RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
C12orf56-205ENST00000542397 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
C12orf56-205ENST00000542397 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
C12orf56-205ENST00000542397 TMEM92Q6UXU6 159 aa11.06□□□□□ -0.64
C12orf56-205ENST00000542397 EMP3P54852 163 aa11.05□□□□□ -0.64
C12orf56-205ENST00000542397 HOXB3P14651 431 aaPredicted RBP11.01□□□□□ -0.65
C12orf56-205ENST00000542397 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
C12orf56-205ENST00000542397 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
C12orf56-205ENST00000542397 PPP1R37O75864 691 aa10.99□□□□□ -0.65
C12orf56-205ENST00000542397 ABCC9O60706 1549 aa10.99□□□□□ -0.65
C12orf56-205ENST00000542397 DOK7Q18PE1 504 aa10.98□□□□□ -0.65
C12orf56-205ENST00000542397 DCAF8L2P0C7V8 631 aa10.96□□□□□ -0.65
C12orf56-205ENST00000542397 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
C12orf56-205ENST00000542397 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
C12orf56-205ENST00000542397 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
C12orf56-205ENST00000542397 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
C12orf56-205ENST00000542397 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
C12orf56-205ENST00000542397 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
C12orf56-205ENST00000542397 KIF3CO14782 793 aa10.92□□□□□ -0.66
C12orf56-205ENST00000542397 RYDENQ9NUL5 291 aaKnown RBP10.92□□□□□ -0.66
C12orf56-205ENST00000542397 C2orf72A6NCS6 295 aa10.91□□□□□ -0.66
C12orf56-205ENST00000542397 RIMBP2O15034 1052 aa10.91□□□□□ -0.66
C12orf56-205ENST00000542397 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.66
C12orf56-205ENST00000542397 TMC2Q8TDI7 906 aa10.88□□□□□ -0.67
C12orf56-205ENST00000542397 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
C12orf56-205ENST00000542397 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
C12orf56-205ENST00000542397 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
C12orf56-205ENST00000542397 ARSIQ5FYB1 569 aa10.79□□□□□ -0.68
C12orf56-205ENST00000542397 GPHNQ9NQX3 736 aaPredicted RBP10.79□□□□□ -0.68
C12orf56-205ENST00000542397 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
C12orf56-205ENST00000542397 ERBB3P21860 1342 aa10.79□□□□□ -0.68
C12orf56-205ENST00000542397 SLC34A2O95436 690 aa10.78□□□□□ -0.68
C12orf56-205ENST00000542397 FOXK1P85037 733 aa10.77□□□□□ -0.69
C12orf56-205ENST00000542397 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
C12orf56-205ENST00000542397 PLPP6Q8IY26 295 aa10.74□□□□□ -0.69
C12orf56-205ENST00000542397 DSG2Q14126 1118 aa10.73□□□□□ -0.69
C12orf56-205ENST00000542397 VARS2Q5ST30 1063 aaKnown RBP10.73□□□□□ -0.69
C12orf56-205ENST00000542397 PCDHGA4Q9Y5G9 962 aa10.73□□□□□ -0.69
C12orf56-205ENST00000542397 CRISPLD2Q9H0B8 497 aa10.72□□□□□ -0.69
C12orf56-205ENST00000542397 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.69
C12orf56-205ENST00000542397 NUDT7P0C024 238 aa10.69□□□□□ -0.7
C12orf56-205ENST00000542397 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
C12orf56-205ENST00000542397 PDE4AP27815 886 aa10.68□□□□□ -0.7
C12orf56-205ENST00000542397 PTCD2Q8WV60 388 aaKnown RBP10.68□□□□□ -0.7
C12orf56-205ENST00000542397 NCKAP5LQ9HCH0 1330 aa10.67□□□□□ -0.7
C12orf56-205ENST00000542397 PTGER2P43116 358 aa10.66□□□□□ -0.7
C12orf56-205ENST00000542397 ZNF687Q8N1G0 1237 aa10.66□□□□□ -0.7
C12orf56-205ENST00000542397 PPP1R15BQ5SWA1 713 aa10.64□□□□□ -0.71
C12orf56-205ENST00000542397 LHX6Q9UPM6 363 aa10.63□□□□□ -0.71
C12orf56-205ENST00000542397 TBC1D12O60347 775 aa10.62□□□□□ -0.71
C12orf56-205ENST00000542397 LARP6Q9BRS8 491 aaKnown RBP10.62□□□□□ -0.71
C12orf56-205ENST00000542397 KDM4FA0A1W2PPD8 638 aa10.61□□□□□ -0.71
C12orf56-205ENST00000542397 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
C12orf56-205ENST00000542397 CADPS2Q86UW7 1296 aa10.6□□□□□ -0.71
C12orf56-205ENST00000542397 DDX27Q96GQ7 796 aaKnown RBP10.6□□□□□ -0.71
C12orf56-205ENST00000542397 MFSD10Q14728 455 aa10.59□□□□□ -0.71
C12orf56-205ENST00000542397 SPRYD3Q8NCJ5 442 aa10.59□□□□□ -0.71
C12orf56-205ENST00000542397 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
C12orf56-205ENST00000542397 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.72
C12orf56-205ENST00000542397 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
C12orf56-205ENST00000542397 PBX2P40425 430 aa10.52□□□□□ -0.73
C12orf56-205ENST00000542397 PAXIP1Q6ZW49 1069 aaPredicted RBP10.51□□□□□ -0.73
C12orf56-205ENST00000542397 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
C12orf56-205ENST00000542397 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
C12orf56-205ENST00000542397 LSM11P83369 360 aaKnown RBP eCLIP10.49□□□□□ -0.73
C12orf56-205ENST00000542397 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
C12orf56-205ENST00000542397 PPP4R3BQ5MIZ7 849 aa10.48□□□□□ -0.73
C12orf56-205ENST00000542397 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
C12orf56-205ENST00000542397 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
C12orf56-205ENST00000542397 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
C12orf56-205ENST00000542397 EMILIN3Q9NT22 766 aa10.47□□□□□ -0.73
C12orf56-205ENST00000542397 EVI5O60447 810 aa10.46□□□□□ -0.73
C12orf56-205ENST00000542397 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
C12orf56-205ENST00000542397 ANO8Q9HCE9 1232 aaPredicted RBP10.45□□□□□ -0.74
C12orf56-205ENST00000542397 CAMK2BQ13554 666 aa10.44□□□□□ -0.74
C12orf56-205ENST00000542397 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
C12orf56-205ENST00000542397 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
C12orf56-205ENST00000542397 FOSBP53539 338 aa10.41□□□□□ -0.74
C12orf56-205ENST00000542397 PSEN2P49810 448 aa10.39□□□□□ -0.75
C12orf56-205ENST00000542397 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
C12orf56-205ENST00000542397 JPH4Q96JJ6 628 aa10.38□□□□□ -0.75
C12orf56-205ENST00000542397 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
C12orf56-205ENST00000542397 KCNK17Q96T54 332 aa10.37□□□□□ -0.75
C12orf56-205ENST00000542397 BCL2L12Q9HB09 334 aa10.37□□□□□ -0.75
C12orf56-205ENST00000542397 DPYSL4O14531 572 aa10.36□□□□□ -0.75
C12orf56-205ENST00000542397 ADGRD1Q6QNK2 874 aa10.36□□□□□ -0.75
C12orf56-205ENST00000542397 TK2O00142 265 aa10.35□□□□□ -0.75
C12orf56-205ENST00000542397 ZDHHC16Q969W1 377 aa10.34□□□□□ -0.75
C12orf56-205ENST00000542397 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
C12orf56-205ENST00000542397 CCDC180Q9P1Z9 1646 aa10.33□□□□□ -0.76
C12orf56-205ENST00000542397 PTPREP23469 700 aa10.32□□□□□ -0.76
C12orf56-205ENST00000542397 ADAM33Q9BZ11 813 aa10.32□□□□□ -0.76
C12orf56-205ENST00000542397 E2F4Q16254 413 aa10.31□□□□□ -0.76
C12orf56-205ENST00000542397 HCSTQ9UBK5 93 aa10.31□□□□□ -0.76
C12orf56-205ENST00000542397 PCDHGA10Q9Y5H3 936 aa10.31□□□□□ -0.76
C12orf56-205ENST00000542397 PHF14O94880 888 aa10.3□□□□□ -0.76
C12orf56-205ENST00000542397 HRO43593 1189 aa10.29□□□□□ -0.76
C12orf56-205ENST00000542397 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
C12orf56-205ENST00000542397 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
C12orf56-205ENST00000542397 TYW1BQ6NUM6 668 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms