RNA–Protein interactions for RNA: ENST00000544125.1

MDM2-231, Transcript of MDM2 proto-oncogene, human

TSL 2

Gene MDM2, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-231	ENST00000544125	NCKAP5L	Q9HCH0	1330 aa		11.12	□□□□□ -0.63
MDM2-231	ENST00000544125	TMC2	Q8TDI7	906 aa		11.12	□□□□□ -0.63
MDM2-231	ENST00000544125	CRISPLD2	Q9H0B8	497 aa		11.11	□□□□□ -0.63
MDM2-231	ENST00000544125	POTEB2	H3BUK9	544 aa		11.09	□□□□□ -0.63
MDM2-231	ENST00000544125	GPHN	Q9NQX3	736 aa	Predicted RBP	11.09	□□□□□ -0.63
MDM2-231	ENST00000544125	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.09	□□□□□ -0.63
MDM2-231	ENST00000544125	DDX27	Q96GQ7	796 aa	Known RBP	11.07	□□□□□ -0.64
MDM2-231	ENST00000544125	C2orf72	A6NCS6	295 aa		11.06	□□□□□ -0.64
MDM2-231	ENST00000544125	POTEJ	P0CG39	1038 aa		11.06	□□□□□ -0.64
MDM2-231	ENST00000544125	MFSD10	Q14728	455 aa		11.04	□□□□□ -0.64
MDM2-231	ENST00000544125	TMEM92	Q6UXU6	159 aa		11.04	□□□□□ -0.64
MDM2-231	ENST00000544125	MAMSTR	Q6ZN01	415 aa		11.04	□□□□□ -0.64
MDM2-231	ENST00000544125	SCUBE2	Q9NQ36	999 aa		11.04	□□□□□ -0.64
MDM2-231	ENST00000544125	PPP1R15B	Q5SWA1	713 aa		11.03	□□□□□ -0.64
MDM2-231	ENST00000544125	KIF3C	O14782	793 aa		11.02	□□□□□ -0.65
MDM2-231	ENST00000544125	DSG2	Q14126	1118 aa		11.02	□□□□□ -0.65
MDM2-231	ENST00000544125	FOXK1	P85037	733 aa		11.01	□□□□□ -0.65
MDM2-231	ENST00000544125	E2F4	Q16254	413 aa		11	□□□□□ -0.65
MDM2-231	ENST00000544125	P3H3	Q8IVL6	736 aa		10.99	□□□□□ -0.65
MDM2-231	ENST00000544125	PLPP6	Q8IY26	295 aa		10.99	□□□□□ -0.65
MDM2-231	ENST00000544125	LHX8	Q68G74	356 aa		10.98	□□□□□ -0.65
MDM2-231	ENST00000544125	SLAIN1	Q8ND83	568 aa		10.98	□□□□□ -0.65
MDM2-231	ENST00000544125	KCNV2	Q8TDN2	545 aa		10.95	□□□□□ -0.66
MDM2-231	ENST00000544125	CAMK2B	Q13554	666 aa		10.91	□□□□□ -0.66
MDM2-231	ENST00000544125	OTUD5	Q96G74	571 aa		10.9	□□□□□ -0.66
MDM2-231	ENST00000544125	NBR1	Q14596	966 aa		10.89	□□□□□ -0.67
MDM2-231	ENST00000544125	ARHGEF1	Q92888	912 aa	Known RBP	10.88	□□□□□ -0.67
MDM2-231	ENST00000544125	BCAN	Q96GW7	911 aa		10.88	□□□□□ -0.67
MDM2-231	ENST00000544125	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.87	□□□□□ -0.67	2e-9	■■□□□ 12.5
MDM2-231	ENST00000544125	EMILIN3	Q9NT22	766 aa		10.87	□□□□□ -0.67
MDM2-231	ENST00000544125	MAP3K9	P80192	1104 aa		10.84	□□□□□ -0.67
MDM2-231	ENST00000544125	DPYSL4	O14531	572 aa		10.83	□□□□□ -0.68
MDM2-231	ENST00000544125	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.83	□□□□□ -0.68
MDM2-231	ENST00000544125	TBC1D12	O60347	775 aa		10.82	□□□□□ -0.68
MDM2-231	ENST00000544125	DOK7	Q18PE1	504 aa		10.82	□□□□□ -0.68
MDM2-231	ENST00000544125	SNPH	O15079	494 aa		10.81	□□□□□ -0.68
MDM2-231	ENST00000544125	SLC34A2	O95436	690 aa		10.81	□□□□□ -0.68
MDM2-231	ENST00000544125	OXER1	Q8TDS5	423 aa		10.81	□□□□□ -0.68
MDM2-231	ENST00000544125	RIMBP2	O15034	1052 aa		10.8	□□□□□ -0.68
MDM2-231	ENST00000544125	ZNF710	Q8N1W2	664 aa		10.79	□□□□□ -0.68
MDM2-231	ENST00000544125	PTCD2	Q8WV60	388 aa	Known RBP	10.79	□□□□□ -0.68
MDM2-231	ENST00000544125	HOXB3	P14651	431 aa	Predicted RBP	10.77	□□□□□ -0.69
MDM2-231	ENST00000544125	PCDHGA4	Q9Y5G9	962 aa		10.77	□□□□□ -0.69
MDM2-231	ENST00000544125	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.76	□□□□□ -0.69
MDM2-231	ENST00000544125	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.75	□□□□□ -0.69
MDM2-231	ENST00000544125	SEMA3E	O15041	775 aa		10.74	□□□□□ -0.69
MDM2-231	ENST00000544125	EVI5	O60447	810 aa		10.73	□□□□□ -0.69
MDM2-231	ENST00000544125	PDIA6	Q15084	440 aa		10.73	□□□□□ -0.69
MDM2-231	ENST00000544125	ZSWIM6	Q9HCJ5	1215 aa		10.73	□□□□□ -0.69
MDM2-231	ENST00000544125	ARSI	Q5FYB1	569 aa		10.72	□□□□□ -0.69
MDM2-231	ENST00000544125	TULP1	O00294	542 aa	Predicted RBP	10.7	□□□□□ -0.7
MDM2-231	ENST00000544125	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
MDM2-231	ENST00000544125	TESPA1	A2RU30	521 aa	Predicted RBP	10.68	□□□□□ -0.7
MDM2-231	ENST00000544125	NUDT7	P0C024	238 aa		10.68	□□□□□ -0.7
MDM2-231	ENST00000544125	SMYD5	Q6GMV2	418 aa		10.68	□□□□□ -0.7
MDM2-231	ENST00000544125	GPR153	Q6NV75	609 aa		10.68	□□□□□ -0.7
MDM2-231	ENST00000544125	MLLT3	P42568	568 aa	Predicted RBP	10.66	□□□□□ -0.7
MDM2-231	ENST00000544125	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.66	□□□□□ -0.7
MDM2-231	ENST00000544125	GRXCR2	A6NFK2	248 aa		10.65	□□□□□ -0.7
MDM2-231	ENST00000544125	DDX12P	Q92771	950 aa		10.65	□□□□□ -0.7
MDM2-231	ENST00000544125	HOXB1	P14653	301 aa	Predicted RBP	10.64	□□□□□ -0.71
MDM2-231	ENST00000544125	FAM163A	Q96GL9	167 aa	Predicted RBP	10.64	□□□□□ -0.71
MDM2-231	ENST00000544125	PTGER2	P43116	358 aa		10.63	□□□□□ -0.71
MDM2-231	ENST00000544125	KDM4F	A0A1W2PPD8	638 aa		10.61	□□□□□ -0.71
MDM2-231	ENST00000544125	ST18	O60284	1047 aa		10.6	□□□□□ -0.71
MDM2-231	ENST00000544125	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.59	□□□□□ -0.71
MDM2-231	ENST00000544125	LHX6	Q9UPM6	363 aa		10.59	□□□□□ -0.71
MDM2-231	ENST00000544125	LMOD2	Q6P5Q4	547 aa		10.58	□□□□□ -0.72
MDM2-231	ENST00000544125	PHF14	O94880	888 aa		10.57	□□□□□ -0.72
MDM2-231	ENST00000544125	ZNF454	Q8N9F8	522 aa		10.57	□□□□□ -0.72
MDM2-231	ENST00000544125	JPH4	Q96JJ6	628 aa		10.56	□□□□□ -0.72
MDM2-231	ENST00000544125	EPAS1	Q99814	870 aa		10.56	□□□□□ -0.72
MDM2-231	ENST00000544125	PCDHGA10	Q9Y5H3	936 aa		10.56	□□□□□ -0.72
MDM2-231	ENST00000544125	OSBP	P22059	807 aa		10.55	□□□□□ -0.72
MDM2-231	ENST00000544125	RBM26	Q5T8P6	1007 aa	Known RBP	10.55	□□□□□ -0.72
MDM2-231	ENST00000544125	PSD	A5PKW4	1024 aa	Predicted RBP	10.54	□□□□□ -0.72
MDM2-231	ENST00000544125	FOSB	P53539	338 aa		10.54	□□□□□ -0.72
MDM2-231	ENST00000544125	EMP3	P54852	163 aa		10.54	□□□□□ -0.72
MDM2-231	ENST00000544125	TYW1B	Q6NUM6	668 aa		10.54	□□□□□ -0.72
MDM2-231	ENST00000544125	MARVELD3	Q96A59	401 aa		10.54	□□□□□ -0.72
MDM2-231	ENST00000544125	RBM33	Q96EV2	1170 aa	Known RBP	10.53	□□□□□ -0.72
MDM2-231	ENST00000544125	ERBB3	P21860	1342 aa		10.53	□□□□□ -0.72
MDM2-231	ENST00000544125	PPP4R3B	Q5MIZ7	849 aa		10.52	□□□□□ -0.73
MDM2-231	ENST00000544125	ZDHHC16	Q969W1	377 aa		10.52	□□□□□ -0.73
MDM2-231	ENST00000544125	MAP3K7	O43318	606 aa		10.51	□□□□□ -0.73
MDM2-231	ENST00000544125	FBXW7	Q969H0	707 aa		10.51	□□□□□ -0.73
MDM2-231	ENST00000544125	NUTM2F	A1L443	756 aa		10.5	□□□□□ -0.73
MDM2-231	ENST00000544125	EN1	Q05925	392 aa	Predicted RBP	10.49	□□□□□ -0.73
MDM2-231	ENST00000544125	GPIHBP1	Q8IV16	184 aa		10.49	□□□□□ -0.73
MDM2-231	ENST00000544125	FAM205C	A6NFA0	338 aa		10.48	□□□□□ -0.73
MDM2-231	ENST00000544125	PRIM1	P49642	420 aa	Known RBP	10.48	□□□□□ -0.73
MDM2-231	ENST00000544125	TPRN	Q4KMQ1	711 aa		10.48	□□□□□ -0.73
MDM2-231	ENST00000544125	VARS2	Q5ST30	1063 aa	Known RBP	10.48	□□□□□ -0.73
MDM2-231	ENST00000544125	LCE2D	Q5TA82	110 aa	Predicted RBP	10.46	□□□□□ -0.73
MDM2-231	ENST00000544125	ADAM33	Q9BZ11	813 aa		10.46	□□□□□ -0.73
MDM2-231	ENST00000544125	TSR1	Q2NL82	804 aa	Known RBP	10.44	□□□□□ -0.74
MDM2-231	ENST00000544125	C6orf132	Q5T0Z8	1188 aa		10.44	□□□□□ -0.74
MDM2-231	ENST00000544125	ZC3H15	Q8WU90	426 aa	Known RBP	10.43	□□□□□ -0.74
MDM2-231	ENST00000544125	HS3ST6	Q96QI5	342 aa		10.42	□□□□□ -0.74
MDM2-231	ENST00000544125	BCL2L12	Q9HB09	334 aa		10.42	□□□□□ -0.74

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