RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 TMEM92Q6UXU6 159 aa10.24□□□□□ -0.77
MDM2-229ENST00000543046 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
MDM2-229ENST00000543046 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
MDM2-229ENST00000543046 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
MDM2-229ENST00000543046 PDE4AP27815 886 aa10.22□□□□□ -0.77
MDM2-229ENST00000543046 TMC2Q8TDI7 906 aa10.22□□□□□ -0.77
MDM2-229ENST00000543046 OTUD5Q96G74 571 aa10.21□□□□□ -0.77
MDM2-229ENST00000543046 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.77
MDM2-229ENST00000543046 C2orf72A6NCS6 295 aa10.2□□□□□ -0.78
MDM2-229ENST00000543046 KIF3CO14782 793 aa10.2□□□□□ -0.78
MDM2-229ENST00000543046 VSIG10Q8N0Z9 540 aa10.19□□□□□ -0.78
MDM2-229ENST00000543046 SLAIN1Q8ND83 568 aa10.19□□□□□ -0.78
MDM2-229ENST00000543046 LARP6Q9BRS8 491 aaKnown RBP10.19□□□□□ -0.78
MDM2-229ENST00000543046 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
MDM2-229ENST00000543046 MFSD10Q14728 455 aa10.16□□□□□ -0.78
MDM2-229ENST00000543046 DDX27Q96GQ7 796 aaKnown RBP10.15□□□□□ -0.78
MDM2-229ENST00000543046 FOXK1P85037 733 aa10.14□□□□□ -0.79
MDM2-229ENST00000543046 DSG2Q14126 1118 aa10.14□□□□□ -0.79
MDM2-229ENST00000543046 WDR70Q9NW82 654 aa10.14□□□□□ -0.79
MDM2-229ENST00000543046 PPP1R15BQ5SWA1 713 aa10.13□□□□□ -0.79
MDM2-229ENST00000543046 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
MDM2-229ENST00000543046 E2F4Q16254 413 aa10.05□□□□□ -0.8
MDM2-229ENST00000543046 CAMK2BQ13554 666 aa10.03□□□□□ -0.8
MDM2-229ENST00000543046 SNPHO15079 494 aa10.02□□□□□ -0.81
MDM2-229ENST00000543046 HOXB3P14651 431 aaPredicted RBP10.02□□□□□ -0.81
MDM2-229ENST00000543046 DOK7Q18PE1 504 aa10.02□□□□□ -0.81
MDM2-229ENST00000543046 SLC34A2O95436 690 aa10□□□□□ -0.81
MDM2-229ENST00000543046 KCNV2Q8TDN2 545 aa10□□□□□ -0.81
MDM2-229ENST00000543046 EMILIN3Q9NT22 766 aa10□□□□□ -0.81
MDM2-229ENST00000543046 P3H3Q8IVL6 736 aa9.99□□□□□ -0.81
MDM2-229ENST00000543046 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
MDM2-229ENST00000543046 UPF1Q92900 1129 aaKnown RBP eCLIP9.98□□□□□ -0.81
MDM2-229ENST00000543046 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
MDM2-229ENST00000543046 ZNF710Q8N1W2 664 aa9.97□□□□□ -0.81
MDM2-229ENST00000543046 OXER1Q8TDS5 423 aa9.97□□□□□ -0.81
MDM2-229ENST00000543046 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
MDM2-229ENST00000543046 DPYSL4O14531 572 aa9.94□□□□□ -0.82
MDM2-229ENST00000543046 TBC1D12O60347 775 aa9.94□□□□□ -0.82
MDM2-229ENST00000543046 ARHGEF1Q92888 912 aaKnown RBP9.94□□□□□ -0.82
MDM2-229ENST00000543046 ARIH1Q9Y4X5 557 aaPredicted RBP9.94□□□□□ -0.82
MDM2-229ENST00000543046 PCDHGA4Q9Y5G9 962 aa9.94□□□□□ -0.82
MDM2-229ENST00000543046 MAP3K9P80192 1104 aa9.93□□□□□ -0.82
MDM2-229ENST00000543046 GPR153Q6NV75 609 aa9.92□□□□□ -0.82
MDM2-229ENST00000543046 ARSIQ5FYB1 569 aa9.91□□□□□ -0.82
MDM2-229ENST00000543046 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.824e-14■■■■□ 26.7
MDM2-229ENST00000543046 FAM163AQ96GL9 167 aaPredicted RBP9.9□□□□□ -0.82
MDM2-229ENST00000543046 ST18O60284 1047 aa9.89□□□□□ -0.83
MDM2-229ENST00000543046 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
MDM2-229ENST00000543046 NUDT7P0C024 238 aa9.88□□□□□ -0.83
MDM2-229ENST00000543046 EVI5O60447 810 aa9.87□□□□□ -0.83
MDM2-229ENST00000543046 PDIA6Q15084 440 aa9.87□□□□□ -0.83
MDM2-229ENST00000543046 KDM4FA0A1W2PPD8 638 aa9.85□□□□□ -0.83
MDM2-229ENST00000543046 ZNF316A6NFI3 1004 aaPredicted RBP9.85□□□□□ -0.83
MDM2-229ENST00000543046 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
MDM2-229ENST00000543046 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
MDM2-229ENST00000543046 ANO8Q9HCE9 1232 aaPredicted RBP9.83□□□□□ -0.84
MDM2-229ENST00000543046 NBR1Q14596 966 aa9.81□□□□□ -0.84
MDM2-229ENST00000543046 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
MDM2-229ENST00000543046 SEMA3EO15041 775 aa9.8□□□□□ -0.84
MDM2-229ENST00000543046 LHX6Q9UPM6 363 aa9.8□□□□□ -0.84
MDM2-229ENST00000543046 EMP3P54852 163 aa9.79□□□□□ -0.84
MDM2-229ENST00000543046 PTGER2P43116 358 aa9.77□□□□□ -0.85
MDM2-229ENST00000543046 MLLT3P42568 568 aaPredicted RBP9.76□□□□□ -0.85
MDM2-229ENST00000543046 DDX12PQ92771 950 aa9.76□□□□□ -0.85
MDM2-229ENST00000543046 ERBB3P21860 1342 aa9.76□□□□□ -0.85
MDM2-229ENST00000543046 TESPA1A2RU30 521 aaPredicted RBP9.75□□□□□ -0.85
MDM2-229ENST00000543046 BCANQ96GW7 911 aa9.75□□□□□ -0.85
MDM2-229ENST00000543046 PSDA5PKW4 1024 aaPredicted RBP9.74□□□□□ -0.85
MDM2-229ENST00000543046 FAM205CA6NFA0 338 aa9.74□□□□□ -0.85
MDM2-229ENST00000543046 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
MDM2-229ENST00000543046 ZNF454Q8N9F8 522 aa9.74□□□□□ -0.85
MDM2-229ENST00000543046 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
MDM2-229ENST00000543046 PHF14O94880 888 aa9.73□□□□□ -0.85
MDM2-229ENST00000543046 FOSBP53539 338 aa9.73□□□□□ -0.85
MDM2-229ENST00000543046 VARS2Q5ST30 1063 aaKnown RBP9.72□□□□□ -0.85
MDM2-229ENST00000543046 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
MDM2-229ENST00000543046 PPP4R3BQ5MIZ7 849 aa9.7□□□□□ -0.86
MDM2-229ENST00000543046 SMYD5Q6GMV2 418 aa9.7□□□□□ -0.86
MDM2-229ENST00000543046 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
MDM2-229ENST00000543046 EPAS1Q99814 870 aa9.7□□□□□ -0.86
MDM2-229ENST00000543046 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
MDM2-229ENST00000543046 POTEB3A0JP26 581 aa9.68□□□□□ -0.86
MDM2-229ENST00000543046 OSBPP22059 807 aa9.68□□□□□ -0.86
MDM2-229ENST00000543046 POTEBQ6S5H4 581 aa9.68□□□□□ -0.86
MDM2-229ENST00000543046 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
MDM2-229ENST00000543046 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
MDM2-229ENST00000543046 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
MDM2-229ENST00000543046 POTEMA6NI47 508 aa9.66□□□□□ -0.86
MDM2-229ENST00000543046 POTEGQ6S5H5 508 aa9.66□□□□□ -0.86
MDM2-229ENST00000543046 PRIM1P49642 420 aaKnown RBP9.65□□□□□ -0.86
MDM2-229ENST00000543046 EN1Q05925 392 aaPredicted RBP9.65□□□□□ -0.86
MDM2-229ENST00000543046 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
MDM2-229ENST00000543046 RBM33Q96EV2 1170 aaKnown RBP9.65□□□□□ -0.86
MDM2-229ENST00000543046 ADAM33Q9BZ11 813 aa9.65□□□□□ -0.86
MDM2-229ENST00000543046 MAP3K7O43318 606 aa9.63□□□□□ -0.87
MDM2-229ENST00000543046 BCL2L12Q9HB09 334 aa9.63□□□□□ -0.87
MDM2-229ENST00000543046 RBM26Q5T8P6 1007 aaKnown RBP9.62□□□□□ -0.87
MDM2-229ENST00000543046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.62□□□□□ -0.87
MDM2-229ENST00000543046 TSR1Q2NL82 804 aaKnown RBP9.61□□□□□ -0.87
MDM2-229ENST00000543046 PTPREP23469 700 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms