RNA–Protein interactions for RNA: ENST00000545466.1

C1R-213, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-213ENST00000545466 ADAMTSL3P82987 1691 aa12.48□□□□□ -0.41
C1R-213ENST00000545466 ZMYM4Q5VZL5 1548 aa12.47□□□□□ -0.41
C1R-213ENST00000545466 DENND4BO75064 1496 aaPredicted RBP12.47□□□□□ -0.41
C1R-213ENST00000545466 PREX2Q70Z35 1606 aa12.47□□□□□ -0.41
C1R-213ENST00000545466 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
C1R-213ENST00000545466 YEATS2Q9ULM3 1422 aa12.46□□□□□ -0.41
C1R-213ENST00000545466 ARHGEF12Q9NZN5 1544 aa12.46□□□□□ -0.42
C1R-213ENST00000545466 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
C1R-213ENST00000545466 ARHGEF40Q8TER5 1519 aa12.45□□□□□ -0.42
C1R-213ENST00000545466 BCORL1Q5H9F3 1711 aa12.45□□□□□ -0.42
C1R-213ENST00000545466 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
C1R-213ENST00000545466 POGZQ7Z3K3 1410 aa12.43□□□□□ -0.42
C1R-213ENST00000545466 ARHGAP5Q13017 1502 aa12.42□□□□□ -0.42
C1R-213ENST00000545466 KDM5CP41229 1560 aa12.42□□□□□ -0.42
C1R-213ENST00000545466 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
C1R-213ENST00000545466 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
C1R-213ENST00000545466 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
C1R-213ENST00000545466 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
C1R-213ENST00000545466 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
C1R-213ENST00000545466 TRAPPC8Q9Y2L5 1435 aa12.4□□□□□ -0.42
C1R-213ENST00000545466 ABCC1P33527 1531 aa12.4□□□□□ -0.42
C1R-213ENST00000545466 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
C1R-213ENST00000545466 AFAP1Q8N556 730 aa12.39□□□□□ -0.43
C1R-213ENST00000545466 KIDINS220Q9ULH0 1771 aa12.38□□□□□ -0.43
C1R-213ENST00000545466 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
C1R-213ENST00000545466 MAGI2Q86UL8 1455 aa12.37□□□□□ -0.43
C1R-213ENST00000545466 RIMS1Q86UR5 1692 aaKnown RBP12.36□□□□□ -0.43
C1R-213ENST00000545466 TIAM1Q13009 1591 aa12.36□□□□□ -0.43
C1R-213ENST00000545466 DIP2CQ9Y2E4 1556 aa12.36□□□□□ -0.43
C1R-213ENST00000545466 PTPRMP28827 1452 aa12.36□□□□□ -0.43
C1R-213ENST00000545466 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
C1R-213ENST00000545466 ZNF518AQ6AHZ1 1483 aa12.34□□□□□ -0.43
C1R-213ENST00000545466 ATP10AO60312 1499 aa12.34□□□□□ -0.43
C1R-213ENST00000545466 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.44
C1R-213ENST00000545466 SYCP2Q9BX26 1530 aa12.33□□□□□ -0.44
C1R-213ENST00000545466 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
C1R-213ENST00000545466 ZNF644Q9H582 1327 aaPredicted RBP12.33□□□□□ -0.44
C1R-213ENST00000545466 MLH3Q9UHC1 1453 aa12.33□□□□□ -0.44
C1R-213ENST00000545466 FER1L4A9Z1Z3 1794 aa12.32□□□□□ -0.44
C1R-213ENST00000545466 MTUS2Q5JR59 1369 aa12.31□□□□□ -0.44
C1R-213ENST00000545466 REREQ9P2R6 1566 aa12.3□□□□□ -0.44
C1R-213ENST00000545466 C9orf84Q5VXU9 1444 aa12.3□□□□□ -0.44
C1R-213ENST00000545466 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.44
C1R-213ENST00000545466 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
C1R-213ENST00000545466 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
C1R-213ENST00000545466 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
C1R-213ENST00000545466 MBD5Q9P267 1494 aa12.29□□□□□ -0.44
C1R-213ENST00000545466 ZNF777Q9ULD5 760 aaPredicted RBP12.29□□□□□ -0.44
C1R-213ENST00000545466 INO80Q9ULG1 1556 aaPredicted RBP12.29□□□□□ -0.44
C1R-213ENST00000545466 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
C1R-213ENST00000545466 CCNB3Q8WWL7 1395 aa12.28□□□□□ -0.44
C1R-213ENST00000545466 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.44
C1R-213ENST00000545466 MLECQ14165 292 aa12.27□□□□□ -0.45
C1R-213ENST00000545466 KIAA1107Q9UPP5 1409 aa12.27□□□□□ -0.45
C1R-213ENST00000545466 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
C1R-213ENST00000545466 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
C1R-213ENST00000545466 AGLP35573 1532 aa12.25□□□□□ -0.45
C1R-213ENST00000545466 ATP7AQ04656 1500 aa12.25□□□□□ -0.45
C1R-213ENST00000545466 MAP3K1Q13233 1512 aa12.25□□□□□ -0.45
C1R-213ENST00000545466 ADGBQ8N7X0 1667 aa12.23□□□□□ -0.45
C1R-213ENST00000545466 PLXNC1O60486 1568 aa12.23□□□□□ -0.45
C1R-213ENST00000545466 CEBPAP49715 358 aaPredicted RBP12.23□□□□□ -0.45
C1R-213ENST00000545466 C3P01024 1663 aa12.22□□□□□ -0.45
C1R-213ENST00000545466 CAMSAP2Q08AD1 1489 aa12.22□□□□□ -0.45
C1R-213ENST00000545466 PLEKHH2Q8IVE3 1493 aa12.21□□□□□ -0.45
C1R-213ENST00000545466 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
C1R-213ENST00000545466 SETD1BQ9UPS6 1966 aaKnown RBP12.2□□□□□ -0.46
C1R-213ENST00000545466 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
C1R-213ENST00000545466 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
C1R-213ENST00000545466 ARHGEF5Q12774 1597 aa12.18□□□□□ -0.46
C1R-213ENST00000545466 A2MP01023 1474 aa12.17□□□□□ -0.46
C1R-213ENST00000545466 HSPA2P54652 639 aa12.17□□□□□ -0.46
C1R-213ENST00000545466 CLTCQ00610 1675 aaKnown RBP12.16□□□□□ -0.46
C1R-213ENST00000545466 RTEL1-TNFRSF6BF6WH68 1400 aa12.16□□□□□ -0.46
C1R-213ENST00000545466 PREX1Q8TCU6 1659 aa12.16□□□□□ -0.46
C1R-213ENST00000545466 STRCQ7RTU9 1775 aa12.15□□□□□ -0.46
C1R-213ENST00000545466 CCDC141Q6ZP82 1450 aa12.15□□□□□ -0.46
C1R-213ENST00000545466 MYOM3Q5VTT5 1437 aa12.15□□□□□ -0.46
C1R-213ENST00000545466 MROH2AA6NES4 1674 aa12.15□□□□□ -0.46
C1R-213ENST00000545466 MAST1Q9Y2H9 1570 aa12.13□□□□□ -0.47
C1R-213ENST00000545466 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
C1R-213ENST00000545466 CROCC2H7BZ55 1655 aa12.12□□□□□ -0.47
C1R-213ENST00000545466 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
C1R-213ENST00000545466 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
C1R-213ENST00000545466 ZMYM3Q14202 1370 aa12.09□□□□□ -0.47
C1R-213ENST00000545466 MROH1Q8NDA8 1641 aa12.09□□□□□ -0.47
C1R-213ENST00000545466 TCOF1Q13428 1488 aaKnown RBP12.08□□□□□ -0.47
C1R-213ENST00000545466 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
C1R-213ENST00000545466 GGT6Q6P531 493 aa12.08□□□□□ -0.48
C1R-213ENST00000545466 ABCC5O15440 1437 aa12.08□□□□□ -0.48
C1R-213ENST00000545466 DNMT1P26358 1616 aaKnown RBP12.08□□□□□ -0.48
C1R-213ENST00000545466 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
C1R-213ENST00000545466 FGD6Q6ZV73 1430 aa12.07□□□□□ -0.48
C1R-213ENST00000545466 CNTLNQ9NXG0 1405 aa12.07□□□□□ -0.48
C1R-213ENST00000545466 CFAP65Q6ZU64 1925 aaKnown RBP12.07□□□□□ -0.48
C1R-213ENST00000545466 RNF17Q9BXT8 1623 aaKnown RBP12.06□□□□□ -0.48
C1R-213ENST00000545466 KIF3BO15066 747 aa12.05□□□□□ -0.48
C1R-213ENST00000545466 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
C1R-213ENST00000545466 CEP152O94986 1710 aa12.04□□□□□ -0.48
C1R-213ENST00000545466 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms