RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 ZMYM4Q5VZL5 1548 aa34.6■■■■□ 3.13
PSME3-204ENST00000543428 POGZQ7Z3K3 1410 aa34.58■■■■□ 3.13
PSME3-204ENST00000543428 ZFYVE16Q7Z3T8 1539 aa34.56■■■■□ 3.12
PSME3-204ENST00000543428 MAGI2Q86UL8 1455 aa34.55■■■■□ 3.12
PSME3-204ENST00000543428 ADAMTSL3P82987 1691 aa34.53■■■■□ 3.12
PSME3-204ENST00000543428 BCORL1Q5H9F3 1711 aa34.52■■■■□ 3.12
PSME3-204ENST00000543428 YEATS2Q9ULM3 1422 aa34.51■■■■□ 3.12
PSME3-204ENST00000543428 CEP162Q5TB80 1403 aa34.47■■■■□ 3.11
PSME3-204ENST00000543428 CDC42BPBQ9Y5S2 1711 aa34.47■■■■□ 3.11
PSME3-204ENST00000543428 PREX2Q70Z35 1606 aa34.46■■■■□ 3.11
PSME3-204ENST00000543428 ZNF518AQ6AHZ1 1483 aa34.45■■■■□ 3.1
PSME3-204ENST00000543428 HECW2Q9P2P5 1572 aa34.45■■■■□ 3.1
PSME3-204ENST00000543428 PTPRMP28827 1452 aa34.44■■■■□ 3.1
PSME3-204ENST00000543428 MADDQ8WXG6 1647 aa34.42■■■■□ 3.1
PSME3-204ENST00000543428 MYT1LQ9UL68 1186 aa34.42■■■■□ 3.1
PSME3-204ENST00000543428 AFAP1Q8N556 730 aa34.4■■■■□ 3.1
PSME3-204ENST00000543428 CDC42BPAQ5VT25 1732 aa34.38■■■■□ 3.09
PSME3-204ENST00000543428 ATP10AO60312 1499 aa34.38■■■■□ 3.09
PSME3-204ENST00000543428 MTUS2Q5JR59 1369 aa34.36■■■■□ 3.09
PSME3-204ENST00000543428 KDM5CP41229 1560 aa34.34■■■■□ 3.09
PSME3-204ENST00000543428 MLECQ14165 292 aa34.34■■■■□ 3.09
PSME3-204ENST00000543428 SIGLEC1Q9BZZ2 1709 aa34.34■■■■□ 3.09
PSME3-204ENST00000543428 C9orf84Q5VXU9 1444 aa34.33■■■■□ 3.09
PSME3-204ENST00000543428 ZNF777Q9ULD5 760 aaPredicted RBP34.33■■■■□ 3.09
PSME3-204ENST00000543428 RIMS1Q86UR5 1692 aaKnown RBP34.33■■■■□ 3.09
PSME3-204ENST00000543428 ABCC1P33527 1531 aa34.33■■■■□ 3.09
PSME3-204ENST00000543428 LOC105371045A0A1W2PR82 267 aa34.31■■■■□ 3.08
PSME3-204ENST00000543428 ITSN2Q9NZM3 1697 aa34.28■■■■□ 3.08
PSME3-204ENST00000543428 ARHGEF12Q9NZN5 1544 aa34.28■■■■□ 3.08
PSME3-204ENST00000543428 GPATCH8Q9UKJ3 1502 aaKnown RBP34.28■■■■□ 3.08
PSME3-204ENST00000543428 TRAPPC8Q9Y2L5 1435 aa34.28■■■■□ 3.08
PSME3-204ENST00000543428 CCNB3Q8WWL7 1395 aa34.27■■■■□ 3.08
PSME3-204ENST00000543428 CFDP1Q9UEE9 299 aaPredicted RBP34.24■■■■□ 3.07
PSME3-204ENST00000543428 MLH3Q9UHC1 1453 aa34.23■■■■□ 3.07
PSME3-204ENST00000543428 PLPPR3Q6T4P5 718 aa34.23■■■■□ 3.07
PSME3-204ENST00000543428 FER1L4A9Z1Z3 1794 aa34.21■■■■□ 3.07
PSME3-204ENST00000543428 EHBP1L1Q8N3D4 1523 aa34.21■■■■□ 3.07
PSME3-204ENST00000543428 SAMD9LQ8IVG5 1584 aa34.21■■■■□ 3.07
PSME3-204ENST00000543428 DIP2CQ9Y2E4 1556 aa34.2■■■■□ 3.07
PSME3-204ENST00000543428 ABCA6Q8N139 1617 aa34.17■■■■□ 3.06
PSME3-204ENST00000543428 SYCP2Q9BX26 1530 aa34.17■■■■□ 3.06
PSME3-204ENST00000543428 HNRNPMP52272 730 aaKnown RBP eCLIP34.16■■■■□ 3.06
PSME3-204ENST00000543428 PLEKHH2Q8IVE3 1493 aa34.14■■■■□ 3.06
PSME3-204ENST00000543428 REREQ9P2R6 1566 aa34.12■■■■□ 3.05
PSME3-204ENST00000543428 KIDINS220Q9ULH0 1771 aa34.11■■■■□ 3.05
PSME3-204ENST00000543428 TIAM1Q13009 1591 aa34.11■■■■□ 3.05
PSME3-204ENST00000543428 SPAG9O60271 1321 aaKnown RBP34.1■■■■□ 3.05
PSME3-204ENST00000543428 KIAA1107Q9UPP5 1409 aa34.1■■■■□ 3.05
PSME3-204ENST00000543428 VPS8Q8N3P4 1428 aa34.09■■■■□ 3.05
PSME3-204ENST00000543428 LMTK3Q96Q04 1460 aa34.04■■■■□ 3.04
PSME3-204ENST00000543428 SUPT6HQ7KZ85 1726 aaKnown RBP34.04■■■■□ 3.04
PSME3-204ENST00000543428 AGLP35573 1532 aa34.03■■■■□ 3.04
PSME3-204ENST00000543428 ESF1Q9H501 851 aaKnown RBP34.01■■■■□ 3.03
PSME3-204ENST00000543428 ZNF644Q9H582 1327 aaPredicted RBP34.01■■■■□ 3.03
PSME3-204ENST00000543428 NCOA2Q15596 1464 aa34■■■■□ 3.03
PSME3-204ENST00000543428 ATP7AQ04656 1500 aa33.99■■■■□ 3.03
PSME3-204ENST00000543428 CEBPAP49715 358 aaPredicted RBP33.97■■■■□ 3.03
PSME3-204ENST00000543428 INO80Q9ULG1 1556 aaPredicted RBP33.94■■■■□ 3.02
PSME3-204ENST00000543428 HSPA2P54652 639 aa33.91■■■■□ 3.02
PSME3-204ENST00000543428 LRRC9Q6ZRR7 1453 aa33.9■■■■□ 3.02
PSME3-204ENST00000543428 MBD5Q9P267 1494 aa33.88■■■■□ 3.01
PSME3-204ENST00000543428 A2MP01023 1474 aa33.88■■■■□ 3.01
PSME3-204ENST00000543428 PREX1Q8TCU6 1659 aa33.86■■■■□ 3.01
PSME3-204ENST00000543428 CAMSAP2Q08AD1 1489 aa33.85■■■■□ 3.01
PSME3-204ENST00000543428 MAP3K1Q13233 1512 aa33.84■■■■□ 3.01
PSME3-204ENST00000543428 CNTLNQ9NXG0 1405 aa33.84■■■■□ 3.01
PSME3-204ENST00000543428 C3P01024 1663 aa33.83■■■■□ 3.01
PSME3-204ENST00000543428 ADGBQ8N7X0 1667 aa33.82■■■■□ 3
PSME3-204ENST00000543428 PLXNC1O60486 1568 aa33.81■■■■□ 3
PSME3-204ENST00000543428 APLP2Q06481 763 aa33.8■■■■□ 3
PSME3-204ENST00000543428 KANK4Q5T7N3 995 aaPredicted RBP33.8■■■■□ 3
PSME3-204ENST00000543428 CCDC141Q6ZP82 1450 aa33.8■■■■□ 3
PSME3-204ENST00000543428 RTEL1-TNFRSF6BF6WH68 1400 aa33.79■■■■□ 3
PSME3-204ENST00000543428 RSPH4AQ5TD94 716 aa33.79■■■■□ 3
PSME3-204ENST00000543428 SETD1BQ9UPS6 1966 aaKnown RBP33.79■■■■□ 3
PSME3-204ENST00000543428 ILDR1Q86SU0 546 aaPredicted RBP33.78■■■■□ 3
PSME3-204ENST00000543428 UHRF1BP1Q6BDS2 1440 aa33.77■■■■□ 3
PSME3-204ENST00000543428 GGT6Q6P531 493 aa33.75■■■□□ 2.99
PSME3-204ENST00000543428 MROH2AA6NES4 1674 aa33.71■■■□□ 2.99
PSME3-204ENST00000543428 TSPY4P0CV99 314 aa33.71■■■□□ 2.99
PSME3-204ENST00000543428 TSPY10P0CW01 314 aa33.71■■■□□ 2.99
PSME3-204ENST00000543428 ARHGEF5Q12774 1597 aa33.69■■■□□ 2.98
PSME3-204ENST00000543428 ZMYM3Q14202 1370 aa33.68■■■□□ 2.98
PSME3-204ENST00000543428 DHX29Q7Z478 1369 aaKnown RBP33.68■■■□□ 2.98
PSME3-204ENST00000543428 CLTCQ00610 1675 aaKnown RBP33.68■■■□□ 2.98
PSME3-204ENST00000543428 MYOM3Q5VTT5 1437 aa33.66■■■□□ 2.98
PSME3-204ENST00000543428 PPP6R1Q9UPN7 881 aa33.64■■■□□ 2.98
PSME3-204ENST00000543428 MIA2Q96PC5 1412 aa33.63■■■□□ 2.97
PSME3-204ENST00000543428 NPATQ14207 1427 aa33.62■■■□□ 2.97
PSME3-204ENST00000543428 KIF3BO15066 747 aa33.61■■■□□ 2.97
PSME3-204ENST00000543428 DMRT2Q9Y5R5 561 aa33.55■■■□□ 2.96
PSME3-204ENST00000543428 STRCQ7RTU9 1775 aa33.52■■■□□ 2.96
PSME3-204ENST00000543428 MAST1Q9Y2H9 1570 aa33.51■■■□□ 2.96
PSME3-204ENST00000543428 FBXO41Q8TF61 875 aa33.5■■■□□ 2.95
PSME3-204ENST00000543428 PTPRKQ15262 1439 aa33.49■■■□□ 2.95
PSME3-204ENST00000543428 WASHC2CQ9Y4E1 1318 aa33.46■■■□□ 2.95
PSME3-204ENST00000543428 PTPN23Q9H3S7 1636 aa33.46■■■□□ 2.95
PSME3-204ENST00000543428 KDM5DQ9BY66 1539 aa33.45■■■□□ 2.95
PSME3-204ENST00000543428 FAM135AQ9P2D6 1515 aa33.43■■■□□ 2.94
PSME3-204ENST00000543428 MYO3AQ8NEV4 1616 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms