RNA–Protein interactions for RNA: ENST00000545028.2

KLHL1-202, Transcript of kelch like family member 1, humanhuman

TSL 2 BASIC

Gene KLHL1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1-202ENST00000545028 MAPKBP1O60336 1514 aa13.34□□□□□ -0.27
KLHL1-202ENST00000545028 ARID4BQ4LE39 1312 aaPredicted RBP13.34□□□□□ -0.27
KLHL1-202ENST00000545028 CLSPNQ9HAW4 1339 aa13.34□□□□□ -0.27
KLHL1-202ENST00000545028 CD109Q6YHK3 1445 aa13.33□□□□□ -0.27
KLHL1-202ENST00000545028 RAPGEF3O95398 923 aa13.32□□□□□ -0.28
KLHL1-202ENST00000545028 ABCA8O94911 1581 aa13.32□□□□□ -0.28
KLHL1-202ENST00000545028 WDR7Q9Y4E6 1490 aa13.31□□□□□ -0.28
KLHL1-202ENST00000545028 ADCY10Q96PN6 1610 aa13.31□□□□□ -0.28
KLHL1-202ENST00000545028 RRP7BPQ9NSQ0 103 aa13.3□□□□□ -0.28
KLHL1-202ENST00000545028 AFAP1Q8N556 730 aa13.3□□□□□ -0.28
KLHL1-202ENST00000545028 KIF14Q15058 1648 aa13.3□□□□□ -0.28
KLHL1-202ENST00000545028 MLECQ14165 292 aa13.3□□□□□ -0.28
KLHL1-202ENST00000545028 TCOF1Q13428 1488 aaKnown RBP13.3□□□□□ -0.28
KLHL1-202ENST00000545028 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
KLHL1-202ENST00000545028 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
KLHL1-202ENST00000545028 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
KLHL1-202ENST00000545028 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
KLHL1-202ENST00000545028 HFM1A2PYH4 1435 aa13.28□□□□□ -0.28
KLHL1-202ENST00000545028 NAIPQ13075 1403 aa13.28□□□□□ -0.28
KLHL1-202ENST00000545028 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
KLHL1-202ENST00000545028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
KLHL1-202ENST00000545028 TRIM52Q96A61 297 aa13.27□□□□□ -0.28
KLHL1-202ENST00000545028 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
KLHL1-202ENST00000545028 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
KLHL1-202ENST00000545028 ARHGAP5Q13017 1502 aa13.26□□□□□ -0.29
KLHL1-202ENST00000545028 ZCCHC11Q5TAX3 1644 aaKnown RBP13.25□□□□□ -0.29
KLHL1-202ENST00000545028 ESF1Q9H501 851 aaKnown RBP13.24□□□□□ -0.29
KLHL1-202ENST00000545028 KDM6BO15054 1643 aa13.24□□□□□ -0.29
KLHL1-202ENST00000545028 SPAG9O60271 1321 aaKnown RBP13.23□□□□□ -0.29
KLHL1-202ENST00000545028 GPATCH8Q9UKJ3 1502 aaKnown RBP13.23□□□□□ -0.29
KLHL1-202ENST00000545028 DAPK1P53355 1430 aa13.21□□□□□ -0.29
KLHL1-202ENST00000545028 ABCC5O15440 1437 aa13.21□□□□□ -0.29
KLHL1-202ENST00000545028 SCAPERQ9BY12 1400 aa13.21□□□□□ -0.29
KLHL1-202ENST00000545028 TSPOAP1O95153 1857 aa13.21□□□□□ -0.29
KLHL1-202ENST00000545028 GGT6Q6P531 493 aa13.2□□□□□ -0.3
KLHL1-202ENST00000545028 CAMSAP2Q08AD1 1489 aa13.19□□□□□ -0.3
KLHL1-202ENST00000545028 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
KLHL1-202ENST00000545028 DNMT1P26358 1616 aaKnown RBP13.19□□□□□ -0.3
KLHL1-202ENST00000545028 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
KLHL1-202ENST00000545028 GCC2Q8IWJ2 1684 aa13.19□□□□□ -0.3
KLHL1-202ENST00000545028 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
KLHL1-202ENST00000545028 FANCAO15360 1455 aa13.19□□□□□ -0.3
KLHL1-202ENST00000545028 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
KLHL1-202ENST00000545028 PLCH2O75038 1416 aa13.16□□□□□ -0.3
KLHL1-202ENST00000545028 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
KLHL1-202ENST00000545028 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
KLHL1-202ENST00000545028 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
KLHL1-202ENST00000545028 KIF3BO15066 747 aa13.15□□□□□ -0.3
KLHL1-202ENST00000545028 RSPH4AQ5TD94 716 aa13.14□□□□□ -0.31
KLHL1-202ENST00000545028 FOXD1Q16676 465 aa13.13□□□□□ -0.31
KLHL1-202ENST00000545028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.13□□□□□ -0.31
KLHL1-202ENST00000545028 TEX14Q8IWB6 1497 aa13.12□□□□□ -0.31
KLHL1-202ENST00000545028 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
KLHL1-202ENST00000545028 ROCK1Q13464 1354 aa13.11□□□□□ -0.31
KLHL1-202ENST00000545028 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
KLHL1-202ENST00000545028 NCOA1Q15788 1441 aa13.1□□□□□ -0.31
KLHL1-202ENST00000545028 TTC37Q6PGP7 1564 aa13.09□□□□□ -0.31
KLHL1-202ENST00000545028 MPHOSPH9Q99550 1183 aa13.09□□□□□ -0.31
KLHL1-202ENST00000545028 CROCC2H7BZ55 1655 aa13.09□□□□□ -0.31
KLHL1-202ENST00000545028 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
KLHL1-202ENST00000545028 MIER1Q8N108 512 aa13.07□□□□□ -0.32
KLHL1-202ENST00000545028 TRAPPC8Q9Y2L5 1435 aa13.07□□□□□ -0.32
KLHL1-202ENST00000545028 PPP1R15AO75807 674 aaPredicted RBP13.07□□□□□ -0.32
KLHL1-202ENST00000545028 ADGBQ8N7X0 1667 aa13.06□□□□□ -0.32
KLHL1-202ENST00000545028 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
KLHL1-202ENST00000545028 TONSLQ96HA7 1378 aa13.06□□□□□ -0.32
KLHL1-202ENST00000545028 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
KLHL1-202ENST00000545028 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
KLHL1-202ENST00000545028 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
KLHL1-202ENST00000545028 DIP2BQ9P265 1576 aa13.05□□□□□ -0.32
KLHL1-202ENST00000545028 SENP3Q9H4L4 574 aaPredicted RBP13.05□□□□□ -0.32
KLHL1-202ENST00000545028 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
KLHL1-202ENST00000545028 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
KLHL1-202ENST00000545028 C9orf84Q5VXU9 1444 aa13.04□□□□□ -0.32
KLHL1-202ENST00000545028 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
KLHL1-202ENST00000545028 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
KLHL1-202ENST00000545028 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
KLHL1-202ENST00000545028 TIMELESSQ9UNS1 1208 aa13.03□□□□□ -0.32
KLHL1-202ENST00000545028 WASHC2CQ9Y4E1 1318 aa13.03□□□□□ -0.32
KLHL1-202ENST00000545028 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
KLHL1-202ENST00000545028 KIF15Q9NS87 1388 aa13.02□□□□□ -0.32
KLHL1-202ENST00000545028 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
KLHL1-202ENST00000545028 ANKRD50Q9ULJ7 1429 aa13.01□□□□□ -0.33
KLHL1-202ENST00000545028 MYO5CQ9NQX4 1742 aa13.01□□□□□ -0.33
KLHL1-202ENST00000545028 PZPP20742 1482 aa13□□□□□ -0.33
KLHL1-202ENST00000545028 NEO1Q92859 1461 aa13□□□□□ -0.33
KLHL1-202ENST00000545028 CCDC141Q6ZP82 1450 aa12.99□□□□□ -0.33
KLHL1-202ENST00000545028 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
KLHL1-202ENST00000545028 ANKRD30BQ9BXX2 1392 aa12.99□□□□□ -0.33
KLHL1-202ENST00000545028 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
KLHL1-202ENST00000545028 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
KLHL1-202ENST00000545028 NUP155O75694 1391 aa12.98□□□□□ -0.33
KLHL1-202ENST00000545028 ZNF518AQ6AHZ1 1483 aa12.98□□□□□ -0.33
KLHL1-202ENST00000545028 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
KLHL1-202ENST00000545028 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
KLHL1-202ENST00000545028 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.33
KLHL1-202ENST00000545028 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
KLHL1-202ENST00000545028 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
KLHL1-202ENST00000545028 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.33
KLHL1-202ENST00000545028 L3MBTL2Q969R5 705 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms