RNA–Protein interactions for RNA: ENST00000543615.1

FAM60A-208, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-208ENST00000543615 CDC42BPBQ9Y5S2 1711 aa29.28■■■□□ 2.28
FAM60A-208ENST00000543615 PREX2Q70Z35 1606 aa29.27■■■□□ 2.28
FAM60A-208ENST00000543615 ZFYVE16Q7Z3T8 1539 aa29.26■■■□□ 2.27
FAM60A-208ENST00000543615 POGZQ7Z3K3 1410 aa29.26■■■□□ 2.27
FAM60A-208ENST00000543615 EFCAB2Q5VUJ9 269 aa29.24■■■□□ 2.27
FAM60A-208ENST00000543615 ARHGAP5Q13017 1502 aa29.24■■■□□ 2.27
FAM60A-208ENST00000543615 SCAPERQ9BY12 1400 aa29.21■■■□□ 2.27
FAM60A-208ENST00000543615 CDC42BPAQ5VT25 1732 aa29.2■■■□□ 2.27
FAM60A-208ENST00000543615 ZNF518AQ6AHZ1 1483 aa29.18■■■□□ 2.26
FAM60A-208ENST00000543615 KDM5CP41229 1560 aa29.18■■■□□ 2.26
FAM60A-208ENST00000543615 MADDQ8WXG6 1647 aa29.15■■■□□ 2.26
FAM60A-208ENST00000543615 HECW2Q9P2P5 1572 aa29.13■■■□□ 2.25
FAM60A-208ENST00000543615 ITSN2Q9NZM3 1697 aa29.13■■■□□ 2.25
FAM60A-208ENST00000543615 PTPRMP28827 1452 aa29.1■■■□□ 2.25
FAM60A-208ENST00000543615 ABCC1P33527 1531 aa29.1■■■□□ 2.25
FAM60A-208ENST00000543615 YEATS2Q9ULM3 1422 aa29.09■■■□□ 2.25
FAM60A-208ENST00000543615 ARID4BQ4LE39 1312 aaPredicted RBP29.08■■■□□ 2.25
FAM60A-208ENST00000543615 CEP162Q5TB80 1403 aa29.08■■■□□ 2.25
FAM60A-208ENST00000543615 RIMS1Q86UR5 1692 aaKnown RBP29.07■■■□□ 2.24
FAM60A-208ENST00000543615 SIGLEC1Q9BZZ2 1709 aa29.07■■■□□ 2.24
FAM60A-208ENST00000543615 FER1L4A9Z1Z3 1794 aa29.06■■■□□ 2.24
FAM60A-208ENST00000543615 REREQ9P2R6 1566 aa29.06■■■□□ 2.24
FAM60A-208ENST00000543615 C9orf84Q5VXU9 1444 aa29.06■■■□□ 2.24
FAM60A-208ENST00000543615 ATP10AO60312 1499 aa29.05■■■□□ 2.24
FAM60A-208ENST00000543615 EHBP1L1Q8N3D4 1523 aa29.02■■■□□ 2.24
FAM60A-208ENST00000543615 MLH3Q9UHC1 1453 aa29.02■■■□□ 2.24
FAM60A-208ENST00000543615 DIP2CQ9Y2E4 1556 aa28.98■■■□□ 2.23
FAM60A-208ENST00000543615 MTUS2Q5JR59 1369 aa28.97■■■□□ 2.23
FAM60A-208ENST00000543615 PLEKHH2Q8IVE3 1493 aa28.97■■■□□ 2.23
FAM60A-208ENST00000543615 SAMD9LQ8IVG5 1584 aa28.96■■■□□ 2.23
FAM60A-208ENST00000543615 GPATCH8Q9UKJ3 1502 aaKnown RBP28.96■■■□□ 2.23
FAM60A-208ENST00000543615 ABCA6Q8N139 1617 aa28.96■■■□□ 2.23
FAM60A-208ENST00000543615 ARHGEF12Q9NZN5 1544 aa28.94■■■□□ 2.22
FAM60A-208ENST00000543615 KIDINS220Q9ULH0 1771 aa28.93■■■□□ 2.22
FAM60A-208ENST00000543615 AGLP35573 1532 aa28.9■■■□□ 2.22
FAM60A-208ENST00000543615 KIAA1107Q9UPP5 1409 aa28.9■■■□□ 2.22
FAM60A-208ENST00000543615 SUPT6HQ7KZ85 1726 aaKnown RBP28.89■■■□□ 2.22
FAM60A-208ENST00000543615 AFAP1Q8N556 730 aa28.89■■■□□ 2.22
FAM60A-208ENST00000543615 SYCP2Q9BX26 1530 aa28.89■■■□□ 2.21
FAM60A-208ENST00000543615 CCNB3Q8WWL7 1395 aa28.88■■■□□ 2.21
FAM60A-208ENST00000543615 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
FAM60A-208ENST00000543615 TRAPPC8Q9Y2L5 1435 aa28.88■■■□□ 2.21
FAM60A-208ENST00000543615 SETD1BQ9UPS6 1966 aaKnown RBP28.82■■■□□ 2.2
FAM60A-208ENST00000543615 MYT1LQ9UL68 1186 aa28.82■■■□□ 2.2
FAM60A-208ENST00000543615 VPS8Q8N3P4 1428 aa28.82■■■□□ 2.2
FAM60A-208ENST00000543615 INO80Q9ULG1 1556 aaPredicted RBP28.82■■■□□ 2.2
FAM60A-208ENST00000543615 CFDP1Q9UEE9 299 aaPredicted RBP28.8■■■□□ 2.2
FAM60A-208ENST00000543615 LMTK3Q96Q04 1460 aa28.79■■■□□ 2.2
FAM60A-208ENST00000543615 PREX1Q8TCU6 1659 aa28.79■■■□□ 2.2
FAM60A-208ENST00000543615 ATP7AQ04656 1500 aa28.79■■■□□ 2.2
FAM60A-208ENST00000543615 MAP3K1Q13233 1512 aa28.78■■■□□ 2.2
FAM60A-208ENST00000543615 ADGBQ8N7X0 1667 aa28.77■■■□□ 2.2
FAM60A-208ENST00000543615 ZNF777Q9ULD5 760 aaPredicted RBP28.75■■■□□ 2.19
FAM60A-208ENST00000543615 MLECQ14165 292 aa28.73■■■□□ 2.19
FAM60A-208ENST00000543615 MROH2AA6NES4 1674 aa28.73■■■□□ 2.19
FAM60A-208ENST00000543615 SPAG9O60271 1321 aaKnown RBP28.72■■■□□ 2.19
FAM60A-208ENST00000543615 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
FAM60A-208ENST00000543615 PLXNC1O60486 1568 aa28.71■■■□□ 2.19
FAM60A-208ENST00000543615 C3P01024 1663 aa28.7■■■□□ 2.18
FAM60A-208ENST00000543615 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
FAM60A-208ENST00000543615 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
FAM60A-208ENST00000543615 HNRNPMP52272 730 aaKnown RBP eCLIP28.66■■■□□ 2.183e-8■■■■□ 22
FAM60A-208ENST00000543615 MBD5Q9P267 1494 aa28.66■■■□□ 2.18
FAM60A-208ENST00000543615 RTEL1-TNFRSF6BF6WH68 1400 aa28.65■■■□□ 2.18
FAM60A-208ENST00000543615 LOC105371045A0A1W2PR82 267 aa28.64■■■□□ 2.18
FAM60A-208ENST00000543615 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
FAM60A-208ENST00000543615 A2MP01023 1474 aa28.62■■■□□ 2.17
FAM60A-208ENST00000543615 CAMSAP2Q08AD1 1489 aa28.61■■■□□ 2.17
FAM60A-208ENST00000543615 RSPH4AQ5TD94 716 aa28.61■■■□□ 2.17
FAM60A-208ENST00000543615 ESF1Q9H501 851 aaKnown RBP28.61■■■□□ 2.17
FAM60A-208ENST00000543615 CCDC141Q6ZP82 1450 aa28.6■■■□□ 2.17
FAM60A-208ENST00000543615 UHRF1BP1Q6BDS2 1440 aa28.55■■■□□ 2.16
FAM60A-208ENST00000543615 FAM135AQ9P2D6 1515 aa28.54■■■□□ 2.16
FAM60A-208ENST00000543615 CLTCQ00610 1675 aaKnown RBP28.53■■■□□ 2.16
FAM60A-208ENST00000543615 ZNF644Q9H582 1327 aaPredicted RBP28.52■■■□□ 2.16
FAM60A-208ENST00000543615 PLPPR3Q6T4P5 718 aa28.51■■■□□ 2.15
FAM60A-208ENST00000543615 PPP6R1Q9UPN7 881 aa28.51■■■□□ 2.15
FAM60A-208ENST00000543615 NPATQ14207 1427 aa28.51■■■□□ 2.15
FAM60A-208ENST00000543615 MIA2Q96PC5 1412 aa28.51■■■□□ 2.15
FAM60A-208ENST00000543615 MAST1Q9Y2H9 1570 aa28.5■■■□□ 2.15
FAM60A-208ENST00000543615 MYOM3Q5VTT5 1437 aa28.46■■■□□ 2.15
FAM60A-208ENST00000543615 CEBPAP49715 358 aaPredicted RBP28.46■■■□□ 2.15
FAM60A-208ENST00000543615 DHX29Q7Z478 1369 aaKnown RBP28.45■■■□□ 2.14
FAM60A-208ENST00000543615 STRCQ7RTU9 1775 aa28.43■■■□□ 2.14
FAM60A-208ENST00000543615 ZNF142P52746 1687 aaPredicted RBP28.43■■■□□ 2.14
FAM60A-208ENST00000543615 HSPA2P54652 639 aa28.43■■■□□ 2.14
FAM60A-208ENST00000543615 APLP2Q06481 763 aa28.41■■■□□ 2.14
FAM60A-208ENST00000543615 EIF2AK4Q9P2K8 1649 aaKnown RBP28.4■■■□□ 2.14
FAM60A-208ENST00000543615 ZMYM3Q14202 1370 aa28.39■■■□□ 2.14
FAM60A-208ENST00000543615 TSPY4P0CV99 314 aa28.39■■■□□ 2.14
FAM60A-208ENST00000543615 TSPY10P0CW01 314 aa28.39■■■□□ 2.14
FAM60A-208ENST00000543615 CROCC2H7BZ55 1655 aa28.38■■■□□ 2.13
FAM60A-208ENST00000543615 MYO3AQ8NEV4 1616 aa28.37■■■□□ 2.13
FAM60A-208ENST00000543615 KANK4Q5T7N3 995 aaPredicted RBP28.36■■■□□ 2.13
FAM60A-208ENST00000543615 ILDR1Q86SU0 546 aaPredicted RBP28.36■■■□□ 2.13
FAM60A-208ENST00000543615 KDM5DQ9BY66 1539 aa28.35■■■□□ 2.13
FAM60A-208ENST00000543615 DMRT2Q9Y5R5 561 aa28.35■■■□□ 2.13
FAM60A-208ENST00000543615 RNF17Q9BXT8 1623 aaKnown RBP28.35■■■□□ 2.13
FAM60A-208ENST00000543615 ZC3H13Q5T200 1668 aaKnown RBP28.35■■■□□ 2.13
FAM60A-208ENST00000543615 GGT6Q6P531 493 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms