RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 ARHGAP5Q13017 1502 aa32.55■■■□□ 2.8
DDB1-220ENST00000542337 ZMYM4Q5VZL5 1548 aa32.54■■■□□ 2.8
DDB1-220ENST00000542337 LRRIQ1Q96JM4 1722 aa32.54■■■□□ 2.8
DDB1-220ENST00000542337 ZFYVE16Q7Z3T8 1539 aa32.52■■■□□ 2.8
DDB1-220ENST00000542337 MYT1LQ9UL68 1186 aa32.47■■■□□ 2.79
DDB1-220ENST00000542337 YEATS2Q9ULM3 1422 aa32.47■■■□□ 2.79
DDB1-220ENST00000542337 ADAMTSL3P82987 1691 aa32.46■■■□□ 2.79
DDB1-220ENST00000542337 PTPRMP28827 1452 aa32.45■■■□□ 2.79
DDB1-220ENST00000542337 ZNF518AQ6AHZ1 1483 aa32.44■■■□□ 2.78
DDB1-220ENST00000542337 BCORL1Q5H9F3 1711 aa32.44■■■□□ 2.78
DDB1-220ENST00000542337 AFAP1Q8N556 730 aa32.43■■■□□ 2.78
DDB1-220ENST00000542337 HECW2Q9P2P5 1572 aa32.41■■■□□ 2.78
DDB1-220ENST00000542337 CEP162Q5TB80 1403 aa32.4■■■□□ 2.78
DDB1-220ENST00000542337 ATP10AO60312 1499 aa32.39■■■□□ 2.78
DDB1-220ENST00000542337 MLECQ14165 292 aa32.37■■■□□ 2.77
DDB1-220ENST00000542337 MTUS2Q5JR59 1369 aa32.35■■■□□ 2.77
DDB1-220ENST00000542337 ZNF777Q9ULD5 760 aaPredicted RBP32.35■■■□□ 2.77
DDB1-220ENST00000542337 C9orf84Q5VXU9 1444 aa32.34■■■□□ 2.77
DDB1-220ENST00000542337 PREX2Q70Z35 1606 aa32.34■■■□□ 2.77
DDB1-220ENST00000542337 MADDQ8WXG6 1647 aa32.34■■■□□ 2.77
DDB1-220ENST00000542337 CDC42BPBQ9Y5S2 1711 aa32.34■■■□□ 2.77
DDB1-220ENST00000542337 KDM5CP41229 1560 aa32.28■■■□□ 2.76
DDB1-220ENST00000542337 CFDP1Q9UEE9 299 aaPredicted RBP32.28■■■□□ 2.76
DDB1-220ENST00000542337 CCNB3Q8WWL7 1395 aa32.28■■■□□ 2.76
DDB1-220ENST00000542337 LOC105371045A0A1W2PR82 267 aa32.27■■■□□ 2.76
DDB1-220ENST00000542337 PLPPR3Q6T4P5 718 aa32.27■■■□□ 2.76
DDB1-220ENST00000542337 ABCC1P33527 1531 aa32.26■■■□□ 2.76
DDB1-220ENST00000542337 GPATCH8Q9UKJ3 1502 aaKnown RBP32.26■■■□□ 2.76
DDB1-220ENST00000542337 TRAPPC8Q9Y2L5 1435 aa32.26■■■□□ 2.75
DDB1-220ENST00000542337 MLH3Q9UHC1 1453 aa32.25■■■□□ 2.75
DDB1-220ENST00000542337 CDC42BPAQ5VT25 1732 aa32.23■■■□□ 2.75
DDB1-220ENST00000542337 ARHGEF12Q9NZN5 1544 aa32.23■■■□□ 2.75
DDB1-220ENST00000542337 RIMS1Q86UR5 1692 aaKnown RBP32.23■■■□□ 2.75
DDB1-220ENST00000542337 SIGLEC1Q9BZZ2 1709 aa32.19■■■□□ 2.74
DDB1-220ENST00000542337 HNRNPMP52272 730 aaKnown RBP eCLIP32.18■■■□□ 2.742e-7■■■■□ 24.8
DDB1-220ENST00000542337 PLEKHH2Q8IVE3 1493 aa32.17■■■□□ 2.74
DDB1-220ENST00000542337 ITSN2Q9NZM3 1697 aa32.17■■■□□ 2.74
DDB1-220ENST00000542337 SPAG9O60271 1321 aaKnown RBP32.15■■■□□ 2.74
DDB1-220ENST00000542337 KIAA1107Q9UPP5 1409 aa32.15■■■□□ 2.74
DDB1-220ENST00000542337 EHBP1L1Q8N3D4 1523 aa32.15■■■□□ 2.74
DDB1-220ENST00000542337 DIP2CQ9Y2E4 1556 aa32.14■■■□□ 2.74
DDB1-220ENST00000542337 ESF1Q9H501 851 aaKnown RBP32.13■■■□□ 2.73
DDB1-220ENST00000542337 SAMD9LQ8IVG5 1584 aa32.12■■■□□ 2.73
DDB1-220ENST00000542337 REREQ9P2R6 1566 aa32.11■■■□□ 2.73
DDB1-220ENST00000542337 SYCP2Q9BX26 1530 aa32.1■■■□□ 2.73
DDB1-220ENST00000542337 FER1L4A9Z1Z3 1794 aa32.09■■■□□ 2.73
DDB1-220ENST00000542337 ABCA6Q8N139 1617 aa32.08■■■□□ 2.73
DDB1-220ENST00000542337 LMTK3Q96Q04 1460 aa32.05■■■□□ 2.72
DDB1-220ENST00000542337 VPS8Q8N3P4 1428 aa32.05■■■□□ 2.72
DDB1-220ENST00000542337 AGLP35573 1532 aa32.05■■■□□ 2.72
DDB1-220ENST00000542337 KIDINS220Q9ULH0 1771 aa32.02■■■□□ 2.72
DDB1-220ENST00000542337 CEBPAP49715 358 aaPredicted RBP32.02■■■□□ 2.72
DDB1-220ENST00000542337 ZNF644Q9H582 1327 aaPredicted RBP32.01■■■□□ 2.72
DDB1-220ENST00000542337 TIAM1Q13009 1591 aa32.01■■■□□ 2.71
DDB1-220ENST00000542337 HSPA2P54652 639 aa31.98■■■□□ 2.71
DDB1-220ENST00000542337 NCOA2Q15596 1464 aa31.97■■■□□ 2.71
DDB1-220ENST00000542337 ATP7AQ04656 1500 aa31.95■■■□□ 2.7
DDB1-220ENST00000542337 SUPT6HQ7KZ85 1726 aaKnown RBP31.95■■■□□ 2.7
DDB1-220ENST00000542337 RSPH4AQ5TD94 716 aa31.93■■■□□ 2.7
DDB1-220ENST00000542337 ILDR1Q86SU0 546 aaPredicted RBP31.92■■■□□ 2.7
DDB1-220ENST00000542337 CNTLNQ9NXG0 1405 aa31.92■■■□□ 2.7
DDB1-220ENST00000542337 A2MP01023 1474 aa31.9■■■□□ 2.7
DDB1-220ENST00000542337 MBD5Q9P267 1494 aa31.9■■■□□ 2.7
DDB1-220ENST00000542337 LRRC9Q6ZRR7 1453 aa31.89■■■□□ 2.7
DDB1-220ENST00000542337 APLP2Q06481 763 aa31.88■■■□□ 2.69
DDB1-220ENST00000542337 INO80Q9ULG1 1556 aaPredicted RBP31.86■■■□□ 2.69
DDB1-220ENST00000542337 RTEL1-TNFRSF6BF6WH68 1400 aa31.85■■■□□ 2.69
DDB1-220ENST00000542337 MAP3K1Q13233 1512 aa31.84■■■□□ 2.69
DDB1-220ENST00000542337 UHRF1BP1Q6BDS2 1440 aa31.83■■■□□ 2.69
DDB1-220ENST00000542337 GGT6Q6P531 493 aa31.83■■■□□ 2.69
DDB1-220ENST00000542337 TSPY4P0CV99 314 aa31.82■■■□□ 2.68
DDB1-220ENST00000542337 TSPY10P0CW01 314 aa31.82■■■□□ 2.68
DDB1-220ENST00000542337 CAMSAP2Q08AD1 1489 aa31.81■■■□□ 2.68
DDB1-220ENST00000542337 KANK4Q5T7N3 995 aaPredicted RBP31.81■■■□□ 2.68
DDB1-220ENST00000542337 CCDC141Q6ZP82 1450 aa31.8■■■□□ 2.68
DDB1-220ENST00000542337 PPP6R1Q9UPN7 881 aa31.8■■■□□ 2.68
DDB1-220ENST00000542337 PREX1Q8TCU6 1659 aa31.8■■■□□ 2.68
DDB1-220ENST00000542337 SETD1BQ9UPS6 1966 aaKnown RBP31.77■■■□□ 2.68
DDB1-220ENST00000542337 ZMYM3Q14202 1370 aa31.77■■■□□ 2.68
DDB1-220ENST00000542337 PLXNC1O60486 1568 aa31.77■■■□□ 2.68
DDB1-220ENST00000542337 DHX29Q7Z478 1369 aaKnown RBP31.76■■■□□ 2.67
DDB1-220ENST00000542337 C3P01024 1663 aa31.76■■■□□ 2.67
DDB1-220ENST00000542337 ADGBQ8N7X0 1667 aa31.75■■■□□ 2.67
DDB1-220ENST00000542337 DMRT2Q9Y5R5 561 aa31.73■■■□□ 2.67
DDB1-220ENST00000542337 NPATQ14207 1427 aa31.69■■■□□ 2.66
DDB1-220ENST00000542337 KIF3BO15066 747 aa31.69■■■□□ 2.66
DDB1-220ENST00000542337 MIA2Q96PC5 1412 aa31.67■■■□□ 2.66
DDB1-220ENST00000542337 FBXO41Q8TF61 875 aa31.67■■■□□ 2.66
DDB1-220ENST00000542337 ARHGEF5Q12774 1597 aa31.67■■■□□ 2.66
DDB1-220ENST00000542337 MROH2AA6NES4 1674 aa31.67■■■□□ 2.66
DDB1-220ENST00000542337 MYOM3Q5VTT5 1437 aa31.66■■■□□ 2.66
DDB1-220ENST00000542337 CLTCQ00610 1675 aaKnown RBP31.6■■■□□ 2.65
DDB1-220ENST00000542337 WASHC2CQ9Y4E1 1318 aa31.56■■■□□ 2.64
DDB1-220ENST00000542337 PTPRKQ15262 1439 aa31.55■■■□□ 2.64
DDB1-220ENST00000542337 CERKQ8TCT0 537 aa31.52■■■□□ 2.64
DDB1-220ENST00000542337 MAST1Q9Y2H9 1570 aa31.49■■■□□ 2.63
DDB1-220ENST00000542337 FAM135AQ9P2D6 1515 aa31.48■■■□□ 2.63
DDB1-220ENST00000542337 PTPRTO14522 1441 aa31.48■■■□□ 2.63
DDB1-220ENST00000542337 STRCQ7RTU9 1775 aa31.48■■■□□ 2.63
DDB1-220ENST00000542337 KDM5DQ9BY66 1539 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms