RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 CFAP74Q9C0B2 1584 aa22.57■■□□□ 1.2
SSPN-208ENST00000544231 FANCAO15360 1455 aa22.56■■□□□ 1.2
SSPN-208ENST00000544231 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
SSPN-208ENST00000544231 CDC42BPAQ5VT25 1732 aa22.56■■□□□ 1.2
SSPN-208ENST00000544231 MYOM3Q5VTT5 1437 aa22.56■■□□□ 1.2
SSPN-208ENST00000544231 NEO1Q92859 1461 aa22.55■■□□□ 1.2
SSPN-208ENST00000544231 PPRC1Q5VV67 1664 aaKnown RBP22.54■■□□□ 1.2
SSPN-208ENST00000544231 MIA2Q96PC5 1412 aa22.52■■□□□ 1.2
SSPN-208ENST00000544231 CDC42BPBQ9Y5S2 1711 aa22.51■■□□□ 1.19
SSPN-208ENST00000544231 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
SSPN-208ENST00000544231 ZNF777Q9ULD5 760 aaPredicted RBP22.49■■□□□ 1.19
SSPN-208ENST00000544231 PLEKHH2Q8IVE3 1493 aa22.48■■□□□ 1.19
SSPN-208ENST00000544231 FGD6Q6ZV73 1430 aa22.47■■□□□ 1.19
SSPN-208ENST00000544231 ADGRL1O94910 1474 aa22.46■■□□□ 1.19
SSPN-208ENST00000544231 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
SSPN-208ENST00000544231 KIAA1107Q9UPP5 1409 aa22.42■■□□□ 1.18
SSPN-208ENST00000544231 ABCC1P33527 1531 aa22.41■■□□□ 1.18
SSPN-208ENST00000544231 CAMSAP2Q08AD1 1489 aa22.41■■□□□ 1.18
SSPN-208ENST00000544231 SCAPERQ9BY12 1400 aa22.41■■□□□ 1.18
SSPN-208ENST00000544231 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
SSPN-208ENST00000544231 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.18
SSPN-208ENST00000544231 TCOF1Q13428 1488 aaKnown RBP22.39■■□□□ 1.17
SSPN-208ENST00000544231 ZNF644Q9H582 1327 aaPredicted RBP22.38■■□□□ 1.17
SSPN-208ENST00000544231 SYCP2Q9BX26 1530 aa22.37■■□□□ 1.17
SSPN-208ENST00000544231 KDM6BO15054 1643 aa22.37■■□□□ 1.17
SSPN-208ENST00000544231 RSPH4AQ5TD94 716 aa22.36■■□□□ 1.17
SSPN-208ENST00000544231 POGZQ7Z3K3 1410 aa22.35■■□□□ 1.17
SSPN-208ENST00000544231 RRBP1Q9P2E9 1410 aaKnown RBP22.35■■□□□ 1.17
SSPN-208ENST00000544231 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
SSPN-208ENST00000544231 ZNF518AQ6AHZ1 1483 aa22.34■■□□□ 1.17
SSPN-208ENST00000544231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.34■■□□□ 1.17
SSPN-208ENST00000544231 HNRNPMP52272 730 aaKnown RBP eCLIP22.33■■□□□ 1.17
SSPN-208ENST00000544231 ARHGEF12Q9NZN5 1544 aa22.32■■□□□ 1.16
SSPN-208ENST00000544231 ARHGEF5Q12774 1597 aa22.31■■□□□ 1.16
SSPN-208ENST00000544231 CCDC141Q6ZP82 1450 aa22.31■■□□□ 1.16
SSPN-208ENST00000544231 MBD5Q9P267 1494 aa22.31■■□□□ 1.16
SSPN-208ENST00000544231 COL17A1Q9UMD9 1497 aaPredicted RBP22.31■■□□□ 1.16
SSPN-208ENST00000544231 RAPGEF3O95398 923 aa22.31■■□□□ 1.16
SSPN-208ENST00000544231 TRAPPC8Q9Y2L5 1435 aa22.3■■□□□ 1.16
SSPN-208ENST00000544231 AFAP1Q8N556 730 aa22.28■■□□□ 1.16
SSPN-208ENST00000544231 RICTORQ6R327 1708 aa22.28■■□□□ 1.16
SSPN-208ENST00000544231 TSPY4P0CV99 314 aa22.27■■□□□ 1.16
SSPN-208ENST00000544231 TSPY10P0CW01 314 aa22.27■■□□□ 1.16
SSPN-208ENST00000544231 KDM5CP41229 1560 aa22.26■■□□□ 1.15
SSPN-208ENST00000544231 FRMPD1Q5SYB0 1578 aa22.25■■□□□ 1.15
SSPN-208ENST00000544231 ZMYM4Q5VZL5 1548 aa22.25■■□□□ 1.15
SSPN-208ENST00000544231 SPAG9O60271 1321 aaKnown RBP22.25■■□□□ 1.15
SSPN-208ENST00000544231 DNMT1P26358 1616 aaKnown RBP22.24■■□□□ 1.15
SSPN-208ENST00000544231 MAGI2Q86UL8 1455 aa22.24■■□□□ 1.15
SSPN-208ENST00000544231 MYT1LQ9UL68 1186 aa22.24■■□□□ 1.15
SSPN-208ENST00000544231 DAPK1P53355 1430 aa22.23■■□□□ 1.15
SSPN-208ENST00000544231 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
SSPN-208ENST00000544231 ABCC5O15440 1437 aa22.22■■□□□ 1.15
SSPN-208ENST00000544231 MLH3Q9UHC1 1453 aa22.22■■□□□ 1.15
SSPN-208ENST00000544231 HECW2Q9P2P5 1572 aa22.21■■□□□ 1.15
SSPN-208ENST00000544231 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.14
SSPN-208ENST00000544231 C9orf84Q5VXU9 1444 aa22.2■■□□□ 1.14
SSPN-208ENST00000544231 CROCC2H7BZ55 1655 aa22.17■■□□□ 1.14
SSPN-208ENST00000544231 MAST1Q9Y2H9 1570 aa22.17■■□□□ 1.14
SSPN-208ENST00000544231 ATP7AQ04656 1500 aa22.17■■□□□ 1.14
SSPN-208ENST00000544231 ZFYVE16Q7Z3T8 1539 aa22.17■■□□□ 1.14
SSPN-208ENST00000544231 INO80Q9ULG1 1556 aaPredicted RBP22.16■■□□□ 1.14
SSPN-208ENST00000544231 ITGAEP38570 1179 aa22.16■■□□□ 1.14
SSPN-208ENST00000544231 ARHGEF40Q8TER5 1519 aa22.14■■□□□ 1.13
SSPN-208ENST00000544231 ANKRD30AQ9BXX3 1397 aa22.12■■□□□ 1.13
SSPN-208ENST00000544231 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
SSPN-208ENST00000544231 CHIC2Q9UKJ5 165 aa22.11■■□□□ 1.13
SSPN-208ENST00000544231 YEATS2Q9ULM3 1422 aa22.11■■□□□ 1.13
SSPN-208ENST00000544231 ADGRL2O95490 1459 aa22.1■■□□□ 1.13
SSPN-208ENST00000544231 ROCK1Q13464 1354 aa22.1■■□□□ 1.13
SSPN-208ENST00000544231 ATP10AO60312 1499 aa22.09■■□□□ 1.13
SSPN-208ENST00000544231 PLXNC1O60486 1568 aa22.09■■□□□ 1.13
SSPN-208ENST00000544231 DIP2CQ9Y2E4 1556 aa22.08■■□□□ 1.13
SSPN-208ENST00000544231 ADGBQ8N7X0 1667 aa22.08■■□□□ 1.13
SSPN-208ENST00000544231 PTPRKQ15262 1439 aa22.08■■□□□ 1.13
SSPN-208ENST00000544231 ABCA6Q8N139 1617 aa22.07■■□□□ 1.12
SSPN-208ENST00000544231 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
SSPN-208ENST00000544231 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
SSPN-208ENST00000544231 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
SSPN-208ENST00000544231 A2MP01023 1474 aa22.04■■□□□ 1.12
SSPN-208ENST00000544231 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
SSPN-208ENST00000544231 DUOX2Q9NRD8 1548 aa22.03■■□□□ 1.12
SSPN-208ENST00000544231 RRP7BPQ9NSQ0 103 aa22.03■■□□□ 1.12
SSPN-208ENST00000544231 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
SSPN-208ENST00000544231 ERBINQ96RT1 1412 aa21.98■■□□□ 1.11
SSPN-208ENST00000544231 AGLP35573 1532 aa21.97■■□□□ 1.11
SSPN-208ENST00000544231 ARID4BQ4LE39 1312 aaPredicted RBP21.97■■□□□ 1.11
SSPN-208ENST00000544231 HFM1A2PYH4 1435 aa21.97■■□□□ 1.11
SSPN-208ENST00000544231 ANKRD50Q9ULJ7 1429 aa21.96■■□□□ 1.11
SSPN-208ENST00000544231 NAIPQ13075 1403 aa21.93■■□□□ 1.1
SSPN-208ENST00000544231 EIF2AK4Q9P2K8 1649 aaKnown RBP21.93■■□□□ 1.1
SSPN-208ENST00000544231 KIF3BO15066 747 aa21.91■■□□□ 1.1
SSPN-208ENST00000544231 GCC2Q8IWJ2 1684 aa21.91■■□□□ 1.1
SSPN-208ENST00000544231 BCORL1Q5H9F3 1711 aa21.89■■□□□ 1.09
SSPN-208ENST00000544231 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
SSPN-208ENST00000544231 ACIN1Q9UKV3 1341 aaKnown RBP21.86■■□□□ 1.09
SSPN-208ENST00000544231 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
SSPN-208ENST00000544231 SIGLEC1Q9BZZ2 1709 aa21.85■■□□□ 1.09
SSPN-208ENST00000544231 MLECQ14165 292 aa21.84■■□□□ 1.09
SSPN-208ENST00000544231 GGT6Q6P531 493 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms