RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 YEATS2Q9ULM3 1422 aa45.15■■■■■ 4.82
PDCD2-211ENST00000544336 RIMS1Q86UR5 1692 aaKnown RBP45.13■■■■■ 4.82
PDCD2-211ENST00000544336 POGZQ7Z3K3 1410 aa45.09■■■■■ 4.81
PDCD2-211ENST00000544336 SIGLEC1Q9BZZ2 1709 aa45.09■■■■■ 4.81
PDCD2-211ENST00000544336 TROQ12816 1431 aaPredicted RBP45.07■■■■■ 4.81
PDCD2-211ENST00000544336 MAGI2Q86UL8 1455 aa45.06■■■■■ 4.8
PDCD2-211ENST00000544336 EFCAB2Q5VUJ9 269 aa45.05■■■■■ 4.8
PDCD2-211ENST00000544336 CLIP1P30622 1438 aa45.02■■■■■ 4.8
PDCD2-211ENST00000544336 PCF11O94913 1555 aaKnown RBP44.99■■■■■ 4.79
PDCD2-211ENST00000544336 ARHGAP5Q13017 1502 aa44.98■■■■■ 4.79
PDCD2-211ENST00000544336 PLPPR3Q6T4P5 718 aa44.97■■■■■ 4.79
PDCD2-211ENST00000544336 MLECQ14165 292 aa44.96■■■■■ 4.79
PDCD2-211ENST00000544336 CASKIN1Q8WXD9 1431 aa44.91■■■■■ 4.78
PDCD2-211ENST00000544336 FER1L4A9Z1Z3 1794 aa44.87■■■■■ 4.77
PDCD2-211ENST00000544336 CCDC18Q5T9S5 1454 aa44.87■■■■■ 4.77
PDCD2-211ENST00000544336 LMTK3Q96Q04 1460 aa44.87■■■■■ 4.77
PDCD2-211ENST00000544336 ATP10AO60312 1499 aa44.86■■■■■ 4.77
PDCD2-211ENST00000544336 CDC42BPBQ9Y5S2 1711 aa44.86■■■■■ 4.77
PDCD2-211ENST00000544336 ZNF518AQ6AHZ1 1483 aa44.84■■■■■ 4.77
PDCD2-211ENST00000544336 C9orf84Q5VXU9 1444 aa44.83■■■■■ 4.77
PDCD2-211ENST00000544336 AFAP1Q8N556 730 aa44.8■■■■■ 4.76
PDCD2-211ENST00000544336 PREX2Q70Z35 1606 aa44.78■■■■■ 4.76
PDCD2-211ENST00000544336 MYT1LQ9UL68 1186 aa44.77■■■■■ 4.76
PDCD2-211ENST00000544336 KDM5CP41229 1560 aa44.77■■■■■ 4.76
PDCD2-211ENST00000544336 FYCO1Q9BQS8 1478 aa44.74■■■■■ 4.75
PDCD2-211ENST00000544336 ARHGEF12Q9NZN5 1544 aa44.71■■■■■ 4.75
PDCD2-211ENST00000544336 HSPA2P54652 639 aa44.69■■■■■ 4.74
PDCD2-211ENST00000544336 CDC42BPAQ5VT25 1732 aa44.67■■■■■ 4.74
PDCD2-211ENST00000544336 ABCC1P33527 1531 aa44.66■■■■■ 4.74
PDCD2-211ENST00000544336 DIP2CQ9Y2E4 1556 aa44.66■■■■■ 4.74
PDCD2-211ENST00000544336 ITSN2Q9NZM3 1697 aa44.65■■■■■ 4.74
PDCD2-211ENST00000544336 ABCA6Q8N139 1617 aa44.62■■■■■ 4.73
PDCD2-211ENST00000544336 TRAPPC8Q9Y2L5 1435 aa44.62■■■■■ 4.73
PDCD2-211ENST00000544336 MLH3Q9UHC1 1453 aa44.57■■■■■ 4.73
PDCD2-211ENST00000544336 CEBPAP49715 358 aaPredicted RBP44.54■■■■■ 4.72
PDCD2-211ENST00000544336 REREQ9P2R6 1566 aa44.52■■■■■ 4.72
PDCD2-211ENST00000544336 ZNF777Q9ULD5 760 aaPredicted RBP44.51■■■■■ 4.72
PDCD2-211ENST00000544336 FBXO41Q8TF61 875 aa44.49■■■■■ 4.71
PDCD2-211ENST00000544336 PREX1Q8TCU6 1659 aa44.48■■■■■ 4.71
PDCD2-211ENST00000544336 KIDINS220Q9ULH0 1771 aa44.46■■■■■ 4.71
PDCD2-211ENST00000544336 SAMD9LQ8IVG5 1584 aa44.46■■■■■ 4.71
PDCD2-211ENST00000544336 GPATCH8Q9UKJ3 1502 aaKnown RBP44.43■■■■■ 4.7
PDCD2-211ENST00000544336 SYCP2Q9BX26 1530 aa44.41■■■■■ 4.7
PDCD2-211ENST00000544336 AGLP35573 1532 aa44.38■■■■■ 4.69
PDCD2-211ENST00000544336 MTUS2Q5JR59 1369 aa44.33■■■■■ 4.69
PDCD2-211ENST00000544336 HNRNPMP52272 730 aaKnown RBP eCLIP44.33■■■■■ 4.69
PDCD2-211ENST00000544336 C3P01024 1663 aa44.32■■■■■ 4.69
PDCD2-211ENST00000544336 ESF1Q9H501 851 aaKnown RBP44.32■■■■■ 4.69
PDCD2-211ENST00000544336 CCNB3Q8WWL7 1395 aa44.31■■■■■ 4.68
PDCD2-211ENST00000544336 CFDP1Q9UEE9 299 aaPredicted RBP44.3■■■■■ 4.68
PDCD2-211ENST00000544336 SPAG9O60271 1321 aaKnown RBP44.27■■■■■ 4.68
PDCD2-211ENST00000544336 UHRF1BP1Q6BDS2 1440 aa44.26■■■■■ 4.68
PDCD2-211ENST00000544336 SETD1BQ9UPS6 1966 aaKnown RBP44.23■■■■■ 4.67
PDCD2-211ENST00000544336 CEP162Q5TB80 1403 aa44.22■■■■■ 4.67
PDCD2-211ENST00000544336 SUPT6HQ7KZ85 1726 aaKnown RBP44.21■■■■■ 4.67
PDCD2-211ENST00000544336 PLEKHH2Q8IVE3 1493 aa44.21■■■■■ 4.67
PDCD2-211ENST00000544336 ATP7AQ04656 1500 aa44.2■■■■■ 4.67
PDCD2-211ENST00000544336 KIAA1107Q9UPP5 1409 aa44.19■■■■■ 4.66
PDCD2-211ENST00000544336 EHBP1L1Q8N3D4 1523 aa44.17■■■■■ 4.66
PDCD2-211ENST00000544336 STRCQ7RTU9 1775 aa44.16■■■■■ 4.66
PDCD2-211ENST00000544336 TIAM1Q13009 1591 aa44.16■■■■■ 4.66
PDCD2-211ENST00000544336 INO80Q9ULG1 1556 aaPredicted RBP44.16■■■■■ 4.66
PDCD2-211ENST00000544336 CNTLNQ9NXG0 1405 aa44.13■■■■■ 4.65
PDCD2-211ENST00000544336 ZNF644Q9H582 1327 aaPredicted RBP44.09■■■■■ 4.65
PDCD2-211ENST00000544336 CERKQ8TCT0 537 aa44.09■■■■■ 4.65
PDCD2-211ENST00000544336 A2MP01023 1474 aa44.06■■■■■ 4.64
PDCD2-211ENST00000544336 MROH2AA6NES4 1674 aa44.05■■■■■ 4.64
PDCD2-211ENST00000544336 PLXNC1O60486 1568 aa44.05■■■■■ 4.64
PDCD2-211ENST00000544336 DMRT2Q9Y5R5 561 aa44.01■■■■■ 4.64
PDCD2-211ENST00000544336 CLTCQ00610 1675 aaKnown RBP44■■■■■ 4.63
PDCD2-211ENST00000544336 ADGBQ8N7X0 1667 aa43.98■■■■■ 4.63
PDCD2-211ENST00000544336 ZMYM3Q14202 1370 aa43.96■■■■■ 4.63
PDCD2-211ENST00000544336 MBD5Q9P267 1494 aa43.95■■■■■ 4.63
PDCD2-211ENST00000544336 GGT6Q6P531 493 aa43.93■■■■■ 4.62
PDCD2-211ENST00000544336 NPATQ14207 1427 aa43.9■■■■■ 4.62
PDCD2-211ENST00000544336 NCOA2Q15596 1464 aa43.9■■■■■ 4.62
PDCD2-211ENST00000544336 PTPRTO14522 1441 aa43.84■■■■■ 4.61
PDCD2-211ENST00000544336 LOC105371045A0A1W2PR82 267 aa43.83■■■■■ 4.61
PDCD2-211ENST00000544336 CAMSAP2Q08AD1 1489 aa43.83■■■■■ 4.61
PDCD2-211ENST00000544336 RTEL1-TNFRSF6BF6WH68 1400 aa43.82■■■■■ 4.6
PDCD2-211ENST00000544336 NCOA1Q15788 1441 aa43.82■■■■■ 4.6
PDCD2-211ENST00000544336 CAMSAP1Q5T5Y3 1602 aa43.81■■■■■ 4.6
PDCD2-211ENST00000544336 CCDC141Q6ZP82 1450 aa43.78■■■■■ 4.6
PDCD2-211ENST00000544336 MYO3AQ8NEV4 1616 aa43.78■■■■■ 4.6
PDCD2-211ENST00000544336 PTPRKQ15262 1439 aa43.75■■■■■ 4.59
PDCD2-211ENST00000544336 DHX29Q7Z478 1369 aaKnown RBP43.74■■■■■ 4.59
PDCD2-211ENST00000544336 VPS8Q8N3P4 1428 aa43.73■■■■■ 4.59
PDCD2-211ENST00000544336 ZNF142P52746 1687 aaPredicted RBP43.72■■■■■ 4.59
PDCD2-211ENST00000544336 PPP6R1Q9UPN7 881 aa43.7■■■■■ 4.59
PDCD2-211ENST00000544336 CEP170BQ9Y4F5 1589 aaPredicted RBP43.67■■■■■ 4.58
PDCD2-211ENST00000544336 LRRC9Q6ZRR7 1453 aa43.67■■■■■ 4.58
PDCD2-211ENST00000544336 NCKAP5LQ9HCH0 1330 aa43.66■■■■■ 4.58
PDCD2-211ENST00000544336 KIF3BO15066 747 aa43.65■■■■■ 4.58
PDCD2-211ENST00000544336 RSPH4AQ5TD94 716 aa43.63■■■■■ 4.57
PDCD2-211ENST00000544336 ARHGEF5Q12774 1597 aa43.62■■■■■ 4.57
PDCD2-211ENST00000544336 LTBP4Q8N2S1 1624 aa43.62■■■■■ 4.57
PDCD2-211ENST00000544336 PLA2R1Q13018 1463 aa43.54■■■■■ 4.56
PDCD2-211ENST00000544336 TSPY4P0CV99 314 aa43.54■■■■■ 4.56
PDCD2-211ENST00000544336 TSPY10P0CW01 314 aa43.54■■■■■ 4.56
PDCD2-211ENST00000544336 KDM5DQ9BY66 1539 aa43.53■■■■■ 4.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms