RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
ECHDC2-223ENST00000542552 ARHGAP5Q13017 1502 aa24.66■■□□□ 1.54
ECHDC2-223ENST00000542552 CDC42BPAQ5VT25 1732 aa24.66■■□□□ 1.54
ECHDC2-223ENST00000542552 SCAPERQ9BY12 1400 aa24.65■■□□□ 1.54
ECHDC2-223ENST00000542552 ZMYM4Q5VZL5 1548 aa24.64■■□□□ 1.53
ECHDC2-223ENST00000542552 MTUS2Q5JR59 1369 aa24.63■■□□□ 1.53
ECHDC2-223ENST00000542552 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
ECHDC2-223ENST00000542552 EHBP1L1Q8N3D4 1523 aa24.6■■□□□ 1.53
ECHDC2-223ENST00000542552 GPATCH8Q9UKJ3 1502 aaKnown RBP24.6■■□□□ 1.53
ECHDC2-223ENST00000542552 ARHGEF40Q8TER5 1519 aa24.58■■□□□ 1.53
ECHDC2-223ENST00000542552 TIAM1Q13009 1591 aa24.58■■□□□ 1.52
ECHDC2-223ENST00000542552 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.52
ECHDC2-223ENST00000542552 ABCC1P33527 1531 aa24.55■■□□□ 1.52
ECHDC2-223ENST00000542552 ZNF518AQ6AHZ1 1483 aa24.54■■□□□ 1.52
ECHDC2-223ENST00000542552 MAP3K1Q13233 1512 aa24.53■■□□□ 1.52
ECHDC2-223ENST00000542552 ARHGEF12Q9NZN5 1544 aa24.53■■□□□ 1.52
ECHDC2-223ENST00000542552 KDM5CP41229 1560 aa24.53■■□□□ 1.52
ECHDC2-223ENST00000542552 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
ECHDC2-223ENST00000542552 ZFYVE16Q7Z3T8 1539 aa24.52■■□□□ 1.52
ECHDC2-223ENST00000542552 YEATS2Q9ULM3 1422 aa24.52■■□□□ 1.52
ECHDC2-223ENST00000542552 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
ECHDC2-223ENST00000542552 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
ECHDC2-223ENST00000542552 AFAP1Q8N556 730 aa24.5■■□□□ 1.51
ECHDC2-223ENST00000542552 LRRC9Q6ZRR7 1453 aa24.48■■□□□ 1.51
ECHDC2-223ENST00000542552 SUPT6HQ7KZ85 1726 aaKnown RBP24.48■■□□□ 1.51
ECHDC2-223ENST00000542552 TRAPPC8Q9Y2L5 1435 aa24.47■■□□□ 1.51
ECHDC2-223ENST00000542552 CFDP1Q9UEE9 299 aaPredicted RBP24.47■■□□□ 1.51
ECHDC2-223ENST00000542552 NCOA2Q15596 1464 aa24.46■■□□□ 1.51
ECHDC2-223ENST00000542552 MLH3Q9UHC1 1453 aa24.44■■□□□ 1.5
ECHDC2-223ENST00000542552 SIGLEC1Q9BZZ2 1709 aa24.44■■□□□ 1.5
ECHDC2-223ENST00000542552 KIAA1107Q9UPP5 1409 aa24.44■■□□□ 1.5
ECHDC2-223ENST00000542552 ADAMTSL3P82987 1691 aa24.43■■□□□ 1.5
ECHDC2-223ENST00000542552 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
ECHDC2-223ENST00000542552 ZNF777Q9ULD5 760 aaPredicted RBP24.43■■□□□ 1.5
ECHDC2-223ENST00000542552 BCORL1Q5H9F3 1711 aa24.43■■□□□ 1.5
ECHDC2-223ENST00000542552 ATP10AO60312 1499 aa24.43■■□□□ 1.5
ECHDC2-223ENST00000542552 SYCP2Q9BX26 1530 aa24.42■■□□□ 1.5
ECHDC2-223ENST00000542552 PLEKHH2Q8IVE3 1493 aa24.42■■□□□ 1.5
ECHDC2-223ENST00000542552 KANK4Q5T7N3 995 aaPredicted RBP24.4■■□□□ 1.5
ECHDC2-223ENST00000542552 ARID4BQ4LE39 1312 aaPredicted RBP24.38■■□□□ 1.49
ECHDC2-223ENST00000542552 HNRNPMP52272 730 aaKnown RBP eCLIP24.38■■□□□ 1.496e-7■□□□□ 9
ECHDC2-223ENST00000542552 DIP2CQ9Y2E4 1556 aa24.37■■□□□ 1.49
ECHDC2-223ENST00000542552 C9orf84Q5VXU9 1444 aa24.37■■□□□ 1.49
ECHDC2-223ENST00000542552 KIDINS220Q9ULH0 1771 aa24.37■■□□□ 1.49
ECHDC2-223ENST00000542552 ZNF644Q9H582 1327 aaPredicted RBP24.36■■□□□ 1.49
ECHDC2-223ENST00000542552 ABCA6Q8N139 1617 aa24.36■■□□□ 1.49
ECHDC2-223ENST00000542552 REREQ9P2R6 1566 aa24.35■■□□□ 1.49
ECHDC2-223ENST00000542552 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
ECHDC2-223ENST00000542552 MADDQ8WXG6 1647 aa24.32■■□□□ 1.48
ECHDC2-223ENST00000542552 MYT1LQ9UL68 1186 aa24.3■■□□□ 1.48
ECHDC2-223ENST00000542552 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
ECHDC2-223ENST00000542552 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
ECHDC2-223ENST00000542552 APLP2Q06481 763 aa24.29■■□□□ 1.48
ECHDC2-223ENST00000542552 PTPRMP28827 1452 aa24.29■■□□□ 1.48
ECHDC2-223ENST00000542552 CAMSAP2Q08AD1 1489 aa24.28■■□□□ 1.48
ECHDC2-223ENST00000542552 ATP7AQ04656 1500 aa24.26■■□□□ 1.47
ECHDC2-223ENST00000542552 AGLP35573 1532 aa24.25■■□□□ 1.47
ECHDC2-223ENST00000542552 MYOM3Q5VTT5 1437 aa24.25■■□□□ 1.47
ECHDC2-223ENST00000542552 RIMS1Q86UR5 1692 aaKnown RBP24.24■■□□□ 1.47
ECHDC2-223ENST00000542552 MIA2Q96PC5 1412 aa24.23■■□□□ 1.47
ECHDC2-223ENST00000542552 ARHGEF5Q12774 1597 aa24.22■■□□□ 1.47
ECHDC2-223ENST00000542552 CCDC141Q6ZP82 1450 aa24.21■■□□□ 1.47
ECHDC2-223ENST00000542552 RTEL1-TNFRSF6BF6WH68 1400 aa24.21■■□□□ 1.47
ECHDC2-223ENST00000542552 MLECQ14165 292 aa24.21■■□□□ 1.47
ECHDC2-223ENST00000542552 RSPH4AQ5TD94 716 aa24.21■■□□□ 1.47
ECHDC2-223ENST00000542552 FER1L4A9Z1Z3 1794 aa24.21■■□□□ 1.47
ECHDC2-223ENST00000542552 PLXNC1O60486 1568 aa24.18■■□□□ 1.46
ECHDC2-223ENST00000542552 ADGBQ8N7X0 1667 aa24.16■■□□□ 1.46
ECHDC2-223ENST00000542552 A2MP01023 1474 aa24.16■■□□□ 1.46
ECHDC2-223ENST00000542552 PTPN23Q9H3S7 1636 aa24.1■■□□□ 1.45
ECHDC2-223ENST00000542552 FGD6Q6ZV73 1430 aa24.1■■□□□ 1.45
ECHDC2-223ENST00000542552 MAST1Q9Y2H9 1570 aa24.09■■□□□ 1.45
ECHDC2-223ENST00000542552 DHX29Q7Z478 1369 aaKnown RBP24.08■■□□□ 1.45
ECHDC2-223ENST00000542552 TSPY4P0CV99 314 aa24.08■■□□□ 1.45
ECHDC2-223ENST00000542552 TSPY10P0CW01 314 aa24.08■■□□□ 1.45
ECHDC2-223ENST00000542552 TCOF1Q13428 1488 aaKnown RBP24.07■■□□□ 1.44
ECHDC2-223ENST00000542552 CNTLNQ9NXG0 1405 aa24.02■■□□□ 1.44
ECHDC2-223ENST00000542552 CROCC2H7BZ55 1655 aa24.01■■□□□ 1.43
ECHDC2-223ENST00000542552 C3P01024 1663 aa24.01■■□□□ 1.43
ECHDC2-223ENST00000542552 ABCC5O15440 1437 aa24.01■■□□□ 1.43
ECHDC2-223ENST00000542552 CEBPAP49715 358 aaPredicted RBP24■■□□□ 1.43
ECHDC2-223ENST00000542552 LMTK3Q96Q04 1460 aa24■■□□□ 1.43
ECHDC2-223ENST00000542552 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
ECHDC2-223ENST00000542552 MROH2AA6NES4 1674 aa23.99■■□□□ 1.43
ECHDC2-223ENST00000542552 SHANK2Q9UPX8 1470 aa23.99■■□□□ 1.43
ECHDC2-223ENST00000542552 PLPPR3Q6T4P5 718 aa23.98■■□□□ 1.43
ECHDC2-223ENST00000542552 ESF1Q9H501 851 aaKnown RBP23.98■■□□□ 1.43
ECHDC2-223ENST00000542552 PPP6R1Q9UPN7 881 aa23.97■■□□□ 1.43
ECHDC2-223ENST00000542552 DAPK1P53355 1430 aa23.96■■□□□ 1.43
ECHDC2-223ENST00000542552 GGT6Q6P531 493 aa23.96■■□□□ 1.43
ECHDC2-223ENST00000542552 CLTCQ00610 1675 aaKnown RBP23.95■■□□□ 1.42
ECHDC2-223ENST00000542552 SETD1BQ9UPS6 1966 aaKnown RBP23.94■■□□□ 1.42
ECHDC2-223ENST00000542552 KIF3BO15066 747 aa23.93■■□□□ 1.42
ECHDC2-223ENST00000542552 PREX1Q8TCU6 1659 aa23.92■■□□□ 1.42
ECHDC2-223ENST00000542552 ZMYM3Q14202 1370 aa23.92■■□□□ 1.42
ECHDC2-223ENST00000542552 DUOX2Q9NRD8 1548 aa23.9■■□□□ 1.42
ECHDC2-223ENST00000542552 EIF2AK4Q9P2K8 1649 aaKnown RBP23.9■■□□□ 1.42
ECHDC2-223ENST00000542552 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.42
ECHDC2-223ENST00000542552 RNF17Q9BXT8 1623 aaKnown RBP23.89■■□□□ 1.42
ECHDC2-223ENST00000542552 NPATQ14207 1427 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms