RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NCOA2Q15596 1464 aa32.08■■■□□ 2.73
HMGA2-211ENST00000545998 COL17A1Q9UMD9 1497 aaPredicted RBP32.08■■■□□ 2.73
HMGA2-211ENST00000545998 GPATCH8Q9UKJ3 1502 aaKnown RBP32.07■■■□□ 2.73
HMGA2-211ENST00000545998 ARHGAP5Q13017 1502 aa32.07■■■□□ 2.72
HMGA2-211ENST00000545998 CCNB3Q8WWL7 1395 aa32.05■■■□□ 2.72
HMGA2-211ENST00000545998 AKNAQ7Z591 1439 aa32.05■■■□□ 2.72
HMGA2-211ENST00000545998 EFCAB2Q5VUJ9 269 aa32.03■■■□□ 2.72
HMGA2-211ENST00000545998 ITSN2Q9NZM3 1697 aa32■■■□□ 2.71
HMGA2-211ENST00000545998 ADGRL1O94910 1474 aa31.95■■■□□ 2.71
HMGA2-211ENST00000545998 CFDP1Q9UEE9 299 aaPredicted RBP31.94■■■□□ 2.7
HMGA2-211ENST00000545998 SAMD9LQ8IVG5 1584 aa31.91■■■□□ 2.7
HMGA2-211ENST00000545998 DENND4BO75064 1496 aaPredicted RBP31.9■■■□□ 2.7
HMGA2-211ENST00000545998 SCAPERQ9BY12 1400 aa31.9■■■□□ 2.7
HMGA2-211ENST00000545998 RICTORQ6R327 1708 aa31.9■■■□□ 2.7
HMGA2-211ENST00000545998 FRMPD1Q5SYB0 1578 aa31.89■■■□□ 2.7
HMGA2-211ENST00000545998 ABCC1P33527 1531 aa31.88■■■□□ 2.69
HMGA2-211ENST00000545998 RAPGEF3O95398 923 aa31.88■■■□□ 2.69
HMGA2-211ENST00000545998 ZNF777Q9ULD5 760 aaPredicted RBP31.86■■■□□ 2.69
HMGA2-211ENST00000545998 MYOM3Q5VTT5 1437 aa31.85■■■□□ 2.69
HMGA2-211ENST00000545998 ARHGEF12Q9NZN5 1544 aa31.84■■■□□ 2.69
HMGA2-211ENST00000545998 POGZQ7Z3K3 1410 aa31.83■■■□□ 2.69
HMGA2-211ENST00000545998 PLEKHH2Q8IVE3 1493 aa31.8■■■□□ 2.68
HMGA2-211ENST00000545998 ZNF644Q9H582 1327 aaPredicted RBP31.8■■■□□ 2.68
HMGA2-211ENST00000545998 MIA2Q96PC5 1412 aa31.79■■■□□ 2.68
HMGA2-211ENST00000545998 SYCP2Q9BX26 1530 aa31.79■■■□□ 2.68
HMGA2-211ENST00000545998 KIAA1107Q9UPP5 1409 aa31.79■■■□□ 2.68
HMGA2-211ENST00000545998 ZNF518AQ6AHZ1 1483 aa31.78■■■□□ 2.68
HMGA2-211ENST00000545998 PPARGC1BQ86YN6 1023 aaKnown RBP31.77■■■□□ 2.68
HMGA2-211ENST00000545998 CAMSAP2Q08AD1 1489 aa31.76■■■□□ 2.68
HMGA2-211ENST00000545998 ZMYM4Q5VZL5 1548 aa31.76■■■□□ 2.67
HMGA2-211ENST00000545998 TRAPPC8Q9Y2L5 1435 aa31.75■■■□□ 2.67
HMGA2-211ENST00000545998 KDM5CP41229 1560 aa31.74■■■□□ 2.67
HMGA2-211ENST00000545998 HNRNPMP52272 730 aaKnown RBP eCLIP31.73■■■□□ 2.67
HMGA2-211ENST00000545998 AFAP1Q8N556 730 aa31.73■■■□□ 2.67
HMGA2-211ENST00000545998 FGD6Q6ZV73 1430 aa31.71■■■□□ 2.67
HMGA2-211ENST00000545998 MBD5Q9P267 1494 aa31.71■■■□□ 2.67
HMGA2-211ENST00000545998 PTPN23Q9H3S7 1636 aa31.68■■■□□ 2.66
HMGA2-211ENST00000545998 MAGI2Q86UL8 1455 aa31.67■■■□□ 2.66
HMGA2-211ENST00000545998 HECW2Q9P2P5 1572 aa31.64■■■□□ 2.66
HMGA2-211ENST00000545998 ARHGEF40Q8TER5 1519 aa31.63■■■□□ 2.65
HMGA2-211ENST00000545998 TCOF1Q13428 1488 aaKnown RBP31.63■■■□□ 2.65
HMGA2-211ENST00000545998 ZFYVE16Q7Z3T8 1539 aa31.63■■■□□ 2.65
HMGA2-211ENST00000545998 ARHGEF5Q12774 1597 aa31.63■■■□□ 2.65
HMGA2-211ENST00000545998 MLH3Q9UHC1 1453 aa31.62■■■□□ 2.65
HMGA2-211ENST00000545998 YEATS2Q9ULM3 1422 aa31.61■■■□□ 2.65
HMGA2-211ENST00000545998 CCDC141Q6ZP82 1450 aa31.59■■■□□ 2.65
HMGA2-211ENST00000545998 KIDINS220Q9ULH0 1771 aa31.58■■■□□ 2.65
HMGA2-211ENST00000545998 RSPH4AQ5TD94 716 aa31.58■■■□□ 2.65
HMGA2-211ENST00000545998 SPAG9O60271 1321 aaKnown RBP31.56■■■□□ 2.64
HMGA2-211ENST00000545998 INO80Q9ULG1 1556 aaPredicted RBP31.55■■■□□ 2.64
HMGA2-211ENST00000545998 ATP7AQ04656 1500 aa31.53■■■□□ 2.64
HMGA2-211ENST00000545998 ABCA6Q8N139 1617 aa31.52■■■□□ 2.64
HMGA2-211ENST00000545998 MYT1LQ9UL68 1186 aa31.52■■■□□ 2.64
HMGA2-211ENST00000545998 DIP2CQ9Y2E4 1556 aa31.51■■■□□ 2.64
HMGA2-211ENST00000545998 ATP10AO60312 1499 aa31.5■■■□□ 2.63
HMGA2-211ENST00000545998 RTEL1-TNFRSF6BF6WH68 1400 aa31.49■■■□□ 2.63
HMGA2-211ENST00000545998 DNMT1P26358 1616 aaKnown RBP31.49■■■□□ 2.63
HMGA2-211ENST00000545998 CROCC2H7BZ55 1655 aa31.47■■■□□ 2.63
HMGA2-211ENST00000545998 FAM50AQ14320 339 aaKnown RBP31.47■■■□□ 2.63
HMGA2-211ENST00000545998 ABCC5O15440 1437 aa31.46■■■□□ 2.63
HMGA2-211ENST00000545998 MAST1Q9Y2H9 1570 aa31.46■■■□□ 2.63
HMGA2-211ENST00000545998 TSPY4P0CV99 314 aa31.45■■■□□ 2.63
HMGA2-211ENST00000545998 TSPY10P0CW01 314 aa31.45■■■□□ 2.63
HMGA2-211ENST00000545998 SIGLEC1Q9BZZ2 1709 aa31.44■■■□□ 2.62
HMGA2-211ENST00000545998 DAPK1P53355 1430 aa31.44■■■□□ 2.62
HMGA2-211ENST00000545998 C9orf84Q5VXU9 1444 aa31.44■■■□□ 2.62
HMGA2-211ENST00000545998 RRBP1Q9P2E9 1410 aaKnown RBP31.43■■■□□ 2.62
HMGA2-211ENST00000545998 REREQ9P2R6 1566 aa31.42■■■□□ 2.62
HMGA2-211ENST00000545998 SHANK2Q9UPX8 1470 aa31.41■■■□□ 2.62
HMGA2-211ENST00000545998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.41■■■□□ 2.62
HMGA2-211ENST00000545998 ADGBQ8N7X0 1667 aa31.38■■■□□ 2.61
HMGA2-211ENST00000545998 A2MP01023 1474 aa31.34■■■□□ 2.61
HMGA2-211ENST00000545998 PLXNC1O60486 1568 aa31.33■■■□□ 2.61
HMGA2-211ENST00000545998 ARID4BQ4LE39 1312 aaPredicted RBP31.33■■■□□ 2.61
HMGA2-211ENST00000545998 AGLP35573 1532 aa31.31■■■□□ 2.6
HMGA2-211ENST00000545998 BCORL1Q5H9F3 1711 aa31.31■■■□□ 2.6
HMGA2-211ENST00000545998 PTPRKQ15262 1439 aa31.28■■■□□ 2.6
HMGA2-211ENST00000545998 DHX29Q7Z478 1369 aaKnown RBP31.27■■■□□ 2.6
HMGA2-211ENST00000545998 CHIC2Q9UKJ5 165 aa31.26■■■□□ 2.6
HMGA2-211ENST00000545998 ADGRL2O95490 1459 aa31.26■■■□□ 2.59
HMGA2-211ENST00000545998 KDM4FA0A1W2PPD8 638 aa31.26■■■□□ 2.59
HMGA2-211ENST00000545998 ADAMTSL3P82987 1691 aa31.24■■■□□ 2.59
HMGA2-211ENST00000545998 NCOA1Q15788 1441 aa31.23■■■□□ 2.59
HMGA2-211ENST00000545998 ANKRD30AQ9BXX3 1397 aa31.22■■■□□ 2.59
HMGA2-211ENST00000545998 KIF15Q9NS87 1388 aa31.21■■■□□ 2.59
HMGA2-211ENST00000545998 DUOX2Q9NRD8 1548 aa31.2■■■□□ 2.59
HMGA2-211ENST00000545998 ITGAEP38570 1179 aa31.19■■■□□ 2.58
HMGA2-211ENST00000545998 RRP7BPQ9NSQ0 103 aa31.19■■■□□ 2.58
HMGA2-211ENST00000545998 MLECQ14165 292 aa31.17■■■□□ 2.58
HMGA2-211ENST00000545998 ROCK1Q13464 1354 aa31.15■■■□□ 2.58
HMGA2-211ENST00000545998 MADDQ8WXG6 1647 aa31.15■■■□□ 2.58
HMGA2-211ENST00000545998 EIF2AK4Q9P2K8 1649 aaKnown RBP31.14■■■□□ 2.57
HMGA2-211ENST00000545998 FER1L4A9Z1Z3 1794 aa31.12■■■□□ 2.57
HMGA2-211ENST00000545998 ERBINQ96RT1 1412 aa31.11■■■□□ 2.57
HMGA2-211ENST00000545998 KIF3BO15066 747 aa31.09■■■□□ 2.57
HMGA2-211ENST00000545998 RIMS1Q86UR5 1692 aaKnown RBP31.06■■■□□ 2.56
HMGA2-211ENST00000545998 RNF17Q9BXT8 1623 aaKnown RBP31.06■■■□□ 2.56
HMGA2-211ENST00000545998 GGT6Q6P531 493 aa31.05■■■□□ 2.56
HMGA2-211ENST00000545998 ANKRD50Q9ULJ7 1429 aa31.02■■■□□ 2.56
HMGA2-211ENST00000545998 PPP6R1Q9UPN7 881 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms