RNA–Protein interactions for RNA: ENST00000544179.1

TM7SF3-216, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 2

Gene TM7SF3, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-216ENST00000544179 TMC2Q8TDI7 906 aa12.52□□□□□ -0.41
TM7SF3-216ENST00000544179 KIF3CO14782 793 aa12.51□□□□□ -0.41
TM7SF3-216ENST00000544179 HOXB3P14651 431 aaPredicted RBP12.51□□□□□ -0.41
TM7SF3-216ENST00000544179 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
TM7SF3-216ENST00000544179 POTEMA6NI47 508 aa12.49□□□□□ -0.41
TM7SF3-216ENST00000544179 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
TM7SF3-216ENST00000544179 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
TM7SF3-216ENST00000544179 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
TM7SF3-216ENST00000544179 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
TM7SF3-216ENST00000544179 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
TM7SF3-216ENST00000544179 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
TM7SF3-216ENST00000544179 MARVELD3Q96A59 401 aa12.41□□□□□ -0.42
TM7SF3-216ENST00000544179 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
TM7SF3-216ENST00000544179 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
TM7SF3-216ENST00000544179 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
TM7SF3-216ENST00000544179 PDE4AP27815 886 aa12.38□□□□□ -0.43
TM7SF3-216ENST00000544179 FOXK1P85037 733 aa12.38□□□□□ -0.43
TM7SF3-216ENST00000544179 HOXB1P14653 301 aaPredicted RBP12.37□□□□□ -0.43
TM7SF3-216ENST00000544179 DSG2Q14126 1118 aa12.37□□□□□ -0.43
TM7SF3-216ENST00000544179 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
TM7SF3-216ENST00000544179 PLPP6Q8IY26 295 aa12.36□□□□□ -0.43
TM7SF3-216ENST00000544179 NCKAP5LQ9HCH0 1330 aa12.36□□□□□ -0.43
TM7SF3-216ENST00000544179 EMP3P54852 163 aa12.35□□□□□ -0.43
TM7SF3-216ENST00000544179 GPR153Q6NV75 609 aa12.35□□□□□ -0.43
TM7SF3-216ENST00000544179 SLC34A2O95436 690 aa12.33□□□□□ -0.44
TM7SF3-216ENST00000544179 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
TM7SF3-216ENST00000544179 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
TM7SF3-216ENST00000544179 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
TM7SF3-216ENST00000544179 FAM205CA6NFA0 338 aa12.29□□□□□ -0.44
TM7SF3-216ENST00000544179 PPP1R15BQ5SWA1 713 aa12.29□□□□□ -0.44
TM7SF3-216ENST00000544179 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
TM7SF3-216ENST00000544179 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
TM7SF3-216ENST00000544179 PCDHGA4Q9Y5G9 962 aa12.28□□□□□ -0.44
TM7SF3-216ENST00000544179 DDX27Q96GQ7 796 aaKnown RBP12.27□□□□□ -0.45
TM7SF3-216ENST00000544179 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
TM7SF3-216ENST00000544179 ERBB3P21860 1342 aa12.26□□□□□ -0.45
TM7SF3-216ENST00000544179 MFSD10Q14728 455 aa12.25□□□□□ -0.45
TM7SF3-216ENST00000544179 PTCD2Q8WV60 388 aaKnown RBP12.25□□□□□ -0.45
TM7SF3-216ENST00000544179 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
TM7SF3-216ENST00000544179 POTEB3A0JP26 581 aa12.23□□□□□ -0.45
TM7SF3-216ENST00000544179 POTEBQ6S5H4 581 aa12.23□□□□□ -0.45
TM7SF3-216ENST00000544179 TBC1D12O60347 775 aa12.22□□□□□ -0.45
TM7SF3-216ENST00000544179 NUDT7P0C024 238 aa12.22□□□□□ -0.45
TM7SF3-216ENST00000544179 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
TM7SF3-216ENST00000544179 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
TM7SF3-216ENST00000544179 ZNF316A6NFI3 1004 aaPredicted RBP12.18□□□□□ -0.46
TM7SF3-216ENST00000544179 UPF1Q92900 1129 aaKnown RBP eCLIP12.18□□□□□ -0.46
TM7SF3-216ENST00000544179 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
TM7SF3-216ENST00000544179 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
TM7SF3-216ENST00000544179 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
TM7SF3-216ENST00000544179 PLCB2Q00722 1185 aa12.12□□□□□ -0.47
TM7SF3-216ENST00000544179 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
TM7SF3-216ENST00000544179 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
TM7SF3-216ENST00000544179 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
TM7SF3-216ENST00000544179 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
TM7SF3-216ENST00000544179 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
TM7SF3-216ENST00000544179 PSDA5PKW4 1024 aaPredicted RBP12.06□□□□□ -0.48
TM7SF3-216ENST00000544179 EVI5O60447 810 aa12.05□□□□□ -0.48
TM7SF3-216ENST00000544179 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
TM7SF3-216ENST00000544179 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
TM7SF3-216ENST00000544179 E2F4Q16254 413 aa12.03□□□□□ -0.48
TM7SF3-216ENST00000544179 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
TM7SF3-216ENST00000544179 PLSCR2Q9NRY7 297 aa12.02□□□□□ -0.49
TM7SF3-216ENST00000544179 DPYSL4O14531 572 aa12□□□□□ -0.49
TM7SF3-216ENST00000544179 PPP4R3BQ5MIZ7 849 aa11.98□□□□□ -0.49
TM7SF3-216ENST00000544179 PBX2P40425 430 aa11.96□□□□□ -0.49
TM7SF3-216ENST00000544179 ZNF454Q8N9F8 522 aa11.96□□□□□ -0.49
TM7SF3-216ENST00000544179 SPNS2Q8IVW8 549 aa11.95□□□□□ -0.5
TM7SF3-216ENST00000544179 AXIN2Q9Y2T1 843 aa11.95□□□□□ -0.5
TM7SF3-216ENST00000544179 FOSBP53539 338 aa11.94□□□□□ -0.5
TM7SF3-216ENST00000544179 POTEEQ6S8J3 1075 aa11.94□□□□□ -0.5
TM7SF3-216ENST00000544179 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
TM7SF3-216ENST00000544179 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
TM7SF3-216ENST00000544179 JPH4Q96JJ6 628 aa11.92□□□□□ -0.5
TM7SF3-216ENST00000544179 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
TM7SF3-216ENST00000544179 ARIH1Q9Y4X5 557 aaPredicted RBP11.91□□□□□ -0.5
TM7SF3-216ENST00000544179 LSM11P83369 360 aaKnown RBP eCLIP11.89□□□□□ -0.51
TM7SF3-216ENST00000544179 SPDYE16A6NNV3 312 aaPredicted RBP11.88□□□□□ -0.51
TM7SF3-216ENST00000544179 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
TM7SF3-216ENST00000544179 PCDHGA10Q9Y5H3 936 aa11.88□□□□□ -0.51
TM7SF3-216ENST00000544179 PHF14O94880 888 aa11.87□□□□□ -0.51
TM7SF3-216ENST00000544179 PSEN2P49810 448 aa11.87□□□□□ -0.51
TM7SF3-216ENST00000544179 PDIA6Q15084 440 aa11.87□□□□□ -0.51
TM7SF3-216ENST00000544179 BCL2L12Q9HB09 334 aa11.86□□□□□ -0.51
TM7SF3-216ENST00000544179 PTGER2P43116 358 aa11.85□□□□□ -0.51
TM7SF3-216ENST00000544179 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
TM7SF3-216ENST00000544179 KCNK17Q96T54 332 aa11.85□□□□□ -0.51
TM7SF3-216ENST00000544179 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
TM7SF3-216ENST00000544179 DMRTA1Q5VZB9 504 aa11.84□□□□□ -0.51
TM7SF3-216ENST00000544179 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
TM7SF3-216ENST00000544179 DDX12PQ92771 950 aa11.84□□□□□ -0.51
TM7SF3-216ENST00000544179 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
TM7SF3-216ENST00000544179 PTPREP23469 700 aa11.83□□□□□ -0.52
TM7SF3-216ENST00000544179 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
TM7SF3-216ENST00000544179 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
TM7SF3-216ENST00000544179 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
TM7SF3-216ENST00000544179 EPAS1Q99814 870 aa11.81□□□□□ -0.52
TM7SF3-216ENST00000544179 ADGRD1Q6QNK2 874 aa11.79□□□□□ -0.52
TM7SF3-216ENST00000544179 TK2O00142 265 aa11.78□□□□□ -0.52
TM7SF3-216ENST00000544179 GRXCR2A6NFK2 248 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms