RNA–Protein interactions for RNA: ENST00000542766.5

IFT43-203, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-203ENST00000542766 SCAPERQ9BY12 1400 aa34.18■■■■□ 3.06
IFT43-203ENST00000542766 ZFYVE16Q7Z3T8 1539 aa34.18■■■■□ 3.06
IFT43-203ENST00000542766 RIMS1Q86UR5 1692 aaKnown RBP34.16■■■■□ 3.06
IFT43-203ENST00000542766 POGZQ7Z3K3 1410 aa34.15■■■■□ 3.06
IFT43-203ENST00000542766 CDK11AQ9UQ88 783 aaPredicted RBP34.14■■■■□ 3.06
IFT43-203ENST00000542766 CDC42BPBQ9Y5S2 1711 aa34.12■■■■□ 3.05
IFT43-203ENST00000542766 MAGI2Q86UL8 1455 aa34.11■■■■□ 3.05
IFT43-203ENST00000542766 CASKIN1Q8WXD9 1431 aa34.09■■■■□ 3.05
IFT43-203ENST00000542766 EFCAB2Q5VUJ9 269 aa34.07■■■■□ 3.04
IFT43-203ENST00000542766 CLIP1P30622 1438 aa34.06■■■■□ 3.04
IFT43-203ENST00000542766 ARHGAP5Q13017 1502 aa34.05■■■■□ 3.04
IFT43-203ENST00000542766 ILDR1Q86SU0 546 aaPredicted RBP34.02■■■■□ 3.04
IFT43-203ENST00000542766 CCDC18Q5T9S5 1454 aa34.01■■■■□ 3.04
IFT43-203ENST00000542766 PREX2Q70Z35 1606 aa34.01■■■■□ 3.03
IFT43-203ENST00000542766 FER1L4A9Z1Z3 1794 aa34■■■■□ 3.03
IFT43-203ENST00000542766 KDM5CP41229 1560 aa33.98■■■■□ 3.03
IFT43-203ENST00000542766 CDC42BPAQ5VT25 1732 aa33.97■■■■□ 3.03
IFT43-203ENST00000542766 FYCO1Q9BQS8 1478 aa33.96■■■■□ 3.03
IFT43-203ENST00000542766 ATP10AO60312 1499 aa33.95■■■■□ 3.03
IFT43-203ENST00000542766 ZNF518AQ6AHZ1 1483 aa33.95■■■■□ 3.02
IFT43-203ENST00000542766 LMTK3Q96Q04 1460 aa33.95■■■■□ 3.02
IFT43-203ENST00000542766 MLECQ14165 292 aa33.93■■■■□ 3.02
IFT43-203ENST00000542766 AFAP1Q8N556 730 aa33.93■■■■□ 3.02
IFT43-203ENST00000542766 C9orf84Q5VXU9 1444 aa33.91■■■■□ 3.02
IFT43-203ENST00000542766 ITSN2Q9NZM3 1697 aa33.9■■■■□ 3.02
IFT43-203ENST00000542766 ARHGEF12Q9NZN5 1544 aa33.89■■■■□ 3.02
IFT43-203ENST00000542766 ABCC1P33527 1531 aa33.89■■■■□ 3.02
IFT43-203ENST00000542766 DIP2CQ9Y2E4 1556 aa33.88■■■■□ 3.01
IFT43-203ENST00000542766 PLPPR3Q6T4P5 718 aa33.86■■■■□ 3.01
IFT43-203ENST00000542766 ABCA6Q8N139 1617 aa33.86■■■■□ 3.01
IFT43-203ENST00000542766 TRAPPC8Q9Y2L5 1435 aa33.84■■■■□ 3.01
IFT43-203ENST00000542766 MLH3Q9UHC1 1453 aa33.79■■■■□ 3
IFT43-203ENST00000542766 KIDINS220Q9ULH0 1771 aa33.78■■■■□ 3
IFT43-203ENST00000542766 SAMD9LQ8IVG5 1584 aa33.77■■■■□ 3
IFT43-203ENST00000542766 REREQ9P2R6 1566 aa33.77■■■■□ 3
IFT43-203ENST00000542766 HSPA2P54652 639 aa33.74■■■□□ 2.99
IFT43-203ENST00000542766 GPATCH8Q9UKJ3 1502 aaKnown RBP33.74■■■□□ 2.99
IFT43-203ENST00000542766 MYT1LQ9UL68 1186 aa33.73■■■□□ 2.99
IFT43-203ENST00000542766 CEBPAP49715 358 aaPredicted RBP33.68■■■□□ 2.98
IFT43-203ENST00000542766 SYCP2Q9BX26 1530 aa33.68■■■□□ 2.98
IFT43-203ENST00000542766 PREX1Q8TCU6 1659 aa33.67■■■□□ 2.98
IFT43-203ENST00000542766 ZNF777Q9ULD5 760 aaPredicted RBP33.65■■■□□ 2.98
IFT43-203ENST00000542766 AGLP35573 1532 aa33.64■■■□□ 2.98
IFT43-203ENST00000542766 SETD1BQ9UPS6 1966 aaKnown RBP33.62■■■□□ 2.97
IFT43-203ENST00000542766 CEP162Q5TB80 1403 aa33.62■■■□□ 2.97
IFT43-203ENST00000542766 C3P01024 1663 aa33.61■■■□□ 2.97
IFT43-203ENST00000542766 HNRNPMP52272 730 aaKnown RBP eCLIP33.58■■■□□ 2.97
IFT43-203ENST00000542766 MTUS2Q5JR59 1369 aa33.58■■■□□ 2.97
IFT43-203ENST00000542766 TIAM1Q13009 1591 aa33.56■■■□□ 2.96
IFT43-203ENST00000542766 CCNB3Q8WWL7 1395 aa33.55■■■□□ 2.96
IFT43-203ENST00000542766 EHBP1L1Q8N3D4 1523 aa33.53■■■□□ 2.96
IFT43-203ENST00000542766 SUPT6HQ7KZ85 1726 aaKnown RBP33.53■■■□□ 2.96
IFT43-203ENST00000542766 INO80Q9ULG1 1556 aaPredicted RBP33.53■■■□□ 2.96
IFT43-203ENST00000542766 CFDP1Q9UEE9 299 aaPredicted RBP33.53■■■□□ 2.96
IFT43-203ENST00000542766 KIAA1107Q9UPP5 1409 aa33.52■■■□□ 2.96
IFT43-203ENST00000542766 ATP7AQ04656 1500 aa33.51■■■□□ 2.95
IFT43-203ENST00000542766 STRCQ7RTU9 1775 aa33.49■■■□□ 2.95
IFT43-203ENST00000542766 SPAG9O60271 1321 aaKnown RBP33.49■■■□□ 2.95
IFT43-203ENST00000542766 FBXO41Q8TF61 875 aa33.48■■■□□ 2.95
IFT43-203ENST00000542766 PLEKHH2Q8IVE3 1493 aa33.48■■■□□ 2.95
IFT43-203ENST00000542766 ZNF644Q9H582 1327 aaPredicted RBP33.46■■■□□ 2.95
IFT43-203ENST00000542766 PLXNC1O60486 1568 aa33.44■■■□□ 2.94
IFT43-203ENST00000542766 UHRF1BP1Q6BDS2 1440 aa33.42■■■□□ 2.94
IFT43-203ENST00000542766 MROH2AA6NES4 1674 aa33.41■■■□□ 2.94
IFT43-203ENST00000542766 MBD5Q9P267 1494 aa33.39■■■□□ 2.94
IFT43-203ENST00000542766 A2MP01023 1474 aa33.37■■■□□ 2.93
IFT43-203ENST00000542766 ADGBQ8N7X0 1667 aa33.37■■■□□ 2.93
IFT43-203ENST00000542766 LOC105371045A0A1W2PR82 267 aa33.37■■■□□ 2.93
IFT43-203ENST00000542766 CNTLNQ9NXG0 1405 aa33.36■■■□□ 2.93
IFT43-203ENST00000542766 CLTCQ00610 1675 aaKnown RBP33.36■■■□□ 2.93
IFT43-203ENST00000542766 ESF1Q9H501 851 aaKnown RBP33.36■■■□□ 2.93
IFT43-203ENST00000542766 NCOA2Q15596 1464 aa33.34■■■□□ 2.93
IFT43-203ENST00000542766 ZMYM3Q14202 1370 aa33.27■■■□□ 2.92
IFT43-203ENST00000542766 CAMSAP2Q08AD1 1489 aa33.25■■■□□ 2.91
IFT43-203ENST00000542766 VPS8Q8N3P4 1428 aa33.25■■■□□ 2.91
IFT43-203ENST00000542766 CERKQ8TCT0 537 aa33.23■■■□□ 2.91
IFT43-203ENST00000542766 RTEL1-TNFRSF6BF6WH68 1400 aa33.22■■■□□ 2.91
IFT43-203ENST00000542766 NPATQ14207 1427 aa33.22■■■□□ 2.91
IFT43-203ENST00000542766 GGT6Q6P531 493 aa33.21■■■□□ 2.91
IFT43-203ENST00000542766 CCDC141Q6ZP82 1450 aa33.19■■■□□ 2.9
IFT43-203ENST00000542766 LRRC9Q6ZRR7 1453 aa33.18■■■□□ 2.9
IFT43-203ENST00000542766 MYO3AQ8NEV4 1616 aa33.17■■■□□ 2.9
IFT43-203ENST00000542766 NCOA1Q15788 1441 aa33.15■■■□□ 2.9
IFT43-203ENST00000542766 DMRT2Q9Y5R5 561 aa33.15■■■□□ 2.9
IFT43-203ENST00000542766 ZNF142P52746 1687 aaPredicted RBP33.14■■■□□ 2.9
IFT43-203ENST00000542766 PTPRKQ15262 1439 aa33.14■■■□□ 2.9
IFT43-203ENST00000542766 DHX29Q7Z478 1369 aaKnown RBP33.14■■■□□ 2.9
IFT43-203ENST00000542766 CAMSAP1Q5T5Y3 1602 aa33.13■■■□□ 2.89
IFT43-203ENST00000542766 ARHGEF5Q12774 1597 aa33.13■■■□□ 2.89
IFT43-203ENST00000542766 PTPRTO14522 1441 aa33.13■■■□□ 2.89
IFT43-203ENST00000542766 KANK4Q5T7N3 995 aaPredicted RBP33.1■■■□□ 2.89
IFT43-203ENST00000542766 CEP170BQ9Y4F5 1589 aaPredicted RBP33.07■■■□□ 2.88
IFT43-203ENST00000542766 MAP3K1Q13233 1512 aa33.07■■■□□ 2.88
IFT43-203ENST00000542766 PPP6R1Q9UPN7 881 aa33.05■■■□□ 2.88
IFT43-203ENST00000542766 LTBP4Q8N2S1 1624 aa33.03■■■□□ 2.88
IFT43-203ENST00000542766 RSPH4AQ5TD94 716 aa33.03■■■□□ 2.88
IFT43-203ENST00000542766 KIF3BO15066 747 aa33.02■■■□□ 2.88
IFT43-203ENST00000542766 MAST1Q9Y2H9 1570 aa32.98■■■□□ 2.87
IFT43-203ENST00000542766 NCKAP5LQ9HCH0 1330 aa32.98■■■□□ 2.87
IFT43-203ENST00000542766 KDM5DQ9BY66 1539 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms