RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TMEM92Q6UXU6 159 aa7.75□□□□□ -1.17
KNTC1-213ENST00000542727 HS3ST6Q96QI5 342 aa7.75□□□□□ -1.17
KNTC1-213ENST00000542727 FAM205CA6NFA0 338 aa7.73□□□□□ -1.17
KNTC1-213ENST00000542727 HS6ST3Q8IZP7 471 aa7.71□□□□□ -1.18
KNTC1-213ENST00000542727 ERBB3P21860 1342 aa7.7□□□□□ -1.18
KNTC1-213ENST00000542727 KIF3CO14782 793 aa7.68□□□□□ -1.18
KNTC1-213ENST00000542727 GPR153Q6NV75 609 aa7.67□□□□□ -1.18
KNTC1-213ENST00000542727 SPNS2Q8IVW8 549 aa7.67□□□□□ -1.18
KNTC1-213ENST00000542727 RYDENQ9NUL5 291 aaKnown RBP7.67□□□□□ -1.18
KNTC1-213ENST00000542727 POTEB3A0JP26 581 aa7.66□□□□□ -1.18
KNTC1-213ENST00000542727 POTEBQ6S5H4 581 aa7.66□□□□□ -1.18
KNTC1-213ENST00000542727 TMC2Q8TDI7 906 aa7.66□□□□□ -1.18
KNTC1-213ENST00000542727 DNAJC5Q9H3Z4 198 aa7.66□□□□□ -1.18
KNTC1-213ENST00000542727 C2orf72A6NCS6 295 aa7.65□□□□□ -1.18
KNTC1-213ENST00000542727 MMRN1Q13201 1228 aa7.65□□□□□ -1.18
KNTC1-213ENST00000542727 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
KNTC1-213ENST00000542727 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.18
KNTC1-213ENST00000542727 VARS2Q5ST30 1063 aaKnown RBP7.64□□□□□ -1.19
KNTC1-213ENST00000542727 SLC34A2O95436 690 aa7.63□□□□□ -1.19
KNTC1-213ENST00000542727 CHGAP10645 457 aaKnown RBP7.63□□□□□ -1.19
KNTC1-213ENST00000542727 ARSIQ5FYB1 569 aa7.61□□□□□ -1.19
KNTC1-213ENST00000542727 ZNF687Q8N1G0 1237 aa7.61□□□□□ -1.19
KNTC1-213ENST00000542727 PPP1R37O75864 691 aa7.6□□□□□ -1.19
KNTC1-213ENST00000542727 ZNF316A6NFI3 1004 aaPredicted RBP7.59□□□□□ -1.19
KNTC1-213ENST00000542727 FOXK1P85037 733 aa7.57□□□□□ -1.2
KNTC1-213ENST00000542727 GPHNQ9NQX3 736 aaPredicted RBP7.57□□□□□ -1.2
KNTC1-213ENST00000542727 PTGER2P43116 358 aa7.56□□□□□ -1.2
KNTC1-213ENST00000542727 PCDHGA4Q9Y5G9 962 aa7.56□□□□□ -1.2
KNTC1-213ENST00000542727 PSDA5PKW4 1024 aaPredicted RBP7.55□□□□□ -1.2
KNTC1-213ENST00000542727 PBX2P40425 430 aa7.54□□□□□ -1.2
KNTC1-213ENST00000542727 NUDT7P0C024 238 aa7.53□□□□□ -1.2
KNTC1-213ENST00000542727 NKX1-1Q15270 411 aaPredicted RBP7.53□□□□□ -1.2
KNTC1-213ENST00000542727 PTCD2Q8WV60 388 aaKnown RBP7.53□□□□□ -1.2
KNTC1-213ENST00000542727 KHSRPQ92945 711 aaKnown RBP eCLIP7.53□□□□□ -1.27e-7■■□□□ 14.2
KNTC1-213ENST00000542727 TBC1D12O60347 775 aa7.51□□□□□ -1.21
KNTC1-213ENST00000542727 PLPP6Q8IY26 295 aa7.51□□□□□ -1.21
KNTC1-213ENST00000542727 LHX6Q9UPM6 363 aa7.5□□□□□ -1.21
KNTC1-213ENST00000542727 DSG2Q14126 1118 aa7.49□□□□□ -1.21
KNTC1-213ENST00000542727 LSM11P83369 360 aaKnown RBP eCLIP7.48□□□□□ -1.21
KNTC1-213ENST00000542727 RNF166Q96A37 237 aaPredicted RBP7.48□□□□□ -1.21
KNTC1-213ENST00000542727 MYT1LQ9UL68 1186 aa7.48□□□□□ -1.21
KNTC1-213ENST00000542727 KDM4FA0A1W2PPD8 638 aa7.47□□□□□ -1.21
KNTC1-213ENST00000542727 CRISPLD2Q9H0B8 497 aa7.47□□□□□ -1.21
KNTC1-213ENST00000542727 PDE4AP27815 886 aa7.46□□□□□ -1.22
KNTC1-213ENST00000542727 GTPBP6O43824 516 aaPredicted RBP7.45□□□□□ -1.22
KNTC1-213ENST00000542727 DCAF8L2P0C7V8 631 aa7.45□□□□□ -1.22
KNTC1-213ENST00000542727 PPP4R3BQ5MIZ7 849 aa7.44□□□□□ -1.22
KNTC1-213ENST00000542727 PPP1R15BQ5SWA1 713 aa7.44□□□□□ -1.22
KNTC1-213ENST00000542727 ANKRD13DQ6ZTN6 518 aa7.44□□□□□ -1.22
KNTC1-213ENST00000542727 ARHGAP33O14559 1287 aa7.43□□□□□ -1.22
KNTC1-213ENST00000542727 OXER1Q8TDS5 423 aa7.42□□□□□ -1.22
KNTC1-213ENST00000542727 KCNH8Q96L42 1107 aa7.42□□□□□ -1.22
KNTC1-213ENST00000542727 NCKAP5LQ9HCH0 1330 aa7.41□□□□□ -1.22
KNTC1-213ENST00000542727 TK2O00142 265 aa7.4□□□□□ -1.22
KNTC1-213ENST00000542727 POTEEQ6S8J3 1075 aa7.39□□□□□ -1.23
KNTC1-213ENST00000542727 DDX27Q96GQ7 796 aaKnown RBP7.39□□□□□ -1.23
KNTC1-213ENST00000542727 MFSD10Q14728 455 aa7.38□□□□□ -1.23
KNTC1-213ENST00000542727 AXIN2Q9Y2T1 843 aa7.38□□□□□ -1.23
KNTC1-213ENST00000542727 ADGRD1Q6QNK2 874 aa7.37□□□□□ -1.23
KNTC1-213ENST00000542727 UPF1Q92900 1129 aaKnown RBP eCLIP7.37□□□□□ -1.23
KNTC1-213ENST00000542727 LARP6Q9BRS8 491 aaKnown RBP7.37□□□□□ -1.23
KNTC1-213ENST00000542727 AMER1Q5JTC6 1135 aaPredicted RBP7.35□□□□□ -1.23
KNTC1-213ENST00000542727 BBXQ8WY36 941 aaPredicted RBP7.34□□□□□ -1.23
KNTC1-213ENST00000542727 JPH4Q96JJ6 628 aa7.34□□□□□ -1.23
KNTC1-213ENST00000542727 ANO8Q9HCE9 1232 aaPredicted RBP7.34□□□□□ -1.23
KNTC1-213ENST00000542727 ZNF454Q8N9F8 522 aa7.33□□□□□ -1.24
KNTC1-213ENST00000542727 BCL2L12Q9HB09 334 aa7.33□□□□□ -1.24
KNTC1-213ENST00000542727 EVI5O60447 810 aa7.32□□□□□ -1.24
KNTC1-213ENST00000542727 PSEN2P49810 448 aa7.32□□□□□ -1.24
KNTC1-213ENST00000542727 FOSBP53539 338 aa7.32□□□□□ -1.24
KNTC1-213ENST00000542727 HRO43593 1189 aa7.31□□□□□ -1.24
KNTC1-213ENST00000542727 MAP3K9P80192 1104 aa7.31□□□□□ -1.24
KNTC1-213ENST00000542727 DMRTA1Q5VZB9 504 aa7.31□□□□□ -1.24
KNTC1-213ENST00000542727 STAC3Q96MF2 364 aa7.31□□□□□ -1.24
KNTC1-213ENST00000542727 KCNK17Q96T54 332 aa7.31□□□□□ -1.24
KNTC1-213ENST00000542727 SLC4A5Q9BY07 1137 aa7.31□□□□□ -1.24
KNTC1-213ENST00000542727 PTPREP23469 700 aa7.3□□□□□ -1.24
KNTC1-213ENST00000542727 HCSTQ9UBK5 93 aa7.3□□□□□ -1.24
KNTC1-213ENST00000542727 ZDHHC16Q969W1 377 aa7.28□□□□□ -1.24
KNTC1-213ENST00000542727 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.28□□□□□ -1.24
KNTC1-213ENST00000542727 CAMK2BQ13554 666 aa7.27□□□□□ -1.25
KNTC1-213ENST00000542727 CADPS2Q86UW7 1296 aa7.27□□□□□ -1.25
KNTC1-213ENST00000542727 VPS9D1Q9Y2B5 631 aa7.27□□□□□ -1.25
KNTC1-213ENST00000542727 EMILIN3Q9NT22 766 aa7.26□□□□□ -1.25
KNTC1-213ENST00000542727 SPRYD3Q8NCJ5 442 aa7.25□□□□□ -1.25
KNTC1-213ENST00000542727 FBXW7Q969H0 707 aa7.25□□□□□ -1.25
KNTC1-213ENST00000542727 PHF14O94880 888 aa7.24□□□□□ -1.25
KNTC1-213ENST00000542727 PPP1R3GB7ZBB8 358 aa7.23□□□□□ -1.25
KNTC1-213ENST00000542727 TYW1BQ6NUM6 668 aa7.23□□□□□ -1.25
KNTC1-213ENST00000542727 ZBED2Q9BTP6 218 aa7.23□□□□□ -1.25
KNTC1-213ENST00000542727 NBPF3Q9H094 633 aa7.23□□□□□ -1.25
KNTC1-213ENST00000542727 BHMG1C9JSJ3 638 aaPredicted RBP7.22□□□□□ -1.25
KNTC1-213ENST00000542727 ADAM33Q9BZ11 813 aa7.22□□□□□ -1.25
KNTC1-213ENST00000542727 PCDHGA10Q9Y5H3 936 aa7.22□□□□□ -1.25
KNTC1-213ENST00000542727 KCTD12Q96CX2 325 aaKnown RBP7.21□□□□□ -1.26
KNTC1-213ENST00000542727 EPAS1Q99814 870 aa7.21□□□□□ -1.26
KNTC1-213ENST00000542727 MRPL50Q8N5N7 158 aaKnown RBP7.2□□□□□ -1.26
KNTC1-213ENST00000542727 PLA2G2EQ9NZK7 142 aa7.2□□□□□ -1.26
KNTC1-213ENST00000542727 RTN4Q9NQC3 1192 aaKnown RBP7.19□□□□□ -1.26
KNTC1-213ENST00000542727 GOLGA8CPA6NN73 597 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms