RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 PLCH2O75038 1416 aa26.14■■□□□ 1.77
CADM1-220ENST00000546000 CD109Q6YHK3 1445 aa26.14■■□□□ 1.77
CADM1-220ENST00000546000 ZNF644Q9H582 1327 aaPredicted RBP26.12■■□□□ 1.77
CADM1-220ENST00000546000 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
CADM1-220ENST00000546000 CFDP1Q9UEE9 299 aaPredicted RBP26.11■■□□□ 1.77
CADM1-220ENST00000546000 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
CADM1-220ENST00000546000 CAMSAP2Q08AD1 1489 aa26.11■■□□□ 1.77
CADM1-220ENST00000546000 TCOF1Q13428 1488 aaKnown RBP26.1■■□□□ 1.77
CADM1-220ENST00000546000 PPRC1Q5VV67 1664 aaKnown RBP26.09■■□□□ 1.77
CADM1-220ENST00000546000 TSPOAP1O95153 1857 aa26.09■■□□□ 1.77
CADM1-220ENST00000546000 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
CADM1-220ENST00000546000 ARAP3Q8WWN8 1544 aa26.08■■□□□ 1.77
CADM1-220ENST00000546000 FAM50AQ14320 339 aaKnown RBP26.07■■□□□ 1.76
CADM1-220ENST00000546000 FANCAO15360 1455 aa26.05■■□□□ 1.76
CADM1-220ENST00000546000 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
CADM1-220ENST00000546000 ABCC1P33527 1531 aa26.02■■□□□ 1.76
CADM1-220ENST00000546000 SYCP2Q9BX26 1530 aa26.02■■□□□ 1.76
CADM1-220ENST00000546000 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.75
CADM1-220ENST00000546000 ARHGEF12Q9NZN5 1544 aa25.99■■□□□ 1.75
CADM1-220ENST00000546000 EFCAB2Q5VUJ9 269 aa25.99■■□□□ 1.75
CADM1-220ENST00000546000 CFAP74Q9C0B2 1584 aa25.99■■□□□ 1.75
CADM1-220ENST00000546000 ITGAEP38570 1179 aa25.96■■□□□ 1.75
CADM1-220ENST00000546000 AKNAQ7Z591 1439 aa25.96■■□□□ 1.75
CADM1-220ENST00000546000 DNMT1P26358 1616 aaKnown RBP25.95■■□□□ 1.74
CADM1-220ENST00000546000 ADGRL1O94910 1474 aa25.94■■□□□ 1.74
CADM1-220ENST00000546000 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.94■■□□□ 1.74
CADM1-220ENST00000546000 MBD5Q9P267 1494 aa25.93■■□□□ 1.74
CADM1-220ENST00000546000 HNRNPMP52272 730 aaKnown RBP eCLIP25.93■■□□□ 1.74
CADM1-220ENST00000546000 NEO1Q92859 1461 aa25.92■■□□□ 1.74
CADM1-220ENST00000546000 PTPRKQ15262 1439 aa25.92■■□□□ 1.74
CADM1-220ENST00000546000 ABCC5O15440 1437 aa25.91■■□□□ 1.74
CADM1-220ENST00000546000 DAPK1P53355 1430 aa25.91■■□□□ 1.74
CADM1-220ENST00000546000 CROCC2H7BZ55 1655 aa25.91■■□□□ 1.74
CADM1-220ENST00000546000 PLEKHH2Q8IVE3 1493 aa25.91■■□□□ 1.74
CADM1-220ENST00000546000 TEX14Q8IWB6 1497 aa25.91■■□□□ 1.74
CADM1-220ENST00000546000 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
CADM1-220ENST00000546000 ARHGEF5Q12774 1597 aa25.9■■□□□ 1.74
CADM1-220ENST00000546000 TRAPPC8Q9Y2L5 1435 aa25.89■■□□□ 1.74
CADM1-220ENST00000546000 SCAPERQ9BY12 1400 aa25.88■■□□□ 1.73
CADM1-220ENST00000546000 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
CADM1-220ENST00000546000 CCDC141Q6ZP82 1450 aa25.87■■□□□ 1.73
CADM1-220ENST00000546000 FRMPD1Q5SYB0 1578 aa25.83■■□□□ 1.73
CADM1-220ENST00000546000 POGZQ7Z3K3 1410 aa25.82■■□□□ 1.72
CADM1-220ENST00000546000 CHIC2Q9UKJ5 165 aa25.81■■□□□ 1.72
CADM1-220ENST00000546000 RICTORQ6R327 1708 aa25.8■■□□□ 1.72
CADM1-220ENST00000546000 C9orf84Q5VXU9 1444 aa25.8■■□□□ 1.72
CADM1-220ENST00000546000 DENND4BO75064 1496 aaPredicted RBP25.79■■□□□ 1.72
CADM1-220ENST00000546000 AFAP1Q8N556 730 aa25.79■■□□□ 1.72
CADM1-220ENST00000546000 COL17A1Q9UMD9 1497 aaPredicted RBP25.79■■□□□ 1.72
CADM1-220ENST00000546000 SHANK2Q9UPX8 1470 aa25.79■■□□□ 1.72
CADM1-220ENST00000546000 ADGBQ8N7X0 1667 aa25.77■■□□□ 1.72
CADM1-220ENST00000546000 RAPGEF3O95398 923 aa25.76■■□□□ 1.71
CADM1-220ENST00000546000 KDM5CP41229 1560 aa25.75■■□□□ 1.71
CADM1-220ENST00000546000 MAST1Q9Y2H9 1570 aa25.75■■□□□ 1.71
CADM1-220ENST00000546000 ZFYVE16Q7Z3T8 1539 aa25.75■■□□□ 1.71
CADM1-220ENST00000546000 ZNF518AQ6AHZ1 1483 aa25.75■■□□□ 1.71
CADM1-220ENST00000546000 INO80Q9ULG1 1556 aaPredicted RBP25.74■■□□□ 1.71
CADM1-220ENST00000546000 ADGRL2O95490 1459 aa25.72■■□□□ 1.71
CADM1-220ENST00000546000 ATP7AQ04656 1500 aa25.7■■□□□ 1.7
CADM1-220ENST00000546000 HECW2Q9P2P5 1572 aa25.69■■□□□ 1.7
CADM1-220ENST00000546000 SPAG9O60271 1321 aaKnown RBP25.69■■□□□ 1.7
CADM1-220ENST00000546000 RRP7BPQ9NSQ0 103 aa25.69■■□□□ 1.7
CADM1-220ENST00000546000 KDM6BO15054 1643 aa25.68■■□□□ 1.7
CADM1-220ENST00000546000 KIDINS220Q9ULH0 1771 aa25.68■■□□□ 1.7
CADM1-220ENST00000546000 TSPY4P0CV99 314 aa25.67■■□□□ 1.7
CADM1-220ENST00000546000 TSPY10P0CW01 314 aa25.67■■□□□ 1.7
CADM1-220ENST00000546000 RSPH4AQ5TD94 716 aa25.67■■□□□ 1.7
CADM1-220ENST00000546000 ZMYM4Q5VZL5 1548 aa25.67■■□□□ 1.7
CADM1-220ENST00000546000 PLXNC1O60486 1568 aa25.66■■□□□ 1.7
CADM1-220ENST00000546000 GCC2Q8IWJ2 1684 aa25.66■■□□□ 1.7
CADM1-220ENST00000546000 ROCK1Q13464 1354 aa25.66■■□□□ 1.7
CADM1-220ENST00000546000 NCOA1Q15788 1441 aa25.65■■□□□ 1.7
CADM1-220ENST00000546000 ABCA6Q8N139 1617 aa25.65■■□□□ 1.7
CADM1-220ENST00000546000 NAIPQ13075 1403 aa25.63■■□□□ 1.69
CADM1-220ENST00000546000 ANKRD30AQ9BXX3 1397 aa25.63■■□□□ 1.69
CADM1-220ENST00000546000 HFM1A2PYH4 1435 aa25.63■■□□□ 1.69
CADM1-220ENST00000546000 YEATS2Q9ULM3 1422 aa25.63■■□□□ 1.69
CADM1-220ENST00000546000 MLH3Q9UHC1 1453 aa25.62■■□□□ 1.69
CADM1-220ENST00000546000 KIF15Q9NS87 1388 aa25.62■■□□□ 1.69
CADM1-220ENST00000546000 MYT1LQ9UL68 1186 aa25.61■■□□□ 1.69
CADM1-220ENST00000546000 RTEL1-TNFRSF6BF6WH68 1400 aa25.61■■□□□ 1.69
CADM1-220ENST00000546000 DIP2CQ9Y2E4 1556 aa25.6■■□□□ 1.69
CADM1-220ENST00000546000 SETD5Q9C0A6 1442 aa25.57■■□□□ 1.68
CADM1-220ENST00000546000 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
CADM1-220ENST00000546000 ARHGEF40Q8TER5 1519 aa25.55■■□□□ 1.68
CADM1-220ENST00000546000 DUOX2Q9NRD8 1548 aa25.53■■□□□ 1.68
CADM1-220ENST00000546000 MAGI2Q86UL8 1455 aa25.5■■□□□ 1.67
CADM1-220ENST00000546000 ANKRD50Q9ULJ7 1429 aa25.5■■□□□ 1.67
CADM1-220ENST00000546000 A2MP01023 1474 aa25.49■■□□□ 1.67
CADM1-220ENST00000546000 SIGLEC1Q9BZZ2 1709 aa25.48■■□□□ 1.67
CADM1-220ENST00000546000 ERBINQ96RT1 1412 aa25.46■■□□□ 1.67
CADM1-220ENST00000546000 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
CADM1-220ENST00000546000 ATP10AO60312 1499 aa25.42■■□□□ 1.66
CADM1-220ENST00000546000 EIF2AK4Q9P2K8 1649 aaKnown RBP25.4■■□□□ 1.66
CADM1-220ENST00000546000 REREQ9P2R6 1566 aa25.39■■□□□ 1.65
CADM1-220ENST00000546000 UNC13BO14795 1591 aa25.38■■□□□ 1.65
CADM1-220ENST00000546000 MROH1Q8NDA8 1641 aa25.37■■□□□ 1.65
CADM1-220ENST00000546000 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
CADM1-220ENST00000546000 BCORL1Q5H9F3 1711 aa25.34■■□□□ 1.65
CADM1-220ENST00000546000 RNF17Q9BXT8 1623 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms