RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 DNAJC5Q9H3Z4 198 aa8.97□□□□□ -0.97
MRPL48-211ENST00000543058 POTEB3A0JP26 581 aa8.96□□□□□ -0.98
MRPL48-211ENST00000543058 KIF3CO14782 793 aa8.96□□□□□ -0.98
MRPL48-211ENST00000543058 POTEBQ6S5H4 581 aa8.96□□□□□ -0.98
MRPL48-211ENST00000543058 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
MRPL48-211ENST00000543058 HS3ST6Q96QI5 342 aa8.93□□□□□ -0.98
MRPL48-211ENST00000543058 RIMBP2O15034 1052 aa8.92□□□□□ -0.98
MRPL48-211ENST00000543058 GPR153Q6NV75 609 aa8.91□□□□□ -0.98
MRPL48-211ENST00000543058 ZNF710Q8N1W2 664 aa8.91□□□□□ -0.98
MRPL48-211ENST00000543058 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.98
MRPL48-211ENST00000543058 FAM205CA6NFA0 338 aa8.89□□□□□ -0.99
MRPL48-211ENST00000543058 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
MRPL48-211ENST00000543058 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
MRPL48-211ENST00000543058 PPP1R37O75864 691 aa8.87□□□□□ -0.99
MRPL48-211ENST00000543058 SPNS2Q8IVW8 549 aa8.87□□□□□ -0.99
MRPL48-211ENST00000543058 C2orf72A6NCS6 295 aa8.86□□□□□ -0.99
MRPL48-211ENST00000543058 SLC34A2O95436 690 aa8.86□□□□□ -0.99
MRPL48-211ENST00000543058 NKX1-1Q15270 411 aaPredicted RBP8.83□□□□□ -1
MRPL48-211ENST00000543058 CHGAP10645 457 aaKnown RBP8.82□□□□□ -1
MRPL48-211ENST00000543058 MMRN1Q13201 1228 aa8.82□□□□□ -1
MRPL48-211ENST00000543058 ERBB3P21860 1342 aa8.81□□□□□ -1
MRPL48-211ENST00000543058 ARSIQ5FYB1 569 aa8.79□□□□□ -1
MRPL48-211ENST00000543058 VARS2Q5ST30 1063 aaKnown RBP8.79□□□□□ -1
MRPL48-211ENST00000543058 ZNF687Q8N1G0 1237 aa8.79□□□□□ -1
MRPL48-211ENST00000543058 TMC2Q8TDI7 906 aa8.79□□□□□ -1
MRPL48-211ENST00000543058 RYDENQ9NUL5 291 aaKnown RBP8.79□□□□□ -1
MRPL48-211ENST00000543058 FOXK1P85037 733 aa8.77□□□□□ -1.01
MRPL48-211ENST00000543058 GPHNQ9NQX3 736 aaPredicted RBP8.76□□□□□ -1.01
MRPL48-211ENST00000543058 KDM4FA0A1W2PPD8 638 aa8.75□□□□□ -1.01
MRPL48-211ENST00000543058 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
MRPL48-211ENST00000543058 PTCD2Q8WV60 388 aaKnown RBP8.74□□□□□ -1.01
MRPL48-211ENST00000543058 KHSRPQ92945 711 aaKnown RBP eCLIP8.74□□□□□ -1.01
MRPL48-211ENST00000543058 PCDHGA4Q9Y5G9 962 aa8.74□□□□□ -1.01
MRPL48-211ENST00000543058 CRISPLD2Q9H0B8 497 aa8.71□□□□□ -1.02
MRPL48-211ENST00000543058 GTPBP6O43824 516 aaPredicted RBP8.7□□□□□ -1.02
MRPL48-211ENST00000543058 SLC24A1O60721 1099 aa8.69□□□□□ -1.02
MRPL48-211ENST00000543058 NUDT7P0C024 238 aa8.69□□□□□ -1.02
MRPL48-211ENST00000543058 DSG2Q14126 1118 aa8.69□□□□□ -1.02
MRPL48-211ENST00000543058 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
MRPL48-211ENST00000543058 PBX2P40425 430 aa8.67□□□□□ -1.02
MRPL48-211ENST00000543058 LHX6Q9UPM6 363 aa8.67□□□□□ -1.02
MRPL48-211ENST00000543058 PSDA5PKW4 1024 aaPredicted RBP8.65□□□□□ -1.02
MRPL48-211ENST00000543058 PTGER2P43116 358 aa8.65□□□□□ -1.02
MRPL48-211ENST00000543058 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
MRPL48-211ENST00000543058 POTEEQ6S8J3 1075 aa8.64□□□□□ -1.03
MRPL48-211ENST00000543058 OXER1Q8TDS5 423 aa8.63□□□□□ -1.03
MRPL48-211ENST00000543058 LSM11P83369 360 aaKnown RBP eCLIP8.62□□□□□ -1.03
MRPL48-211ENST00000543058 TBC1D12O60347 775 aa8.6□□□□□ -1.03
MRPL48-211ENST00000543058 MFSD10Q14728 455 aa8.6□□□□□ -1.03
MRPL48-211ENST00000543058 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
MRPL48-211ENST00000543058 PDE4AP27815 886 aa8.59□□□□□ -1.03
MRPL48-211ENST00000543058 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
MRPL48-211ENST00000543058 MYT1LQ9UL68 1186 aa8.58□□□□□ -1.04
MRPL48-211ENST00000543058 ARHGAP33O14559 1287 aa8.56□□□□□ -1.04
MRPL48-211ENST00000543058 ANO8Q9HCE9 1232 aaPredicted RBP8.55□□□□□ -1.04
MRPL48-211ENST00000543058 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
MRPL48-211ENST00000543058 TK2O00142 265 aa8.53□□□□□ -1.04
MRPL48-211ENST00000543058 PPP4R3BQ5MIZ7 849 aa8.53□□□□□ -1.04
MRPL48-211ENST00000543058 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
MRPL48-211ENST00000543058 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
MRPL48-211ENST00000543058 DCAF8L2P0C7V8 631 aa8.51□□□□□ -1.05
MRPL48-211ENST00000543058 CADPS2Q86UW7 1296 aa8.51□□□□□ -1.05
MRPL48-211ENST00000543058 BBXQ8WY36 941 aaPredicted RBP8.51□□□□□ -1.05
MRPL48-211ENST00000543058 LARP6Q9BRS8 491 aaKnown RBP8.51□□□□□ -1.05
MRPL48-211ENST00000543058 ADGRD1Q6QNK2 874 aa8.5□□□□□ -1.05
MRPL48-211ENST00000543058 HRO43593 1189 aa8.49□□□□□ -1.05
MRPL48-211ENST00000543058 FOSBP53539 338 aa8.49□□□□□ -1.05
MRPL48-211ENST00000543058 UPF1Q92900 1129 aaKnown RBP eCLIP8.49□□□□□ -1.05
MRPL48-211ENST00000543058 CAMK2BQ13554 666 aa8.48□□□□□ -1.05
MRPL48-211ENST00000543058 JPH4Q96JJ6 628 aa8.48□□□□□ -1.05
MRPL48-211ENST00000543058 BCL2L12Q9HB09 334 aa8.48□□□□□ -1.05
MRPL48-211ENST00000543058 DMRTA1Q5VZB9 504 aa8.47□□□□□ -1.05
MRPL48-211ENST00000543058 SLC4A5Q9BY07 1137 aa8.47□□□□□ -1.05
MRPL48-211ENST00000543058 EMILIN3Q9NT22 766 aa8.47□□□□□ -1.05
MRPL48-211ENST00000543058 PSEN2P49810 448 aa8.46□□□□□ -1.06
MRPL48-211ENST00000543058 EVI5O60447 810 aa8.45□□□□□ -1.06
MRPL48-211ENST00000543058 ZNF454Q8N9F8 522 aa8.44□□□□□ -1.06
MRPL48-211ENST00000543058 KCNK17Q96T54 332 aa8.41□□□□□ -1.06
MRPL48-211ENST00000543058 VPS9D1Q9Y2B5 631 aa8.41□□□□□ -1.06
MRPL48-211ENST00000543058 MAP3K9P80192 1104 aa8.4□□□□□ -1.06
MRPL48-211ENST00000543058 ZDHHC16Q969W1 377 aa8.4□□□□□ -1.06
MRPL48-211ENST00000543058 KCNH8Q96L42 1107 aa8.4□□□□□ -1.06
MRPL48-211ENST00000543058 BHMG1C9JSJ3 638 aaPredicted RBP8.38□□□□□ -1.07
MRPL48-211ENST00000543058 PTPREP23469 700 aa8.38□□□□□ -1.07
MRPL48-211ENST00000543058 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
MRPL48-211ENST00000543058 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
MRPL48-211ENST00000543058 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
MRPL48-211ENST00000543058 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
MRPL48-211ENST00000543058 PCDHGA10Q9Y5H3 936 aa8.37□□□□□ -1.07
MRPL48-211ENST00000543058 PHF14O94880 888 aa8.36□□□□□ -1.07
MRPL48-211ENST00000543058 FBXW7Q969H0 707 aa8.36□□□□□ -1.07
MRPL48-211ENST00000543058 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.35□□□□□ -1.07
MRPL48-211ENST00000543058 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
MRPL48-211ENST00000543058 PPP1R3GB7ZBB8 358 aa8.33□□□□□ -1.08
MRPL48-211ENST00000543058 TYW1BQ6NUM6 668 aa8.33□□□□□ -1.08
MRPL48-211ENST00000543058 DPYSL4O14531 572 aa8.32□□□□□ -1.08
MRPL48-211ENST00000543058 EPAS1Q99814 870 aa8.32□□□□□ -1.08
MRPL48-211ENST00000543058 PDIA6Q15084 440 aa8.31□□□□□ -1.08
MRPL48-211ENST00000543058 ONECUT3O60422 494 aaPredicted RBP8.28□□□□□ -1.08
MRPL48-211ENST00000543058 COL9A1P20849 921 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms