RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 SCAPERQ9BY12 1400 aa25.57■■□□□ 1.68
CSF1R-209ENST00000543093 PCF11O94913 1555 aaKnown RBP25.56■■□□□ 1.68
CSF1R-209ENST00000543093 POGZQ7Z3K3 1410 aa25.56■■□□□ 1.68
CSF1R-209ENST00000543093 KIF14Q15058 1648 aa25.55■■□□□ 1.68
CSF1R-209ENST00000543093 LRRIQ1Q96JM4 1722 aa25.54■■□□□ 1.68
CSF1R-209ENST00000543093 CDK11AQ9UQ88 783 aaPredicted RBP25.54■■□□□ 1.68
CSF1R-209ENST00000543093 LMTK3Q96Q04 1460 aa25.53■■□□□ 1.68
CSF1R-209ENST00000543093 EFCAB2Q5VUJ9 269 aa25.51■■□□□ 1.67
CSF1R-209ENST00000543093 FER1L4A9Z1Z3 1794 aa25.49■■□□□ 1.67
CSF1R-209ENST00000543093 TROQ12816 1431 aaPredicted RBP25.49■■□□□ 1.67
CSF1R-209ENST00000543093 PLPPR3Q6T4P5 718 aa25.49■■□□□ 1.67
CSF1R-209ENST00000543093 MLECQ14165 292 aa25.48■■□□□ 1.67
CSF1R-209ENST00000543093 CLIP1P30622 1438 aa25.46■■□□□ 1.67
CSF1R-209ENST00000543093 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
CSF1R-209ENST00000543093 ATP10AO60312 1499 aa25.44■■□□□ 1.66
CSF1R-209ENST00000543093 C9orf84Q5VXU9 1444 aa25.42■■□□□ 1.66
CSF1R-209ENST00000543093 ZNF518AQ6AHZ1 1483 aa25.4■■□□□ 1.66
CSF1R-209ENST00000543093 CDC42BPBQ9Y5S2 1711 aa25.4■■□□□ 1.66
CSF1R-209ENST00000543093 ARHGEF12Q9NZN5 1544 aa25.39■■□□□ 1.66
CSF1R-209ENST00000543093 FBXO41Q8TF61 875 aa25.39■■□□□ 1.66
CSF1R-209ENST00000543093 KDM5CP41229 1560 aa25.39■■□□□ 1.65
CSF1R-209ENST00000543093 HSPA2P54652 639 aa25.38■■□□□ 1.65
CSF1R-209ENST00000543093 CASKIN1Q8WXD9 1431 aa25.37■■□□□ 1.65
CSF1R-209ENST00000543093 CCDC18Q5T9S5 1454 aa25.36■■□□□ 1.65
CSF1R-209ENST00000543093 AFAP1Q8N556 730 aa25.36■■□□□ 1.65
CSF1R-209ENST00000543093 PREX2Q70Z35 1606 aa25.36■■□□□ 1.65
CSF1R-209ENST00000543093 MYT1LQ9UL68 1186 aa25.33■■□□□ 1.65
CSF1R-209ENST00000543093 DIP2CQ9Y2E4 1556 aa25.32■■□□□ 1.64
CSF1R-209ENST00000543093 ABCA6Q8N139 1617 aa25.3■■□□□ 1.64
CSF1R-209ENST00000543093 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
CSF1R-209ENST00000543093 ABCC1P33527 1531 aa25.29■■□□□ 1.64
CSF1R-209ENST00000543093 PREX1Q8TCU6 1659 aa25.29■■□□□ 1.64
CSF1R-209ENST00000543093 CDC42BPAQ5VT25 1732 aa25.29■■□□□ 1.64
CSF1R-209ENST00000543093 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
CSF1R-209ENST00000543093 FYCO1Q9BQS8 1478 aa25.27■■□□□ 1.64
CSF1R-209ENST00000543093 MLH3Q9UHC1 1453 aa25.27■■□□□ 1.64
CSF1R-209ENST00000543093 CEBPAP49715 358 aaPredicted RBP25.26■■□□□ 1.63
CSF1R-209ENST00000543093 TRAPPC8Q9Y2L5 1435 aa25.26■■□□□ 1.63
CSF1R-209ENST00000543093 KIDINS220Q9ULH0 1771 aa25.2■■□□□ 1.62
CSF1R-209ENST00000543093 AGLP35573 1532 aa25.17■■□□□ 1.62
CSF1R-209ENST00000543093 C3P01024 1663 aa25.17■■□□□ 1.62
CSF1R-209ENST00000543093 SAMD9LQ8IVG5 1584 aa25.16■■□□□ 1.62
CSF1R-209ENST00000543093 ZNF777Q9ULD5 760 aaPredicted RBP25.15■■□□□ 1.62
CSF1R-209ENST00000543093 SETD1BQ9UPS6 1966 aaKnown RBP25.14■■□□□ 1.61
CSF1R-209ENST00000543093 UHRF1BP1Q6BDS2 1440 aa25.13■■□□□ 1.61
CSF1R-209ENST00000543093 GPATCH8Q9UKJ3 1502 aaKnown RBP25.13■■□□□ 1.61
CSF1R-209ENST00000543093 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
CSF1R-209ENST00000543093 STRCQ7RTU9 1775 aa25.12■■□□□ 1.61
CSF1R-209ENST00000543093 ESF1Q9H501 851 aaKnown RBP25.11■■□□□ 1.61
CSF1R-209ENST00000543093 CERKQ8TCT0 537 aa25.1■■□□□ 1.61
CSF1R-209ENST00000543093 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.6
CSF1R-209ENST00000543093 SPAG9O60271 1321 aaKnown RBP25.06■■□□□ 1.6
CSF1R-209ENST00000543093 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
CSF1R-209ENST00000543093 CNTLNQ9NXG0 1405 aa25.04■■□□□ 1.6
CSF1R-209ENST00000543093 CCNB3Q8WWL7 1395 aa25.04■■□□□ 1.6
CSF1R-209ENST00000543093 ATP7AQ04656 1500 aa25.03■■□□□ 1.6
CSF1R-209ENST00000543093 CFDP1Q9UEE9 299 aaPredicted RBP25.03■■□□□ 1.6
CSF1R-209ENST00000543093 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
CSF1R-209ENST00000543093 PLEKHH2Q8IVE3 1493 aa25.02■■□□□ 1.6
CSF1R-209ENST00000543093 MTUS2Q5JR59 1369 aa25.02■■□□□ 1.6
CSF1R-209ENST00000543093 KIAA1107Q9UPP5 1409 aa25.02■■□□□ 1.6
CSF1R-209ENST00000543093 INO80Q9ULG1 1556 aaPredicted RBP25.01■■□□□ 1.59
CSF1R-209ENST00000543093 MROH2AA6NES4 1674 aa25.01■■□□□ 1.59
CSF1R-209ENST00000543093 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
CSF1R-209ENST00000543093 TIAM1Q13009 1591 aa24.97■■□□□ 1.59
CSF1R-209ENST00000543093 A2MP01023 1474 aa24.96■■□□□ 1.59
CSF1R-209ENST00000543093 CLTCQ00610 1675 aaKnown RBP24.95■■□□□ 1.58
CSF1R-209ENST00000543093 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.58
CSF1R-209ENST00000543093 PTPRTO14522 1441 aa24.94■■□□□ 1.58
CSF1R-209ENST00000543093 ZMYM3Q14202 1370 aa24.93■■□□□ 1.58
CSF1R-209ENST00000543093 ADGBQ8N7X0 1667 aa24.92■■□□□ 1.58
CSF1R-209ENST00000543093 NPATQ14207 1427 aa24.92■■□□□ 1.58
CSF1R-209ENST00000543093 ZNF644Q9H582 1327 aaPredicted RBP24.9■■□□□ 1.58
CSF1R-209ENST00000543093 NCOA1Q15788 1441 aa24.9■■□□□ 1.58
CSF1R-209ENST00000543093 CEP162Q5TB80 1403 aa24.89■■□□□ 1.58
CSF1R-209ENST00000543093 CAMSAP1Q5T5Y3 1602 aa24.87■■□□□ 1.57
CSF1R-209ENST00000543093 MBD5Q9P267 1494 aa24.86■■□□□ 1.57
CSF1R-209ENST00000543093 GGT6Q6P531 493 aa24.86■■□□□ 1.57
CSF1R-209ENST00000543093 MYO3AQ8NEV4 1616 aa24.85■■□□□ 1.57
CSF1R-209ENST00000543093 ZNF142P52746 1687 aaPredicted RBP24.83■■□□□ 1.57
CSF1R-209ENST00000543093 LTBP4Q8N2S1 1624 aa24.82■■□□□ 1.56
CSF1R-209ENST00000543093 PTPRKQ15262 1439 aa24.81■■□□□ 1.56
CSF1R-209ENST00000543093 RTEL1-TNFRSF6BF6WH68 1400 aa24.8■■□□□ 1.56
CSF1R-209ENST00000543093 NCOA2Q15596 1464 aa24.79■■□□□ 1.56
CSF1R-209ENST00000543093 CEP170BQ9Y4F5 1589 aaPredicted RBP24.79■■□□□ 1.56
CSF1R-209ENST00000543093 PPP6R1Q9UPN7 881 aa24.77■■□□□ 1.56
CSF1R-209ENST00000543093 NCKAP5LQ9HCH0 1330 aa24.77■■□□□ 1.56
CSF1R-209ENST00000543093 CAMSAP2Q08AD1 1489 aa24.77■■□□□ 1.56
CSF1R-209ENST00000543093 CCDC141Q6ZP82 1450 aa24.76■■□□□ 1.55
CSF1R-209ENST00000543093 DHX29Q7Z478 1369 aaKnown RBP24.75■■□□□ 1.55
CSF1R-209ENST00000543093 PLA2R1Q13018 1463 aa24.73■■□□□ 1.55
CSF1R-209ENST00000543093 IQSEC2Q5JU85 1478 aa24.72■■□□□ 1.55
CSF1R-209ENST00000543093 KIF3BO15066 747 aa24.69■■□□□ 1.54
CSF1R-209ENST00000543093 PKD2Q13563 968 aa24.69■■□□□ 1.54
CSF1R-209ENST00000543093 TCOF1Q13428 1488 aaKnown RBP24.69■■□□□ 1.54
CSF1R-209ENST00000543093 RSPH4AQ5TD94 716 aa24.68■■□□□ 1.54
CSF1R-209ENST00000543093 ARHGEF5Q12774 1597 aa24.67■■□□□ 1.54
CSF1R-209ENST00000543093 ZNF335Q9H4Z2 1342 aaPredicted RBP24.67■■□□□ 1.54
CSF1R-209ENST00000543093 A2ML1A8K2U0 1454 aa24.67■■□□□ 1.54
CSF1R-209ENST00000543093 DNMT1P26358 1616 aaKnown RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms