RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 ARID4BQ4LE39 1312 aaPredicted RBP30.22■■■□□ 2.43
TDG-208ENST00000544060 POGZQ7Z3K3 1410 aa30.22■■■□□ 2.43
TDG-208ENST00000544060 ZFYVE16Q7Z3T8 1539 aa30.2■■■□□ 2.42
TDG-208ENST00000544060 CEP162Q5TB80 1403 aa30.18■■■□□ 2.42
TDG-208ENST00000544060 MAGI2Q86UL8 1455 aa30.18■■■□□ 2.42
TDG-208ENST00000544060 PREX2Q70Z35 1606 aa30.16■■■□□ 2.42
TDG-208ENST00000544060 ADAMTSL3P82987 1691 aa30.15■■■□□ 2.42
TDG-208ENST00000544060 BCORL1Q5H9F3 1711 aa30.15■■■□□ 2.42
TDG-208ENST00000544060 CDC42BPBQ9Y5S2 1711 aa30.15■■■□□ 2.42
TDG-208ENST00000544060 YEATS2Q9ULM3 1422 aa30.13■■■□□ 2.41
TDG-208ENST00000544060 ZNF518AQ6AHZ1 1483 aa30.11■■■□□ 2.41
TDG-208ENST00000544060 CDC42BPAQ5VT25 1732 aa30.08■■■□□ 2.41
TDG-208ENST00000544060 MADDQ8WXG6 1647 aa30.07■■■□□ 2.4
TDG-208ENST00000544060 PTPRMP28827 1452 aa30.05■■■□□ 2.4
TDG-208ENST00000544060 HECW2Q9P2P5 1572 aa30.04■■■□□ 2.4
TDG-208ENST00000544060 MTUS2Q5JR59 1369 aa30.03■■■□□ 2.4
TDG-208ENST00000544060 KDM5CP41229 1560 aa30.03■■■□□ 2.4
TDG-208ENST00000544060 ABCC1P33527 1531 aa30.03■■■□□ 2.4
TDG-208ENST00000544060 AFAP1Q8N556 730 aa30.02■■■□□ 2.4
TDG-208ENST00000544060 MYT1LQ9UL68 1186 aa30.02■■■□□ 2.4
TDG-208ENST00000544060 ATP10AO60312 1499 aa30.01■■■□□ 2.4
TDG-208ENST00000544060 SIGLEC1Q9BZZ2 1709 aa30.01■■■□□ 2.39
TDG-208ENST00000544060 LOC105371045A0A1W2PR82 267 aa30■■■□□ 2.39
TDG-208ENST00000544060 ITSN2Q9NZM3 1697 aa30■■■□□ 2.39
TDG-208ENST00000544060 C9orf84Q5VXU9 1444 aa29.99■■■□□ 2.39
TDG-208ENST00000544060 RIMS1Q86UR5 1692 aaKnown RBP29.98■■■□□ 2.39
TDG-208ENST00000544060 GPATCH8Q9UKJ3 1502 aaKnown RBP29.96■■■□□ 2.39
TDG-208ENST00000544060 ZNF777Q9ULD5 760 aaPredicted RBP29.96■■■□□ 2.39
TDG-208ENST00000544060 EHBP1L1Q8N3D4 1523 aa29.96■■■□□ 2.39
TDG-208ENST00000544060 ARHGEF12Q9NZN5 1544 aa29.96■■■□□ 2.39
TDG-208ENST00000544060 CCNB3Q8WWL7 1395 aa29.95■■■□□ 2.39
TDG-208ENST00000544060 MLECQ14165 292 aa29.94■■■□□ 2.38
TDG-208ENST00000544060 TRAPPC8Q9Y2L5 1435 aa29.94■■■□□ 2.38
TDG-208ENST00000544060 SAMD9LQ8IVG5 1584 aa29.93■■■□□ 2.38
TDG-208ENST00000544060 MLH3Q9UHC1 1453 aa29.92■■■□□ 2.38
TDG-208ENST00000544060 DIP2CQ9Y2E4 1556 aa29.9■■■□□ 2.38
TDG-208ENST00000544060 CFDP1Q9UEE9 299 aaPredicted RBP29.9■■■□□ 2.38
TDG-208ENST00000544060 FER1L4A9Z1Z3 1794 aa29.89■■■□□ 2.38
TDG-208ENST00000544060 ABCA6Q8N139 1617 aa29.89■■■□□ 2.37
TDG-208ENST00000544060 SYCP2Q9BX26 1530 aa29.88■■■□□ 2.37
TDG-208ENST00000544060 VPS8Q8N3P4 1428 aa29.85■■■□□ 2.37
TDG-208ENST00000544060 PLEKHH2Q8IVE3 1493 aa29.85■■■□□ 2.37
TDG-208ENST00000544060 TIAM1Q13009 1591 aa29.85■■■□□ 2.37
TDG-208ENST00000544060 REREQ9P2R6 1566 aa29.84■■■□□ 2.37
TDG-208ENST00000544060 PLPPR3Q6T4P5 718 aa29.83■■■□□ 2.37
TDG-208ENST00000544060 HNRNPMP52272 730 aaKnown RBP eCLIP29.82■■■□□ 2.36
TDG-208ENST00000544060 KIDINS220Q9ULH0 1771 aa29.82■■■□□ 2.36
TDG-208ENST00000544060 KIAA1107Q9UPP5 1409 aa29.8■■■□□ 2.36
TDG-208ENST00000544060 SUPT6HQ7KZ85 1726 aaKnown RBP29.79■■■□□ 2.36
TDG-208ENST00000544060 SPAG9O60271 1321 aaKnown RBP29.77■■■□□ 2.36
TDG-208ENST00000544060 NCOA2Q15596 1464 aa29.75■■■□□ 2.35
TDG-208ENST00000544060 AGLP35573 1532 aa29.74■■■□□ 2.35
TDG-208ENST00000544060 ATP7AQ04656 1500 aa29.72■■■□□ 2.35
TDG-208ENST00000544060 LMTK3Q96Q04 1460 aa29.7■■■□□ 2.35
TDG-208ENST00000544060 ZNF644Q9H582 1327 aaPredicted RBP29.7■■■□□ 2.34
TDG-208ENST00000544060 INO80Q9ULG1 1556 aaPredicted RBP29.69■■■□□ 2.34
TDG-208ENST00000544060 LRRC9Q6ZRR7 1453 aa29.68■■■□□ 2.34
TDG-208ENST00000544060 ESF1Q9H501 851 aaKnown RBP29.66■■■□□ 2.34
TDG-208ENST00000544060 MAP3K1Q13233 1512 aa29.64■■■□□ 2.34
TDG-208ENST00000544060 MBD5Q9P267 1494 aa29.62■■■□□ 2.33
TDG-208ENST00000544060 CAMSAP2Q08AD1 1489 aa29.61■■■□□ 2.33
TDG-208ENST00000544060 CEBPAP49715 358 aaPredicted RBP29.61■■■□□ 2.33
TDG-208ENST00000544060 A2MP01023 1474 aa29.6■■■□□ 2.33
TDG-208ENST00000544060 ADGBQ8N7X0 1667 aa29.58■■■□□ 2.33
TDG-208ENST00000544060 PREX1Q8TCU6 1659 aa29.57■■■□□ 2.32
TDG-208ENST00000544060 PLXNC1O60486 1568 aa29.57■■■□□ 2.32
TDG-208ENST00000544060 CCDC141Q6ZP82 1450 aa29.56■■■□□ 2.32
TDG-208ENST00000544060 C3P01024 1663 aa29.56■■■□□ 2.32
TDG-208ENST00000544060 CNTLNQ9NXG0 1405 aa29.55■■■□□ 2.32
TDG-208ENST00000544060 HSPA2P54652 639 aa29.55■■■□□ 2.32
TDG-208ENST00000544060 APLP2Q06481 763 aa29.55■■■□□ 2.32
TDG-208ENST00000544060 KANK4Q5T7N3 995 aaPredicted RBP29.55■■■□□ 2.32
TDG-208ENST00000544060 RTEL1-TNFRSF6BF6WH68 1400 aa29.54■■■□□ 2.32
TDG-208ENST00000544060 RSPH4AQ5TD94 716 aa29.51■■■□□ 2.31
TDG-208ENST00000544060 ARHGEF5Q12774 1597 aa29.49■■■□□ 2.31
TDG-208ENST00000544060 UHRF1BP1Q6BDS2 1440 aa29.48■■■□□ 2.31
TDG-208ENST00000544060 MROH2AA6NES4 1674 aa29.47■■■□□ 2.31
TDG-208ENST00000544060 MYOM3Q5VTT5 1437 aa29.45■■■□□ 2.31
TDG-208ENST00000544060 GGT6Q6P531 493 aa29.45■■■□□ 2.31
TDG-208ENST00000544060 SETD1BQ9UPS6 1966 aaKnown RBP29.44■■■□□ 2.3
TDG-208ENST00000544060 CLTCQ00610 1675 aaKnown RBP29.44■■■□□ 2.3
TDG-208ENST00000544060 TSPY4P0CV99 314 aa29.43■■■□□ 2.3
TDG-208ENST00000544060 TSPY10P0CW01 314 aa29.43■■■□□ 2.3
TDG-208ENST00000544060 MIA2Q96PC5 1412 aa29.43■■■□□ 2.3
TDG-208ENST00000544060 DHX29Q7Z478 1369 aaKnown RBP29.42■■■□□ 2.3
TDG-208ENST00000544060 ZMYM3Q14202 1370 aa29.39■■■□□ 2.3
TDG-208ENST00000544060 ILDR1Q86SU0 546 aaPredicted RBP29.37■■■□□ 2.29
TDG-208ENST00000544060 PPP6R1Q9UPN7 881 aa29.36■■■□□ 2.29
TDG-208ENST00000544060 NPATQ14207 1427 aa29.36■■■□□ 2.29
TDG-208ENST00000544060 KIF3BO15066 747 aa29.34■■■□□ 2.29
TDG-208ENST00000544060 MAST1Q9Y2H9 1570 aa29.34■■■□□ 2.29
TDG-208ENST00000544060 PTPN23Q9H3S7 1636 aa29.29■■■□□ 2.28
TDG-208ENST00000544060 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
TDG-208ENST00000544060 FAM135AQ9P2D6 1515 aa29.25■■■□□ 2.27
TDG-208ENST00000544060 STRCQ7RTU9 1775 aa29.25■■■□□ 2.27
TDG-208ENST00000544060 PTPRKQ15262 1439 aa29.25■■■□□ 2.27
TDG-208ENST00000544060 FGD6Q6ZV73 1430 aa29.23■■■□□ 2.27
TDG-208ENST00000544060 DMRT2Q9Y5R5 561 aa29.23■■■□□ 2.27
TDG-208ENST00000544060 MYO3AQ8NEV4 1616 aa29.23■■■□□ 2.27
TDG-208ENST00000544060 CROCC2H7BZ55 1655 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms