-215ENST00000546125 ARSIQ5FYB1 569 aa6.49□□□□□ -1.37
KNTC1-215ENST00000546125 TSHZ2Q9NRE2 1034 aa6.49□□□□□ -1.37
KNTC1-215ENST00000546125 PPP1R15BQ5SWA1 713 aa6.48□□□□□ -1.37
KNTC1-215ENST00000546125 DDX27Q96GQ7 796 aaKnown RBP6.48□□□□□ -1.37
KNTC1-215ENST00000546125 EMP3P54852 163 aa6.47□□□□□ -1.37
KNTC1-215ENST00000546125 KHSRPQ92945 711 aaKnown RBP eCLIP6.47□□□□□ -1.377e-7■■□□□ 14.2
KNTC1-215ENST00000546125 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
KNTC1-215ENST00000546125 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
KNTC1-215ENST00000546125 HOXB1P14653 301 aaPredicted RBP6.46□□□□□ -1.38
KNTC1-215ENST00000546125 PLCB2Q00722 1185 aa6.46□□□□□ -1.38
KNTC1-215ENST00000546125 GPR153Q6NV75 609 aa6.46□□□□□ -1.38
KNTC1-215ENST00000546125 ZSWIM6Q9HCJ5 1215 aa6.46□□□□□ -1.38
KNTC1-215ENST00000546125 SLC34A2O95436 690 aa6.45□□□□□ -1.38
KNTC1-215ENST00000546125 UPF1Q92900 1129 aaKnown RBP eCLIP6.45□□□□□ -1.38
KNTC1-215ENST00000546125 PCDHGA4Q9Y5G9 962 aa6.45□□□□□ -1.38
KNTC1-215ENST00000546125 POTEB3A0JP26 581 aa6.44□□□□□ -1.38
KNTC1-215ENST00000546125 FAM205CA6NFA0 338 aa6.44□□□□□ -1.38
KNTC1-215ENST00000546125 MFSD10Q14728 455 aa6.44□□□□□ -1.38
KNTC1-215ENST00000546125 POTEBQ6S5H4 581 aa6.44□□□□□ -1.38
KNTC1-215ENST00000546125 HS3ST6Q96QI5 342 aa6.44□□□□□ -1.38
KNTC1-215ENST00000546125 WDR70Q9NW82 654 aa6.44□□□□□ -1.38
KNTC1-215ENST00000546125 TBC1D12O60347 775 aa6.43□□□□□ -1.38
KNTC1-215ENST00000546125 NUDT7P0C024 238 aa6.43□□□□□ -1.38
KNTC1-215ENST00000546125 PTCD2Q8WV60 388 aaKnown RBP6.43□□□□□ -1.38
KNTC1-215ENST00000546125 ERBB3P21860 1342 aa6.43□□□□□ -1.38
KNTC1-215ENST00000546125 HAP1P54257 671 aaPredicted RBP6.42□□□□□ -1.38
KNTC1-215ENST00000546125 MAP3K9P80192 1104 aa6.4□□□□□ -1.38
KNTC1-215ENST00000546125 OXER1Q8TDS5 423 aa6.4□□□□□ -1.38
KNTC1-215ENST00000546125 VARS2Q5ST30 1063 aaKnown RBP6.39□□□□□ -1.39
KNTC1-215ENST00000546125 EMILIN3Q9NT22 766 aa6.39□□□□□ -1.39
KNTC1-215ENST00000546125 ZNF316A6NFI3 1004 aaPredicted RBP6.38□□□□□ -1.39
KNTC1-215ENST00000546125 LHX6Q9UPM6 363 aa6.38□□□□□ -1.39
KNTC1-215ENST00000546125 CAMK2BQ13554 666 aa6.37□□□□□ -1.39
KNTC1-215ENST00000546125 E2F4Q16254 413 aa6.37□□□□□ -1.39
KNTC1-215ENST00000546125 EVI5O60447 810 aa6.36□□□□□ -1.39
KNTC1-215ENST00000546125 KDM4FA0A1W2PPD8 638 aa6.35□□□□□ -1.39
KNTC1-215ENST00000546125 DPYSL4O14531 572 aa6.35□□□□□ -1.39
KNTC1-215ENST00000546125 ZNF687Q8N1G0 1237 aa6.32□□□□□ -1.4
KNTC1-215ENST00000546125 RNF166Q96A37 237 aaPredicted RBP6.32□□□□□ -1.4
KNTC1-215ENST00000546125 ANO8Q9HCE9 1232 aaPredicted RBP6.32□□□□□ -1.4
KNTC1-215ENST00000546125 ZNF454Q8N9F8 522 aa6.31□□□□□ -1.4
KNTC1-215ENST00000546125 PSDA5PKW4 1024 aaPredicted RBP6.3□□□□□ -1.4
KNTC1-215ENST00000546125 PPP4R3BQ5MIZ7 849 aa6.3□□□□□ -1.4
KNTC1-215ENST00000546125 KDM2AQ9Y2K7 1162 aa6.3□□□□□ -1.4
KNTC1-215ENST00000546125 AXIN2Q9Y2T1 843 aa6.29□□□□□ -1.4
KNTC1-215ENST00000546125 SPDYE16A6NNV3 312 aaPredicted RBP6.28□□□□□ -1.4
KNTC1-215ENST00000546125 FOSBP53539 338 aa6.28□□□□□ -1.4
KNTC1-215ENST00000546125 VSIG10Q8N0Z9 540 aa6.27□□□□□ -1.41
KNTC1-215ENST00000546125 KCNV2Q8TDN2 545 aa6.27□□□□□ -1.41
KNTC1-215ENST00000546125 DDX12PQ92771 950 aa6.27□□□□□ -1.41
KNTC1-215ENST00000546125 POTEEQ6S8J3 1075 aa6.26□□□□□ -1.41
KNTC1-215ENST00000546125 ANKRD13DQ6ZTN6 518 aa6.26□□□□□ -1.41
KNTC1-215ENST00000546125 ARHGEF1Q92888 912 aaKnown RBP6.26□□□□□ -1.41
KNTC1-215ENST00000546125 MYT1LQ9UL68 1186 aa6.26□□□□□ -1.41
KNTC1-215ENST00000546125 ARIH1Q9Y4X5 557 aaPredicted RBP6.26□□□□□ -1.41
KNTC1-215ENST00000546125 PSEN2P49810 448 aa6.25□□□□□ -1.41
KNTC1-215ENST00000546125 PDIA6Q15084 440 aa6.25□□□□□ -1.41
KNTC1-215ENST00000546125 ZDHHC16Q969W1 377 aa6.25□□□□□ -1.41
KNTC1-215ENST00000546125 JPH4Q96JJ6 628 aa6.25□□□□□ -1.41
KNTC1-215ENST00000546125 PCDHGA10Q9Y5H3 936 aa6.25□□□□□ -1.41
KNTC1-215ENST00000546125 GRXCR2A6NFK2 248 aa6.24□□□□□ -1.41
KNTC1-215ENST00000546125 ARHGAP33O14559 1287 aa6.24□□□□□ -1.41
KNTC1-215ENST00000546125 PHF14O94880 888 aa6.24□□□□□ -1.41
KNTC1-215ENST00000546125 PBX2P40425 430 aa6.24□□□□□ -1.41
KNTC1-215ENST00000546125 PTGER2P43116 358 aa6.24□□□□□ -1.41
KNTC1-215ENST00000546125 P3H3Q8IVL6 736 aa6.24□□□□□ -1.41
KNTC1-215ENST00000546125 RBM33Q96EV2 1170 aaKnown RBP6.24□□□□□ -1.41
KNTC1-215ENST00000546125 KCNK17Q96T54 332 aa6.24□□□□□ -1.41
KNTC1-215ENST00000546125 ADAM33Q9BZ11 813 aa6.24□□□□□ -1.41
KNTC1-215ENST00000546125 LSM11P83369 360 aaKnown RBP eCLIP6.23□□□□□ -1.41
KNTC1-215ENST00000546125 TYW1BQ6NUM6 668 aa6.23□□□□□ -1.41
KNTC1-215ENST00000546125 KCNH8Q96L42 1107 aa6.23□□□□□ -1.41
KNTC1-215ENST00000546125 EPAS1Q99814 870 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms