RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ZNF777Q9ULD5 760 aaPredicted RBP45.63■■■■■ 4.9
CCM2-219ENST00000544363 MYO5CQ9NQX4 1742 aa45.62■■■■■ 4.89
CCM2-219ENST00000544363 DNMT1P26358 1616 aaKnown RBP45.56■■■■■ 4.88
CCM2-219ENST00000544363 PLCH2O75038 1416 aa45.55■■■■■ 4.88
CCM2-219ENST00000544363 DAPK1P53355 1430 aa45.53■■■■■ 4.88
CCM2-219ENST00000544363 ARHGAP5Q13017 1502 aa45.53■■■■■ 4.88
CCM2-219ENST00000544363 ABCA9Q8IUA7 1624 aa45.53■■■■■ 4.88
CCM2-219ENST00000544363 MAPKBP1O60336 1514 aa45.52■■■■■ 4.88
CCM2-219ENST00000544363 ABCC5O15440 1437 aa45.51■■■■■ 4.88
CCM2-219ENST00000544363 SETD5Q9C0A6 1442 aa45.49■■■■■ 4.87
CCM2-219ENST00000544363 SAMD9LQ8IVG5 1584 aa45.47■■■■■ 4.87
CCM2-219ENST00000544363 ARAP3Q8WWN8 1544 aa45.45■■■■■ 4.87
CCM2-219ENST00000544363 EFCAB2Q5VUJ9 269 aa45.41■■■■■ 4.86
CCM2-219ENST00000544363 HFM1A2PYH4 1435 aa45.4■■■■■ 4.86
CCM2-219ENST00000544363 RAB3GAP2Q9H2M9 1393 aa45.4■■■■■ 4.86
CCM2-219ENST00000544363 CHIC2Q9UKJ5 165 aa45.4■■■■■ 4.86
CCM2-219ENST00000544363 CCER1Q8TC90 406 aaPredicted RBP45.39■■■■■ 4.86
CCM2-219ENST00000544363 HRCP23327 699 aa45.37■■■■■ 4.85
CCM2-219ENST00000544363 AKNAQ7Z591 1439 aa45.36■■■■■ 4.85
CCM2-219ENST00000544363 ARHGEF5Q12774 1597 aa45.36■■■■■ 4.85
CCM2-219ENST00000544363 PLEKHH2Q8IVE3 1493 aa45.35■■■■■ 4.85
CCM2-219ENST00000544363 MBD5Q9P267 1494 aa45.35■■■■■ 4.85
CCM2-219ENST00000544363 CROCC2H7BZ55 1655 aa45.33■■■■■ 4.85
CCM2-219ENST00000544363 HNRNPMP52272 730 aaKnown RBP eCLIP45.33■■■■■ 4.852e-6■■■□□ 15.7
CCM2-219ENST00000544363 ROCK1Q13464 1354 aa45.33■■■■■ 4.85
CCM2-219ENST00000544363 NAIPQ13075 1403 aa45.32■■■■■ 4.85
CCM2-219ENST00000544363 KIAA1107Q9UPP5 1409 aa45.32■■■■■ 4.84
CCM2-219ENST00000544363 RSPH4AQ5TD94 716 aa45.3■■■■■ 4.84
CCM2-219ENST00000544363 SYCP2Q9BX26 1530 aa45.28■■■■■ 4.84
CCM2-219ENST00000544363 RRP7BPQ9NSQ0 103 aa45.26■■■■■ 4.84
CCM2-219ENST00000544363 SHANK2Q9UPX8 1470 aa45.26■■■■■ 4.84
CCM2-219ENST00000544363 CCDC141Q6ZP82 1450 aa45.24■■■■■ 4.83
CCM2-219ENST00000544363 CD109Q6YHK3 1445 aa45.23■■■■■ 4.83
CCM2-219ENST00000544363 FANCAO15360 1455 aa45.22■■■■■ 4.83
CCM2-219ENST00000544363 GCC2Q8IWJ2 1684 aa45.22■■■■■ 4.83
CCM2-219ENST00000544363 ABCC1P33527 1531 aa45.21■■■■■ 4.83
CCM2-219ENST00000544363 ADGBQ8N7X0 1667 aa45.21■■■■■ 4.83
CCM2-219ENST00000544363 ADGRL2O95490 1459 aa45.2■■■■■ 4.83
CCM2-219ENST00000544363 TSPY4P0CV99 314 aa45.19■■■■■ 4.83
CCM2-219ENST00000544363 TSPY10P0CW01 314 aa45.19■■■■■ 4.83
CCM2-219ENST00000544363 ARHGEF12Q9NZN5 1544 aa45.18■■■■■ 4.82
CCM2-219ENST00000544363 C9orf84Q5VXU9 1444 aa45.18■■■■■ 4.82
CCM2-219ENST00000544363 GLI2P10070 1586 aa45.17■■■■■ 4.82
CCM2-219ENST00000544363 NCOA1Q15788 1441 aa45.15■■■■■ 4.82
CCM2-219ENST00000544363 DHX57Q6P158 1386 aaKnown RBP45.14■■■■■ 4.82
CCM2-219ENST00000544363 ZEB1P37275 1124 aaPredicted RBP45.12■■■■■ 4.81
CCM2-219ENST00000544363 ANKRD30AQ9BXX3 1397 aa45.12■■■■■ 4.81
CCM2-219ENST00000544363 DIP2BQ9P265 1576 aa45.08■■■■■ 4.81
CCM2-219ENST00000544363 MAP3K4Q9Y6R4 1608 aa45.07■■■■■ 4.81
CCM2-219ENST00000544363 MAST1Q9Y2H9 1570 aa45.06■■■■■ 4.8
CCM2-219ENST00000544363 CFAP74Q9C0B2 1584 aa45.05■■■■■ 4.8
CCM2-219ENST00000544363 TRAPPC8Q9Y2L5 1435 aa45.03■■■■■ 4.8
CCM2-219ENST00000544363 ADGRL1O94910 1474 aa45.03■■■■■ 4.8
CCM2-219ENST00000544363 FAM69CQ0P6D2 419 aa45.01■■■■■ 4.8
CCM2-219ENST00000544363 KDM6BO15054 1643 aa45■■■■■ 4.79
CCM2-219ENST00000544363 SCAPERQ9BY12 1400 aa44.97■■■■■ 4.79
CCM2-219ENST00000544363 NEO1Q92859 1461 aa44.93■■■■■ 4.78
CCM2-219ENST00000544363 CLSPNQ9HAW4 1339 aa44.93■■■■■ 4.78
CCM2-219ENST00000544363 DNAJC5Q9H3Z4 198 aa44.93■■■■■ 4.78
CCM2-219ENST00000544363 ACIN1Q9UKV3 1341 aaKnown RBP44.92■■■■■ 4.78
CCM2-219ENST00000544363 KIF15Q9NS87 1388 aa44.9■■■■■ 4.78
CCM2-219ENST00000544363 AFAP1Q8N556 730 aa44.89■■■■■ 4.78
CCM2-219ENST00000544363 PLXNC1O60486 1568 aa44.87■■■■■ 4.77
CCM2-219ENST00000544363 ANKRD50Q9ULJ7 1429 aa44.87■■■■■ 4.77
CCM2-219ENST00000544363 SPAG9O60271 1321 aaKnown RBP44.84■■■■■ 4.77
CCM2-219ENST00000544363 RTEL1-TNFRSF6BF6WH68 1400 aa44.84■■■■■ 4.77
CCM2-219ENST00000544363 TRIM52Q96A61 297 aa44.79■■■■■ 4.76
CCM2-219ENST00000544363 KIF13AQ9H1H9 1805 aa44.78■■■■■ 4.76
CCM2-219ENST00000544363 ZNF518AQ6AHZ1 1483 aa44.78■■■■■ 4.76
CCM2-219ENST00000544363 ZFYVE16Q7Z3T8 1539 aa44.76■■■■■ 4.76
CCM2-219ENST00000544363 POGZQ7Z3K3 1410 aa44.74■■■■■ 4.75
CCM2-219ENST00000544363 INO80Q9ULG1 1556 aaPredicted RBP44.73■■■■■ 4.75
CCM2-219ENST00000544363 PPRC1Q5VV67 1664 aaKnown RBP44.72■■■■■ 4.75
CCM2-219ENST00000544363 ATP7AQ04656 1500 aa44.71■■■■■ 4.75
CCM2-219ENST00000544363 DUOX2Q9NRD8 1548 aa44.7■■■■■ 4.75
CCM2-219ENST00000544363 TSPOAP1O95153 1857 aa44.69■■■■■ 4.74
CCM2-219ENST00000544363 TEX14Q8IWB6 1497 aa44.69■■■■■ 4.74
CCM2-219ENST00000544363 DENND4BO75064 1496 aaPredicted RBP44.68■■■■■ 4.74
CCM2-219ENST00000544363 KDM5CP41229 1560 aa44.67■■■■■ 4.74
CCM2-219ENST00000544363 ERBINQ96RT1 1412 aa44.6■■■■■ 4.73
CCM2-219ENST00000544363 MPHOSPH9Q99550 1183 aa44.6■■■■■ 4.73
CCM2-219ENST00000544363 MYT1LQ9UL68 1186 aa44.58■■■■■ 4.73
CCM2-219ENST00000544363 KIDINS220Q9ULH0 1771 aa44.58■■■■■ 4.73
CCM2-219ENST00000544363 MLH3Q9UHC1 1453 aa44.57■■■■■ 4.73
CCM2-219ENST00000544363 RAPGEF3O95398 923 aa44.54■■■■■ 4.72
CCM2-219ENST00000544363 RICTORQ6R327 1708 aa44.54■■■■■ 4.72
CCM2-219ENST00000544363 PZPP20742 1482 aa44.53■■■■■ 4.72
CCM2-219ENST00000544363 HECW2Q9P2P5 1572 aa44.53■■■■■ 4.72
CCM2-219ENST00000544363 KDM5DQ9BY66 1539 aa44.5■■■■■ 4.71
CCM2-219ENST00000544363 NUP155O75694 1391 aa44.49■■■■■ 4.71
CCM2-219ENST00000544363 SLC4A1APQ9BWU0 796 aaKnown RBP44.49■■■■■ 4.71
CCM2-219ENST00000544363 UNC13BO14795 1591 aa44.46■■■■■ 4.71
CCM2-219ENST00000544363 DHX29Q7Z478 1369 aaKnown RBP44.44■■■■■ 4.7
CCM2-219ENST00000544363 FRMPD1Q5SYB0 1578 aa44.43■■■■■ 4.7
CCM2-219ENST00000544363 SIN3AQ96ST3 1273 aa44.38■■■■■ 4.69
CCM2-219ENST00000544363 MAGI2Q86UL8 1455 aa44.36■■■■■ 4.69
CCM2-219ENST00000544363 ZMYM4Q5VZL5 1548 aa44.35■■■■■ 4.69
CCM2-219ENST00000544363 A2MP01023 1474 aa44.34■■■■■ 4.69
CCM2-219ENST00000544363 ABCA6Q8N139 1617 aa44.34■■■■■ 4.69
CCM2-219ENST00000544363 EIF2AK4Q9P2K8 1649 aaKnown RBP44.34■■■■■ 4.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms