RNA–Protein interactions for RNA: ENST00000545484.1

CCND1-206, Transcript of cyclin D1, humanhuman

TSL 5

Gene CCND1, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-206ENST00000545484 CDC42BPBQ9Y5S2 1711 aa34.55■■■■□ 3.12
CCND1-206ENST00000545484 ZMYM4Q5VZL5 1548 aa34.55■■■■□ 3.12
CCND1-206ENST00000545484 SCAPERQ9BY12 1400 aa34.55■■■■□ 3.12
CCND1-206ENST00000545484 PREX2Q70Z35 1606 aa34.54■■■■□ 3.12
CCND1-206ENST00000545484 POGZQ7Z3K3 1410 aa34.52■■■■□ 3.12
CCND1-206ENST00000545484 CDC42BPAQ5VT25 1732 aa34.48■■■■□ 3.11
CCND1-206ENST00000545484 ZFYVE16Q7Z3T8 1539 aa34.46■■■■□ 3.11
CCND1-206ENST00000545484 MAGI2Q86UL8 1455 aa34.42■■■■□ 3.1
CCND1-206ENST00000545484 YEATS2Q9ULM3 1422 aa34.41■■■■□ 3.1
CCND1-206ENST00000545484 MTUS2Q5JR59 1369 aa34.4■■■■□ 3.1
CCND1-206ENST00000545484 ARID4BQ4LE39 1312 aaPredicted RBP34.4■■■■□ 3.1
CCND1-206ENST00000545484 ZNF518AQ6AHZ1 1483 aa34.39■■■■□ 3.1
CCND1-206ENST00000545484 BCORL1Q5H9F3 1711 aa34.38■■■■□ 3.09
CCND1-206ENST00000545484 ADAMTSL3P82987 1691 aa34.38■■■■□ 3.09
CCND1-206ENST00000545484 ABCC1P33527 1531 aa34.36■■■■□ 3.09
CCND1-206ENST00000545484 KDM5CP41229 1560 aa34.34■■■■□ 3.09
CCND1-206ENST00000545484 ITSN2Q9NZM3 1697 aa34.34■■■■□ 3.09
CCND1-206ENST00000545484 EHBP1L1Q8N3D4 1523 aa34.34■■■■□ 3.09
CCND1-206ENST00000545484 SIGLEC1Q9BZZ2 1709 aa34.33■■■■□ 3.09
CCND1-206ENST00000545484 GPATCH8Q9UKJ3 1502 aaKnown RBP34.31■■■■□ 3.08
CCND1-206ENST00000545484 VPS8Q8N3P4 1428 aa34.3■■■■□ 3.08
CCND1-206ENST00000545484 HECW2Q9P2P5 1572 aa34.29■■■■□ 3.08
CCND1-206ENST00000545484 AFAP1Q8N556 730 aa34.29■■■■□ 3.08
CCND1-206ENST00000545484 MADDQ8WXG6 1647 aa34.28■■■■□ 3.08
CCND1-206ENST00000545484 ARHGEF12Q9NZN5 1544 aa34.28■■■■□ 3.08
CCND1-206ENST00000545484 SAMD9LQ8IVG5 1584 aa34.28■■■■□ 3.08
CCND1-206ENST00000545484 CCNB3Q8WWL7 1395 aa34.27■■■■□ 3.08
CCND1-206ENST00000545484 ZNF777Q9ULD5 760 aaPredicted RBP34.25■■■■□ 3.07
CCND1-206ENST00000545484 TRAPPC8Q9Y2L5 1435 aa34.24■■■■□ 3.07
CCND1-206ENST00000545484 ATP10AO60312 1499 aa34.24■■■■□ 3.07
CCND1-206ENST00000545484 MYT1LQ9UL68 1186 aa34.23■■■■□ 3.07
CCND1-206ENST00000545484 TIAM1Q13009 1591 aa34.23■■■■□ 3.07
CCND1-206ENST00000545484 C9orf84Q5VXU9 1444 aa34.22■■■■□ 3.07
CCND1-206ENST00000545484 PTPRMP28827 1452 aa34.21■■■■□ 3.07
CCND1-206ENST00000545484 SYCP2Q9BX26 1530 aa34.2■■■■□ 3.07
CCND1-206ENST00000545484 RIMS1Q86UR5 1692 aaKnown RBP34.19■■■■□ 3.06
CCND1-206ENST00000545484 CFDP1Q9UEE9 299 aaPredicted RBP34.19■■■■□ 3.06
CCND1-206ENST00000545484 DIP2CQ9Y2E4 1556 aa34.19■■■■□ 3.06
CCND1-206ENST00000545484 SUPT6HQ7KZ85 1726 aaKnown RBP34.18■■■■□ 3.06
CCND1-206ENST00000545484 ABCA6Q8N139 1617 aa34.17■■■■□ 3.06
CCND1-206ENST00000545484 MLH3Q9UHC1 1453 aa34.17■■■■□ 3.06
CCND1-206ENST00000545484 PLEKHH2Q8IVE3 1493 aa34.13■■■■□ 3.05
CCND1-206ENST00000545484 KIDINS220Q9ULH0 1771 aa34.12■■■■□ 3.05
CCND1-206ENST00000545484 FER1L4A9Z1Z3 1794 aa34.11■■■■□ 3.05
CCND1-206ENST00000545484 MLECQ14165 292 aa34.11■■■■□ 3.05
CCND1-206ENST00000545484 NCOA2Q15596 1464 aa34.1■■■■□ 3.05
CCND1-206ENST00000545484 REREQ9P2R6 1566 aa34.09■■■■□ 3.05
CCND1-206ENST00000545484 KIAA1107Q9UPP5 1409 aa34.08■■■■□ 3.05
CCND1-206ENST00000545484 HNRNPMP52272 730 aaKnown RBP eCLIP34.08■■■■□ 3.05
CCND1-206ENST00000545484 LRRC9Q6ZRR7 1453 aa34.06■■■■□ 3.04
CCND1-206ENST00000545484 MAP3K1Q13233 1512 aa34.02■■■■□ 3.04
CCND1-206ENST00000545484 SPAG9O60271 1321 aaKnown RBP34.01■■■■□ 3.03
CCND1-206ENST00000545484 ZNF644Q9H582 1327 aaPredicted RBP34.01■■■■□ 3.03
CCND1-206ENST00000545484 ATP7AQ04656 1500 aa33.99■■■■□ 3.03
CCND1-206ENST00000545484 INO80Q9ULG1 1556 aaPredicted RBP33.99■■■■□ 3.03
CCND1-206ENST00000545484 PLPPR3Q6T4P5 718 aa33.96■■■■□ 3.03
CCND1-206ENST00000545484 AGLP35573 1532 aa33.95■■■■□ 3.03
CCND1-206ENST00000545484 CAMSAP2Q08AD1 1489 aa33.94■■■■□ 3.02
CCND1-206ENST00000545484 KANK4Q5T7N3 995 aaPredicted RBP33.93■■■■□ 3.02
CCND1-206ENST00000545484 MBD5Q9P267 1494 aa33.93■■■■□ 3.02
CCND1-206ENST00000545484 APLP2Q06481 763 aa33.86■■■■□ 3.01
CCND1-206ENST00000545484 ADGBQ8N7X0 1667 aa33.84■■■■□ 3.01
CCND1-206ENST00000545484 CCDC141Q6ZP82 1450 aa33.83■■■■□ 3.01
CCND1-206ENST00000545484 PLXNC1O60486 1568 aa33.83■■■■□ 3.01
CCND1-206ENST00000545484 A2MP01023 1474 aa33.82■■■■□ 3.01
CCND1-206ENST00000545484 LMTK3Q96Q04 1460 aa33.82■■■■□ 3.01
CCND1-206ENST00000545484 ARHGEF5Q12774 1597 aa33.78■■■■□ 3
CCND1-206ENST00000545484 RTEL1-TNFRSF6BF6WH68 1400 aa33.78■■■■□ 3
CCND1-206ENST00000545484 MYOM3Q5VTT5 1437 aa33.78■■■■□ 3
CCND1-206ENST00000545484 CEBPAP49715 358 aaPredicted RBP33.76■■■□□ 2.99
CCND1-206ENST00000545484 ESF1Q9H501 851 aaKnown RBP33.76■■■□□ 2.99
CCND1-206ENST00000545484 C3P01024 1663 aa33.75■■■□□ 2.99
CCND1-206ENST00000545484 RSPH4AQ5TD94 716 aa33.73■■■□□ 2.99
CCND1-206ENST00000545484 MIA2Q96PC5 1412 aa33.71■■■□□ 2.99
CCND1-206ENST00000545484 PREX1Q8TCU6 1659 aa33.71■■■□□ 2.99
CCND1-206ENST00000545484 CNTLNQ9NXG0 1405 aa33.7■■■□□ 2.98
CCND1-206ENST00000545484 MROH2AA6NES4 1674 aa33.67■■■□□ 2.98
CCND1-206ENST00000545484 CLTCQ00610 1675 aaKnown RBP33.64■■■□□ 2.98
CCND1-206ENST00000545484 TSPY4P0CV99 314 aa33.63■■■□□ 2.97
CCND1-206ENST00000545484 TSPY10P0CW01 314 aa33.63■■■□□ 2.97
CCND1-206ENST00000545484 HSPA2P54652 639 aa33.63■■■□□ 2.97
CCND1-206ENST00000545484 DHX29Q7Z478 1369 aaKnown RBP33.62■■■□□ 2.97
CCND1-206ENST00000545484 GGT6Q6P531 493 aa33.61■■■□□ 2.97
CCND1-206ENST00000545484 PTPN23Q9H3S7 1636 aa33.61■■■□□ 2.97
CCND1-206ENST00000545484 MAST1Q9Y2H9 1570 aa33.6■■■□□ 2.97
CCND1-206ENST00000545484 SETD1BQ9UPS6 1966 aaKnown RBP33.6■■■□□ 2.97
CCND1-206ENST00000545484 UHRF1BP1Q6BDS2 1440 aa33.56■■■□□ 2.96
CCND1-206ENST00000545484 CROCC2H7BZ55 1655 aa33.54■■■□□ 2.96
CCND1-206ENST00000545484 FGD6Q6ZV73 1430 aa33.53■■■□□ 2.96
CCND1-206ENST00000545484 ZMYM3Q14202 1370 aa33.53■■■□□ 2.96
CCND1-206ENST00000545484 KIF3BO15066 747 aa33.52■■■□□ 2.96
CCND1-206ENST00000545484 PPP6R1Q9UPN7 881 aa33.48■■■□□ 2.95
CCND1-206ENST00000545484 NPATQ14207 1427 aa33.47■■■□□ 2.95
CCND1-206ENST00000545484 TCOF1Q13428 1488 aaKnown RBP33.47■■■□□ 2.95
CCND1-206ENST00000545484 DNMT1P26358 1616 aaKnown RBP33.46■■■□□ 2.95
CCND1-206ENST00000545484 SHANK2Q9UPX8 1470 aa33.44■■■□□ 2.94
CCND1-206ENST00000545484 ABCC5O15440 1437 aa33.44■■■□□ 2.94
CCND1-206ENST00000545484 KDM5DQ9BY66 1539 aa33.43■■■□□ 2.94
CCND1-206ENST00000545484 DAPK1P53355 1430 aa33.42■■■□□ 2.94
CCND1-206ENST00000545484 EIF2AK4Q9P2K8 1649 aaKnown RBP33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms