RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	HAP1	P54257	671 aa	Predicted RBP	10.69	□□□□□ -0.7
RAP1B-231	ENST00000544639	GTPBP6	O43824	516 aa	Predicted RBP	10.66	□□□□□ -0.7
RAP1B-231	ENST00000544639	MICALL2	Q8IY33	904 aa		10.62	□□□□□ -0.71
RAP1B-231	ENST00000544639	MS4A4A	Q96JQ5	239 aa		10.62	□□□□□ -0.71
RAP1B-231	ENST00000544639	PHF8	Q9UPP1	1060 aa		10.62	□□□□□ -0.71
RAP1B-231	ENST00000544639	MARVELD3	Q96A59	401 aa		10.61	□□□□□ -0.71
RAP1B-231	ENST00000544639	RYDEN	Q9NUL5	291 aa	Known RBP	10.61	□□□□□ -0.71
RAP1B-231	ENST00000544639	NLRP6	P59044	892 aa		10.6	□□□□□ -0.71
RAP1B-231	ENST00000544639	HOXB3	P14651	431 aa	Predicted RBP	10.59	□□□□□ -0.71
RAP1B-231	ENST00000544639	MFRP	Q9BY79	579 aa		10.59	□□□□□ -0.71
RAP1B-231	ENST00000544639	TSHZ2	Q9NRE2	1034 aa		10.58	□□□□□ -0.72
RAP1B-231	ENST00000544639	EMP3	P54852	163 aa		10.57	□□□□□ -0.72
RAP1B-231	ENST00000544639	DOK7	Q18PE1	504 aa		10.57	□□□□□ -0.72
RAP1B-231	ENST00000544639	FBXO22	Q8NEZ5	403 aa		10.56	□□□□□ -0.72
RAP1B-231	ENST00000544639	VSIG10	Q8N0Z9	540 aa		10.54	□□□□□ -0.72
RAP1B-231	ENST00000544639	TMEM92	Q6UXU6	159 aa		10.53	□□□□□ -0.72
RAP1B-231	ENST00000544639	ZNF710	Q8N1W2	664 aa		10.53	□□□□□ -0.72
RAP1B-231	ENST00000544639	HOXB1	P14653	301 aa	Predicted RBP	10.52	□□□□□ -0.73
RAP1B-231	ENST00000544639	RIMBP2	O15034	1052 aa		10.51	□□□□□ -0.73
RAP1B-231	ENST00000544639	HS3ST6	Q96QI5	342 aa		10.51	□□□□□ -0.73
RAP1B-231	ENST00000544639	FAM205C	A6NFA0	338 aa		10.49	□□□□□ -0.73
RAP1B-231	ENST00000544639	ZSWIM6	Q9HCJ5	1215 aa		10.49	□□□□□ -0.73
RAP1B-231	ENST00000544639	KDM2A	Q9Y2K7	1162 aa		10.49	□□□□□ -0.73
RAP1B-231	ENST00000544639	POTEB3	A0JP26	581 aa		10.47	□□□□□ -0.73
RAP1B-231	ENST00000544639	POTEB	Q6S5H4	581 aa		10.47	□□□□□ -0.73
RAP1B-231	ENST00000544639	PPP1R37	O75864	691 aa		10.45	□□□□□ -0.74
RAP1B-231	ENST00000544639	SPNS2	Q8IVW8	549 aa		10.45	□□□□□ -0.74
RAP1B-231	ENST00000544639	KRTAP3-3	Q9BYR6	98 aa		10.42	□□□□□ -0.74
RAP1B-231	ENST00000544639	KRTAP3-2	Q9BYR7	98 aa		10.42	□□□□□ -0.74
RAP1B-231	ENST00000544639	ERBB3	P21860	1342 aa		10.41	□□□□□ -0.74
RAP1B-231	ENST00000544639	KIF3C	O14782	793 aa		10.4	□□□□□ -0.74
RAP1B-231	ENST00000544639	MMRN1	Q13201	1228 aa		10.4	□□□□□ -0.74
RAP1B-231	ENST00000544639	GPR153	Q6NV75	609 aa		10.4	□□□□□ -0.74
RAP1B-231	ENST00000544639	CADPS2	Q86UW7	1296 aa		10.38	□□□□□ -0.75
RAP1B-231	ENST00000544639	C2orf72	A6NCS6	295 aa		10.35	□□□□□ -0.75
RAP1B-231	ENST00000544639	VARS2	Q5ST30	1063 aa	Known RBP	10.34	□□□□□ -0.75
RAP1B-231	ENST00000544639	SLC34A2	O95436	690 aa		10.31	□□□□□ -0.76
RAP1B-231	ENST00000544639	ARSI	Q5FYB1	569 aa		10.31	□□□□□ -0.76
RAP1B-231	ENST00000544639	ZNF687	Q8N1G0	1237 aa		10.31	□□□□□ -0.76
RAP1B-231	ENST00000544639	TMC2	Q8TDI7	906 aa		10.31	□□□□□ -0.76
RAP1B-231	ENST00000544639	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.26	□□□□□ -0.77
RAP1B-231	ENST00000544639	NCKAP5L	Q9HCH0	1330 aa		10.25	□□□□□ -0.77
RAP1B-231	ENST00000544639	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.24	□□□□□ -0.77	4e-7	■■□□□ 12.5
RAP1B-231	ENST00000544639	CRISPLD2	Q9H0B8	497 aa		10.24	□□□□□ -0.77
RAP1B-231	ENST00000544639	PCDHGA4	Q9Y5G9	962 aa		10.23	□□□□□ -0.77
RAP1B-231	ENST00000544639	WDR70	Q9NW82	654 aa		10.22	□□□□□ -0.77
RAP1B-231	ENST00000544639	FOXK1	P85037	733 aa		10.21	□□□□□ -0.77
RAP1B-231	ENST00000544639	BCAN	Q96GW7	911 aa		10.21	□□□□□ -0.77
RAP1B-231	ENST00000544639	NUDT7	P0C024	238 aa		10.2	□□□□□ -0.78
RAP1B-231	ENST00000544639	PDE4A	P27815	886 aa		10.2	□□□□□ -0.78
RAP1B-231	ENST00000544639	GPHN	Q9NQX3	736 aa	Predicted RBP	10.2	□□□□□ -0.78
RAP1B-231	ENST00000544639	MFSD10	Q14728	455 aa		10.19	□□□□□ -0.78
RAP1B-231	ENST00000544639	PTGER2	P43116	358 aa		10.18	□□□□□ -0.78
RAP1B-231	ENST00000544639	PTCD2	Q8WV60	388 aa	Known RBP	10.18	□□□□□ -0.78
RAP1B-231	ENST00000544639	LARP6	Q9BRS8	491 aa	Known RBP	10.18	□□□□□ -0.78
RAP1B-231	ENST00000544639	P3H3	Q8IVL6	736 aa		10.17	□□□□□ -0.78
RAP1B-231	ENST00000544639	PBX2	P40425	430 aa		10.16	□□□□□ -0.78
RAP1B-231	ENST00000544639	LHX6	Q9UPM6	363 aa		10.16	□□□□□ -0.78
RAP1B-231	ENST00000544639	PLPP6	Q8IY26	295 aa		10.15	□□□□□ -0.78
RAP1B-231	ENST00000544639	KCNV2	Q8TDN2	545 aa		10.15	□□□□□ -0.78
RAP1B-231	ENST00000544639	DDX27	Q96GQ7	796 aa	Known RBP	10.15	□□□□□ -0.78
RAP1B-231	ENST00000544639	PSD	A5PKW4	1024 aa	Predicted RBP	10.14	□□□□□ -0.79
RAP1B-231	ENST00000544639	KDM4F	A0A1W2PPD8	638 aa		10.13	□□□□□ -0.79
RAP1B-231	ENST00000544639	RNF166	Q96A37	237 aa	Predicted RBP	10.13	□□□□□ -0.79
RAP1B-231	ENST00000544639	LSM11	P83369	360 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
RAP1B-231	ENST00000544639	DSG2	Q14126	1118 aa		10.12	□□□□□ -0.79
RAP1B-231	ENST00000544639	E2F4	Q16254	413 aa		10.12	□□□□□ -0.79
RAP1B-231	ENST00000544639	MYT1L	Q9UL68	1186 aa		10.12	□□□□□ -0.79
RAP1B-231	ENST00000544639	NBR1	Q14596	966 aa		10.11	□□□□□ -0.79
RAP1B-231	ENST00000544639	PPP1R15B	Q5SWA1	713 aa		10.11	□□□□□ -0.79
RAP1B-231	ENST00000544639	TBC1D12	O60347	775 aa		10.1	□□□□□ -0.79
RAP1B-231	ENST00000544639	CAMK2B	Q13554	666 aa		10.09	□□□□□ -0.79
RAP1B-231	ENST00000544639	ANKRD13D	Q6ZTN6	518 aa		10.09	□□□□□ -0.79
RAP1B-231	ENST00000544639	POTEE	Q6S8J3	1075 aa		10.07	□□□□□ -0.8
RAP1B-231	ENST00000544639	ARHGEF1	Q92888	912 aa	Known RBP	10.06	□□□□□ -0.8
RAP1B-231	ENST00000544639	ARHGAP33	O14559	1287 aa		10.04	□□□□□ -0.8
RAP1B-231	ENST00000544639	OXER1	Q8TDS5	423 aa		10.04	□□□□□ -0.8
RAP1B-231	ENST00000544639	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.03	□□□□□ -0.8
RAP1B-231	ENST00000544639	AXIN2	Q9Y2T1	843 aa		10.02	□□□□□ -0.81
RAP1B-231	ENST00000544639	PPP4R3B	Q5MIZ7	849 aa		10.01	□□□□□ -0.81
RAP1B-231	ENST00000544639	EMILIN3	Q9NT22	766 aa		10	□□□□□ -0.81
RAP1B-231	ENST00000544639	TK2	O00142	265 aa		9.98	□□□□□ -0.81
RAP1B-231	ENST00000544639	ADGRD1	Q6QNK2	874 aa		9.97	□□□□□ -0.81
RAP1B-231	ENST00000544639	UPF1	Q92900	1129 aa	Known RBP eCLIP	9.95	□□□□□ -0.82
RAP1B-231	ENST00000544639	DPYSL4	O14531	572 aa		9.94	□□□□□ -0.82
RAP1B-231	ENST00000544639	PSEN2	P49810	448 aa		9.93	□□□□□ -0.82
RAP1B-231	ENST00000544639	KCNH8	Q96L42	1107 aa		9.93	□□□□□ -0.82
RAP1B-231	ENST00000544639	ANO8	Q9HCE9	1232 aa	Predicted RBP	9.93	□□□□□ -0.82
RAP1B-231	ENST00000544639	SEMA3E	O15041	775 aa		9.92	□□□□□ -0.82
RAP1B-231	ENST00000544639	DMRTA1	Q5VZB9	504 aa		9.92	□□□□□ -0.82
RAP1B-231	ENST00000544639	TESPA1	A2RU30	521 aa	Predicted RBP	9.91	□□□□□ -0.82
RAP1B-231	ENST00000544639	HR	O43593	1189 aa		9.91	□□□□□ -0.82
RAP1B-231	ENST00000544639	PDIA6	Q15084	440 aa		9.9	□□□□□ -0.82
RAP1B-231	ENST00000544639	ZNF454	Q8N9F8	522 aa		9.9	□□□□□ -0.82
RAP1B-231	ENST00000544639	BCL2L12	Q9HB09	334 aa		9.9	□□□□□ -0.82
RAP1B-231	ENST00000544639	SPDYE16	A6NNV3	312 aa	Predicted RBP	9.89	□□□□□ -0.83
RAP1B-231	ENST00000544639	FOSB	P53539	338 aa		9.89	□□□□□ -0.83
RAP1B-231	ENST00000544639	EVI5	O60447	810 aa		9.88	□□□□□ -0.83
RAP1B-231	ENST00000544639	JPH4	Q96JJ6	628 aa		9.88	□□□□□ -0.83
RAP1B-231	ENST00000544639	KCNK17	Q96T54	332 aa		9.88	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms