RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
SMCO2-206ENST00000543991 ATMINO43313 823 aaPredicted RBP13.35□□□□□ -0.27
SMCO2-206ENST00000543991 IER5LQ5T953 404 aa13.35□□□□□ -0.27
SMCO2-206ENST00000543991 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
SMCO2-206ENST00000543991 DSG2Q14126 1118 aa13.34□□□□□ -0.27
SMCO2-206ENST00000543991 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
SMCO2-206ENST00000543991 TMC2Q8TDI7 906 aa13.34□□□□□ -0.27
SMCO2-206ENST00000543991 OCEL1Q9H607 264 aa13.34□□□□□ -0.27
SMCO2-206ENST00000543991 TMEM121BQ9BXQ6 578 aaPredicted RBP13.32□□□□□ -0.28
SMCO2-206ENST00000543991 ZMYND10O75800 440 aa13.31□□□□□ -0.28
SMCO2-206ENST00000543991 FOXK1P85037 733 aa13.31□□□□□ -0.28
SMCO2-206ENST00000543991 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
SMCO2-206ENST00000543991 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
SMCO2-206ENST00000543991 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
SMCO2-206ENST00000543991 DPYSL4O14531 572 aa13.29□□□□□ -0.28
SMCO2-206ENST00000543991 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
SMCO2-206ENST00000543991 SLC24A3Q9HC58 644 aa13.29□□□□□ -0.28
SMCO2-206ENST00000543991 G3V3G9 751 aa13.28□□□□□ -0.28
SMCO2-206ENST00000543991 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
SMCO2-206ENST00000543991 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
SMCO2-206ENST00000543991 PDIA6Q15084 440 aa13.26□□□□□ -0.29
SMCO2-206ENST00000543991 KIF3CO14782 793 aa13.24□□□□□ -0.29
SMCO2-206ENST00000543991 PLCG2P16885 1265 aa13.24□□□□□ -0.29
SMCO2-206ENST00000543991 RBM26Q5T8P6 1007 aaKnown RBP13.24□□□□□ -0.29
SMCO2-206ENST00000543991 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
SMCO2-206ENST00000543991 PLPP6Q8IY26 295 aa13.24□□□□□ -0.29
SMCO2-206ENST00000543991 C2orf72A6NCS6 295 aa13.23□□□□□ -0.29
SMCO2-206ENST00000543991 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
SMCO2-206ENST00000543991 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
SMCO2-206ENST00000543991 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
SMCO2-206ENST00000543991 GABBR2O75899 941 aa13.18□□□□□ -0.3
SMCO2-206ENST00000543991 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
SMCO2-206ENST00000543991 SEC24BO95487 1268 aa13.14□□□□□ -0.31
SMCO2-206ENST00000543991 AK7Q96M32 723 aa13.13□□□□□ -0.31
SMCO2-206ENST00000543991 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
SMCO2-206ENST00000543991 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
SMCO2-206ENST00000543991 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
SMCO2-206ENST00000543991 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
SMCO2-206ENST00000543991 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
SMCO2-206ENST00000543991 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
SMCO2-206ENST00000543991 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
SMCO2-206ENST00000543991 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
SMCO2-206ENST00000543991 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
SMCO2-206ENST00000543991 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMCO2-206ENST00000543991 GRXCR2A6NFK2 248 aa13.06□□□□□ -0.32
SMCO2-206ENST00000543991 C7P10643 843 aa13.04□□□□□ -0.32
SMCO2-206ENST00000543991 GPR37O15354 613 aa13.03□□□□□ -0.32
SMCO2-206ENST00000543991 PTGER2P43116 358 aa13.03□□□□□ -0.32
SMCO2-206ENST00000543991 TBC1D12O60347 775 aa13.02□□□□□ -0.33
SMCO2-206ENST00000543991 POTEFA5A3E0 1075 aa13.01□□□□□ -0.33
SMCO2-206ENST00000543991 OSBPP22059 807 aa13.01□□□□□ -0.33
SMCO2-206ENST00000543991 TRIM66O15016 1216 aa13□□□□□ -0.33
SMCO2-206ENST00000543991 NISCHQ9Y2I1 1504 aa12.99□□□□□ -0.33
SMCO2-206ENST00000543991 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
SMCO2-206ENST00000543991 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
SMCO2-206ENST00000543991 EVI5O60447 810 aa12.97□□□□□ -0.33
SMCO2-206ENST00000543991 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
SMCO2-206ENST00000543991 GPBP1L1Q9HC44 474 aaPredicted RBP12.97□□□□□ -0.33
SMCO2-206ENST00000543991 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
SMCO2-206ENST00000543991 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
SMCO2-206ENST00000543991 DDX12PQ92771 950 aa12.96□□□□□ -0.33
SMCO2-206ENST00000543991 PDE4DQ08499 809 aa12.95□□□□□ -0.34
SMCO2-206ENST00000543991 PTCD2Q8WV60 388 aaKnown RBP12.95□□□□□ -0.34
SMCO2-206ENST00000543991 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
SMCO2-206ENST00000543991 KDM4CQ9H3R0 1056 aa12.93□□□□□ -0.34
SMCO2-206ENST00000543991 FCHSD2O94868 740 aa12.92□□□□□ -0.34
SMCO2-206ENST00000543991 SLC34A2O95436 690 aa12.92□□□□□ -0.34
SMCO2-206ENST00000543991 MAP2K5Q13163 448 aa12.92□□□□□ -0.34
SMCO2-206ENST00000543991 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
SMCO2-206ENST00000543991 GNPATO15228 680 aa12.91□□□□□ -0.34
SMCO2-206ENST00000543991 IRF6O14896 467 aa12.9□□□□□ -0.34
SMCO2-206ENST00000543991 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
SMCO2-206ENST00000543991 HIC1Q14526 733 aa12.9□□□□□ -0.34
SMCO2-206ENST00000543991 POTEHQ6S545 545 aa12.9□□□□□ -0.34
SMCO2-206ENST00000543991 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
SMCO2-206ENST00000543991 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
SMCO2-206ENST00000543991 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
SMCO2-206ENST00000543991 CCDC102AQ96A19 550 aa12.87□□□□□ -0.35
SMCO2-206ENST00000543991 PTGDRQ13258 359 aa12.84□□□□□ -0.35
SMCO2-206ENST00000543991 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
SMCO2-206ENST00000543991 FECHP22830 423 aa12.83□□□□□ -0.36
SMCO2-206ENST00000543991 AMHR2Q16671 573 aa12.82□□□□□ -0.36
SMCO2-206ENST00000543991 EPAS1Q99814 870 aa12.82□□□□□ -0.36
SMCO2-206ENST00000543991 PHF14O94880 888 aa12.81□□□□□ -0.36
SMCO2-206ENST00000543991 EN1Q05925 392 aaPredicted RBP12.78□□□□□ -0.36
SMCO2-206ENST00000543991 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
SMCO2-206ENST00000543991 PCDHGA4Q9Y5G9 962 aa12.77□□□□□ -0.37
SMCO2-206ENST00000543991 PARP9Q8IXQ6 854 aa12.76□□□□□ -0.37
SMCO2-206ENST00000543991 FAM117AQ9C073 453 aa12.76□□□□□ -0.37
SMCO2-206ENST00000543991 MAP3K7O43318 606 aa12.74□□□□□ -0.37
SMCO2-206ENST00000543991 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
SMCO2-206ENST00000543991 NPDC1Q9NQX5 325 aaPredicted RBP12.74□□□□□ -0.37
SMCO2-206ENST00000543991 PCDHGA10Q9Y5H3 936 aa12.74□□□□□ -0.37
SMCO2-206ENST00000543991 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
SMCO2-206ENST00000543991 SLAIN1Q8ND83 568 aa12.73□□□□□ -0.37
SMCO2-206ENST00000543991 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
SMCO2-206ENST00000543991 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
SMCO2-206ENST00000543991 KDM4FA0A1W2PPD8 638 aa12.7□□□□□ -0.38
SMCO2-206ENST00000543991 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
SMCO2-206ENST00000543991 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms