RNA–Protein interactions for RNA: ENST00000544537.2

PRTN3-202, Transcript of proteinase 3, humanhuman

TSL 1 (best) BASIC

Gene PRTN3, Length 1,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRTN3-202ENST00000544537 ARHGAP5Q13017 1502 aa28.94■■■□□ 2.22
PRTN3-202ENST00000544537 ITSN2Q9NZM3 1697 aa28.93■■■□□ 2.22
PRTN3-202ENST00000544537 CCNB3Q8WWL7 1395 aa28.91■■■□□ 2.22
PRTN3-202ENST00000544537 GPATCH8Q9UKJ3 1502 aaKnown RBP28.91■■■□□ 2.22
PRTN3-202ENST00000544537 PHLDB1Q86UU1 1377 aa28.9■■■□□ 2.22
PRTN3-202ENST00000544537 AKNAQ7Z591 1439 aa28.87■■■□□ 2.21
PRTN3-202ENST00000544537 EFCAB2Q5VUJ9 269 aa28.86■■■□□ 2.21
PRTN3-202ENST00000544537 COL17A1Q9UMD9 1497 aaPredicted RBP28.85■■■□□ 2.21
PRTN3-202ENST00000544537 ADGRL1O94910 1474 aa28.82■■■□□ 2.2
PRTN3-202ENST00000544537 SAMD9LQ8IVG5 1584 aa28.79■■■□□ 2.2
PRTN3-202ENST00000544537 CFDP1Q9UEE9 299 aaPredicted RBP28.78■■■□□ 2.2
PRTN3-202ENST00000544537 ABCC1P33527 1531 aa28.78■■■□□ 2.2
PRTN3-202ENST00000544537 RICTORQ6R327 1708 aa28.77■■■□□ 2.2
PRTN3-202ENST00000544537 DENND4BO75064 1496 aaPredicted RBP28.76■■■□□ 2.19
PRTN3-202ENST00000544537 FRMPD1Q5SYB0 1578 aa28.75■■■□□ 2.19
PRTN3-202ENST00000544537 MYOM3Q5VTT5 1437 aa28.75■■■□□ 2.19
PRTN3-202ENST00000544537 SCAPERQ9BY12 1400 aa28.75■■■□□ 2.19
PRTN3-202ENST00000544537 ZNF777Q9ULD5 760 aaPredicted RBP28.74■■■□□ 2.19
PRTN3-202ENST00000544537 PLEKHH2Q8IVE3 1493 aa28.71■■■□□ 2.19
PRTN3-202ENST00000544537 POGZQ7Z3K3 1410 aa28.7■■■□□ 2.19
PRTN3-202ENST00000544537 SYCP2Q9BX26 1530 aa28.69■■■□□ 2.18
PRTN3-202ENST00000544537 RAPGEF3O95398 923 aa28.68■■■□□ 2.18
PRTN3-202ENST00000544537 ARHGEF12Q9NZN5 1544 aa28.68■■■□□ 2.18
PRTN3-202ENST00000544537 CAMSAP2Q08AD1 1489 aa28.67■■■□□ 2.18
PRTN3-202ENST00000544537 MIA2Q96PC5 1412 aa28.67■■■□□ 2.18
PRTN3-202ENST00000544537 PPARGC1BQ86YN6 1023 aaKnown RBP28.66■■■□□ 2.18
PRTN3-202ENST00000544537 ZMYM4Q5VZL5 1548 aa28.65■■■□□ 2.18
PRTN3-202ENST00000544537 KIAA1107Q9UPP5 1409 aa28.65■■■□□ 2.18
PRTN3-202ENST00000544537 ZNF518AQ6AHZ1 1483 aa28.65■■■□□ 2.18
PRTN3-202ENST00000544537 ZNF644Q9H582 1327 aaPredicted RBP28.64■■■□□ 2.17
PRTN3-202ENST00000544537 KDM5CP41229 1560 aa28.62■■■□□ 2.17
PRTN3-202ENST00000544537 FGD6Q6ZV73 1430 aa28.61■■■□□ 2.17
PRTN3-202ENST00000544537 TRAPPC8Q9Y2L5 1435 aa28.61■■■□□ 2.17
PRTN3-202ENST00000544537 PTPN23Q9H3S7 1636 aa28.61■■■□□ 2.17
PRTN3-202ENST00000544537 HNRNPMP52272 730 aaKnown RBP eCLIP28.57■■■□□ 2.16
PRTN3-202ENST00000544537 HECW2Q9P2P5 1572 aa28.57■■■□□ 2.16
PRTN3-202ENST00000544537 MBD5Q9P267 1494 aa28.56■■■□□ 2.16
PRTN3-202ENST00000544537 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
PRTN3-202ENST00000544537 ARHGEF5Q12774 1597 aa28.54■■■□□ 2.16
PRTN3-202ENST00000544537 ARHGEF40Q8TER5 1519 aa28.54■■■□□ 2.16
PRTN3-202ENST00000544537 TCOF1Q13428 1488 aaKnown RBP28.54■■■□□ 2.16
PRTN3-202ENST00000544537 MAGI2Q86UL8 1455 aa28.54■■■□□ 2.16
PRTN3-202ENST00000544537 ZFYVE16Q7Z3T8 1539 aa28.53■■■□□ 2.16
PRTN3-202ENST00000544537 CCDC141Q6ZP82 1450 aa28.52■■■□□ 2.16
PRTN3-202ENST00000544537 MLH3Q9UHC1 1453 aa28.49■■■□□ 2.15
PRTN3-202ENST00000544537 KIDINS220Q9ULH0 1771 aa28.48■■■□□ 2.15
PRTN3-202ENST00000544537 YEATS2Q9ULM3 1422 aa28.48■■■□□ 2.15
PRTN3-202ENST00000544537 INO80Q9ULG1 1556 aaPredicted RBP28.48■■■□□ 2.15
PRTN3-202ENST00000544537 ATP7AQ04656 1500 aa28.45■■■□□ 2.15
PRTN3-202ENST00000544537 RSPH4AQ5TD94 716 aa28.45■■■□□ 2.14
PRTN3-202ENST00000544537 SPAG9O60271 1321 aaKnown RBP28.44■■■□□ 2.14
PRTN3-202ENST00000544537 ABCA6Q8N139 1617 aa28.44■■■□□ 2.14
PRTN3-202ENST00000544537 MYT1LQ9UL68 1186 aa28.44■■■□□ 2.14
PRTN3-202ENST00000544537 CROCC2H7BZ55 1655 aa28.44■■■□□ 2.14
PRTN3-202ENST00000544537 DNMT1P26358 1616 aaKnown RBP28.43■■■□□ 2.14
PRTN3-202ENST00000544537 DIP2CQ9Y2E4 1556 aa28.43■■■□□ 2.14
PRTN3-202ENST00000544537 FAM50AQ14320 339 aaKnown RBP28.4■■■□□ 2.14
PRTN3-202ENST00000544537 MAST1Q9Y2H9 1570 aa28.39■■■□□ 2.14
PRTN3-202ENST00000544537 RTEL1-TNFRSF6BF6WH68 1400 aa28.37■■■□□ 2.13
PRTN3-202ENST00000544537 DAPK1P53355 1430 aa28.37■■■□□ 2.13
PRTN3-202ENST00000544537 ATP10AO60312 1499 aa28.37■■■□□ 2.13
PRTN3-202ENST00000544537 ABCC5O15440 1437 aa28.36■■■□□ 2.13
PRTN3-202ENST00000544537 C9orf84Q5VXU9 1444 aa28.36■■■□□ 2.13
PRTN3-202ENST00000544537 RRBP1Q9P2E9 1410 aaKnown RBP28.36■■■□□ 2.13
PRTN3-202ENST00000544537 SHANK2Q9UPX8 1470 aa28.35■■■□□ 2.13
PRTN3-202ENST00000544537 REREQ9P2R6 1566 aa28.34■■■□□ 2.13
PRTN3-202ENST00000544537 TSPY4P0CV99 314 aa28.34■■■□□ 2.13
PRTN3-202ENST00000544537 TSPY10P0CW01 314 aa28.34■■■□□ 2.13
PRTN3-202ENST00000544537 ADGBQ8N7X0 1667 aa28.34■■■□□ 2.13
PRTN3-202ENST00000544537 SIGLEC1Q9BZZ2 1709 aa28.33■■■□□ 2.13
PRTN3-202ENST00000544537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.32■■■□□ 2.12
PRTN3-202ENST00000544537 PLXNC1O60486 1568 aa28.29■■■□□ 2.12
PRTN3-202ENST00000544537 A2MP01023 1474 aa28.25■■■□□ 2.11
PRTN3-202ENST00000544537 ARID4BQ4LE39 1312 aaPredicted RBP28.24■■■□□ 2.11
PRTN3-202ENST00000544537 AGLP35573 1532 aa28.23■■■□□ 2.11
PRTN3-202ENST00000544537 BCORL1Q5H9F3 1711 aa28.22■■■□□ 2.11
PRTN3-202ENST00000544537 ADGRL2O95490 1459 aa28.2■■■□□ 2.1
PRTN3-202ENST00000544537 PTPRKQ15262 1439 aa28.18■■■□□ 2.1
PRTN3-202ENST00000544537 CHIC2Q9UKJ5 165 aa28.18■■■□□ 2.1
PRTN3-202ENST00000544537 ANKRD30AQ9BXX3 1397 aa28.17■■■□□ 2.1
PRTN3-202ENST00000544537 DHX29Q7Z478 1369 aaKnown RBP28.16■■■□□ 2.1
PRTN3-202ENST00000544537 ITGAEP38570 1179 aa28.16■■■□□ 2.1
PRTN3-202ENST00000544537 KIF15Q9NS87 1388 aa28.15■■■□□ 2.1
PRTN3-202ENST00000544537 DUOX2Q9NRD8 1548 aa28.15■■■□□ 2.1
PRTN3-202ENST00000544537 ADAMTSL3P82987 1691 aa28.14■■■□□ 2.1
PRTN3-202ENST00000544537 NCOA1Q15788 1441 aa28.14■■■□□ 2.1
PRTN3-202ENST00000544537 EIF2AK4Q9P2K8 1649 aaKnown RBP28.11■■■□□ 2.09
PRTN3-202ENST00000544537 RRP7BPQ9NSQ0 103 aa28.1■■■□□ 2.09
PRTN3-202ENST00000544537 MADDQ8WXG6 1647 aa28.1■■■□□ 2.09
PRTN3-202ENST00000544537 FER1L4A9Z1Z3 1794 aa28.09■■■□□ 2.09
PRTN3-202ENST00000544537 MLECQ14165 292 aa28.09■■■□□ 2.09
PRTN3-202ENST00000544537 ROCK1Q13464 1354 aa28.09■■■□□ 2.09
PRTN3-202ENST00000544537 KDM4FA0A1W2PPD8 638 aa28.08■■■□□ 2.09
PRTN3-202ENST00000544537 ERBINQ96RT1 1412 aa28.07■■■□□ 2.08
PRTN3-202ENST00000544537 RIMS1Q86UR5 1692 aaKnown RBP28.03■■■□□ 2.08
PRTN3-202ENST00000544537 RNF17Q9BXT8 1623 aaKnown RBP28.03■■■□□ 2.08
PRTN3-202ENST00000544537 KIF3BO15066 747 aa28.02■■■□□ 2.08
PRTN3-202ENST00000544537 GCC2Q8IWJ2 1684 aa27.99■■■□□ 2.07
PRTN3-202ENST00000544537 ANKRD50Q9ULJ7 1429 aa27.99■■■□□ 2.07
PRTN3-202ENST00000544537 GGT6Q6P531 493 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms