RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 GPATCH8Q9UKJ3 1502 aaKnown RBP16.7■□□□□ 0.26
PAAF1-216ENST00000546039 MYOM3Q5VTT5 1437 aa16.69■□□□□ 0.26
PAAF1-216ENST00000546039 FANCAO15360 1455 aa16.67■□□□□ 0.26
PAAF1-216ENST00000546039 NEO1Q92859 1461 aa16.67■□□□□ 0.26
PAAF1-216ENST00000546039 SAMD9LQ8IVG5 1584 aa16.66■□□□□ 0.26
PAAF1-216ENST00000546039 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
PAAF1-216ENST00000546039 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
PAAF1-216ENST00000546039 MIA2Q96PC5 1412 aa16.64■□□□□ 0.25
PAAF1-216ENST00000546039 PPARGC1BQ86YN6 1023 aaKnown RBP16.64■□□□□ 0.25
PAAF1-216ENST00000546039 ABCC1P33527 1531 aa16.64■□□□□ 0.25
PAAF1-216ENST00000546039 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
PAAF1-216ENST00000546039 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
PAAF1-216ENST00000546039 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
PAAF1-216ENST00000546039 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
PAAF1-216ENST00000546039 CFDP1Q9UEE9 299 aaPredicted RBP16.61■□□□□ 0.25
PAAF1-216ENST00000546039 AKNAQ7Z591 1439 aa16.61■□□□□ 0.25
PAAF1-216ENST00000546039 RICTORQ6R327 1708 aa16.6■□□□□ 0.25
PAAF1-216ENST00000546039 ADGRL1O94910 1474 aa16.6■□□□□ 0.25
PAAF1-216ENST00000546039 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
PAAF1-216ENST00000546039 SYCP2Q9BX26 1530 aa16.59■□□□□ 0.25
PAAF1-216ENST00000546039 KDM6BO15054 1643 aa16.59■□□□□ 0.25
PAAF1-216ENST00000546039 CROCC2H7BZ55 1655 aa16.58■□□□□ 0.24
PAAF1-216ENST00000546039 ARHGEF5Q12774 1597 aa16.57■□□□□ 0.24
PAAF1-216ENST00000546039 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
PAAF1-216ENST00000546039 KIAA1107Q9UPP5 1409 aa16.55■□□□□ 0.24
PAAF1-216ENST00000546039 DNMT1P26358 1616 aaKnown RBP16.55■□□□□ 0.24
PAAF1-216ENST00000546039 FRMPD1Q5SYB0 1578 aa16.55■□□□□ 0.24
PAAF1-216ENST00000546039 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
PAAF1-216ENST00000546039 DENND4BO75064 1496 aaPredicted RBP16.54■□□□□ 0.24
PAAF1-216ENST00000546039 POGZQ7Z3K3 1410 aa16.53■□□□□ 0.24
PAAF1-216ENST00000546039 SCAPERQ9BY12 1400 aa16.53■□□□□ 0.24
PAAF1-216ENST00000546039 KDM5CP41229 1560 aa16.52■□□□□ 0.24
PAAF1-216ENST00000546039 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
PAAF1-216ENST00000546039 ZNF518AQ6AHZ1 1483 aa16.52■□□□□ 0.23
PAAF1-216ENST00000546039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
PAAF1-216ENST00000546039 ZMYM4Q5VZL5 1548 aa16.51■□□□□ 0.23
PAAF1-216ENST00000546039 CCDC141Q6ZP82 1450 aa16.51■□□□□ 0.23
PAAF1-216ENST00000546039 ADGBQ8N7X0 1667 aa16.5■□□□□ 0.23
PAAF1-216ENST00000546039 MBD5Q9P267 1494 aa16.5■□□□□ 0.23
PAAF1-216ENST00000546039 HECW2Q9P2P5 1572 aa16.5■□□□□ 0.23
PAAF1-216ENST00000546039 ZNF644Q9H582 1327 aaPredicted RBP16.49■□□□□ 0.23
PAAF1-216ENST00000546039 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
PAAF1-216ENST00000546039 MAST1Q9Y2H9 1570 aa16.48■□□□□ 0.23
PAAF1-216ENST00000546039 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
PAAF1-216ENST00000546039 TRAPPC8Q9Y2L5 1435 aa16.47■□□□□ 0.23
PAAF1-216ENST00000546039 SHANK2Q9UPX8 1470 aa16.47■□□□□ 0.23
PAAF1-216ENST00000546039 KIDINS220Q9ULH0 1771 aa16.46■□□□□ 0.23
PAAF1-216ENST00000546039 DAPK1P53355 1430 aa16.45■□□□□ 0.22
PAAF1-216ENST00000546039 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.22
PAAF1-216ENST00000546039 FAM50AQ14320 339 aaKnown RBP16.45■□□□□ 0.22
PAAF1-216ENST00000546039 RSPH4AQ5TD94 716 aa16.45■□□□□ 0.22
PAAF1-216ENST00000546039 ATP7AQ04656 1500 aa16.45■□□□□ 0.22
PAAF1-216ENST00000546039 ZFYVE16Q7Z3T8 1539 aa16.45■□□□□ 0.22
PAAF1-216ENST00000546039 ARHGEF40Q8TER5 1519 aa16.44■□□□□ 0.22
PAAF1-216ENST00000546039 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
PAAF1-216ENST00000546039 MAGI2Q86UL8 1455 aa16.43■□□□□ 0.22
PAAF1-216ENST00000546039 ABCC5O15440 1437 aa16.43■□□□□ 0.22
PAAF1-216ENST00000546039 MLH3Q9UHC1 1453 aa16.42■□□□□ 0.22
PAAF1-216ENST00000546039 ABCA6Q8N139 1617 aa16.41■□□□□ 0.22
PAAF1-216ENST00000546039 RAPGEF3O95398 923 aa16.41■□□□□ 0.22
PAAF1-216ENST00000546039 RTEL1-TNFRSF6BF6WH68 1400 aa16.4■□□□□ 0.22
PAAF1-216ENST00000546039 C9orf84Q5VXU9 1444 aa16.4■□□□□ 0.22
PAAF1-216ENST00000546039 DIP2CQ9Y2E4 1556 aa16.39■□□□□ 0.21
PAAF1-216ENST00000546039 AFAP1Q8N556 730 aa16.39■□□□□ 0.21
PAAF1-216ENST00000546039 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
PAAF1-216ENST00000546039 SPAG9O60271 1321 aaKnown RBP16.38■□□□□ 0.21
PAAF1-216ENST00000546039 GCC2Q8IWJ2 1684 aa16.37■□□□□ 0.21
PAAF1-216ENST00000546039 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
PAAF1-216ENST00000546039 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
PAAF1-216ENST00000546039 REREQ9P2R6 1566 aa16.36■□□□□ 0.21
PAAF1-216ENST00000546039 PTPRKQ15262 1439 aa16.34■□□□□ 0.21
PAAF1-216ENST00000546039 ROCK1Q13464 1354 aa16.33■□□□□ 0.2
PAAF1-216ENST00000546039 YEATS2Q9ULM3 1422 aa16.33■□□□□ 0.2
PAAF1-216ENST00000546039 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
PAAF1-216ENST00000546039 EIF2AK4Q9P2K8 1649 aaKnown RBP16.32■□□□□ 0.2
PAAF1-216ENST00000546039 MYT1LQ9UL68 1186 aa16.32■□□□□ 0.2
PAAF1-216ENST00000546039 BCORL1Q5H9F3 1711 aa16.31■□□□□ 0.2
PAAF1-216ENST00000546039 DUOX2Q9NRD8 1548 aa16.31■□□□□ 0.2
PAAF1-216ENST00000546039 ATP10AO60312 1499 aa16.31■□□□□ 0.2
PAAF1-216ENST00000546039 ITGAEP38570 1179 aa16.31■□□□□ 0.2
PAAF1-216ENST00000546039 NCOA1Q15788 1441 aa16.3■□□□□ 0.2
PAAF1-216ENST00000546039 A2MP01023 1474 aa16.29■□□□□ 0.2
PAAF1-216ENST00000546039 SIGLEC1Q9BZZ2 1709 aa16.29■□□□□ 0.2
PAAF1-216ENST00000546039 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
PAAF1-216ENST00000546039 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
PAAF1-216ENST00000546039 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
PAAF1-216ENST00000546039 AGLP35573 1532 aa16.26■□□□□ 0.19
PAAF1-216ENST00000546039 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
PAAF1-216ENST00000546039 RNF17Q9BXT8 1623 aaKnown RBP16.25■□□□□ 0.19
PAAF1-216ENST00000546039 HFM1A2PYH4 1435 aa16.25■□□□□ 0.19
PAAF1-216ENST00000546039 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
PAAF1-216ENST00000546039 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
PAAF1-216ENST00000546039 NAIPQ13075 1403 aa16.22■□□□□ 0.19
PAAF1-216ENST00000546039 RRP7BPQ9NSQ0 103 aa16.22■□□□□ 0.19
PAAF1-216ENST00000546039 ANKRD50Q9ULJ7 1429 aa16.21■□□□□ 0.19
PAAF1-216ENST00000546039 UNC13BO14795 1591 aa16.21■□□□□ 0.18
PAAF1-216ENST00000546039 FER1L4A9Z1Z3 1794 aa16.19■□□□□ 0.18
PAAF1-216ENST00000546039 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
PAAF1-216ENST00000546039 MROH1Q8NDA8 1641 aa16.18■□□□□ 0.18
PAAF1-216ENST00000546039 PRDM15P57071 1507 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms