RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 GALR2O43603 387 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-219ENST00000542112 LMOD2Q6P5Q4 547 aa6.57□□□□□ -1.36
SNHG1-219ENST00000542112 ARIH1Q9Y4X5 557 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-219ENST00000542112 CLSPNQ9HAW4 1339 aa6.54□□□□□ -1.36
SNHG1-219ENST00000542112 CAMK2BQ13554 666 aa6.54□□□□□ -1.36
SNHG1-219ENST00000542112 SMYD5Q6GMV2 418 aa6.54□□□□□ -1.36
SNHG1-219ENST00000542112 GPHNQ9NQX3 736 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-219ENST00000542112 TESPA1A2RU30 521 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-219ENST00000542112 IER5LQ5T953 404 aa6.53□□□□□ -1.36
SNHG1-219ENST00000542112 MYT1LQ9UL68 1186 aa6.53□□□□□ -1.36
SNHG1-219ENST00000542112 PPP1R15BQ5SWA1 713 aa6.52□□□□□ -1.37
SNHG1-219ENST00000542112 SEMA3EO15041 775 aa6.51□□□□□ -1.37
SNHG1-219ENST00000542112 ATMINO43313 823 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-219ENST00000542112 ATN1P54259 1190 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-219ENST00000542112 ASTLQ6HA08 431 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-219ENST00000542112 UBE2Q2Q8WVN8 375 aa6.51□□□□□ -1.37
SNHG1-219ENST00000542112 OCEL1Q9H607 264 aa6.51□□□□□ -1.37
SNHG1-219ENST00000542112 G3V3G9 751 aa6.5□□□□□ -1.37
SNHG1-219ENST00000542112 EVX2Q03828 476 aa6.5□□□□□ -1.37
SNHG1-219ENST00000542112 MICALL2Q8IY33 904 aa6.5□□□□□ -1.37
SNHG1-219ENST00000542112 PDCD7Q8N8D1 485 aaKnown RBP6.5□□□□□ -1.37
SNHG1-219ENST00000542112 IRX5P78411 483 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-219ENST00000542112 TMC2Q8TDI7 906 aa6.49□□□□□ -1.37
SNHG1-219ENST00000542112 DPY19L2Q6NUT2 758 aa6.48□□□□□ -1.37
SNHG1-219ENST00000542112 TMEM121BQ9BXQ6 578 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-219ENST00000542112 BOLA1Q9Y3E2 137 aa6.48□□□□□ -1.37
SNHG1-219ENST00000542112 PLCG2P16885 1265 aa6.47□□□□□ -1.37
SNHG1-219ENST00000542112 FOXK1P85037 733 aa6.47□□□□□ -1.37
SNHG1-219ENST00000542112 ZC3H15Q8WU90 426 aaKnown RBP6.47□□□□□ -1.37
SNHG1-219ENST00000542112 L3MBTL3Q96JM7 780 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-219ENST00000542112 SPDYE16A6NNV3 312 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-219ENST00000542112 DSG2Q14126 1118 aa6.46□□□□□ -1.38
SNHG1-219ENST00000542112 ERICH6BQ5W0A0 696 aa6.46□□□□□ -1.38
SNHG1-219ENST00000542112 PPARGC1BQ86YN6 1023 aaKnown RBP6.45□□□□□ -1.38
SNHG1-219ENST00000542112 GTF3C3Q9Y5Q9 886 aa6.45□□□□□ -1.38
SNHG1-219ENST00000542112 GABBR2O75899 941 aa6.44□□□□□ -1.38
SNHG1-219ENST00000542112 DCAF1Q9Y4B6 1507 aa6.44□□□□□ -1.38
SNHG1-219ENST00000542112 PDIA6Q15084 440 aa6.43□□□□□ -1.38
SNHG1-219ENST00000542112 DCBLD2Q96PD2 775 aa6.43□□□□□ -1.38
SNHG1-219ENST00000542112 EMILIN3Q9NT22 766 aa6.43□□□□□ -1.38
SNHG1-219ENST00000542112 DPYSL4O14531 572 aa6.42□□□□□ -1.38
SNHG1-219ENST00000542112 KIF3CO14782 793 aa6.42□□□□□ -1.38
SNHG1-219ENST00000542112 ZMYND10O75800 440 aa6.42□□□□□ -1.38
SNHG1-219ENST00000542112 SEC24BO95487 1268 aa6.42□□□□□ -1.38
SNHG1-219ENST00000542112 TMEM132AQ24JP5 1023 aa6.42□□□□□ -1.38
SNHG1-219ENST00000542112 PLPP6Q8IY26 295 aa6.42□□□□□ -1.38
SNHG1-219ENST00000542112 C2orf72A6NCS6 295 aa6.41□□□□□ -1.38
SNHG1-219ENST00000542112 RANGAP1P46060 587 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-219ENST00000542112 SLC39A7Q92504 469 aa6.41□□□□□ -1.38
SNHG1-219ENST00000542112 MLLT3P42568 568 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-219ENST00000542112 ARXQ96QS3 562 aa6.4□□□□□ -1.38
SNHG1-219ENST00000542112 PCGF6Q9BYE7 350 aa6.4□□□□□ -1.38
SNHG1-219ENST00000542112 C7P10643 843 aa6.39□□□□□ -1.39
SNHG1-219ENST00000542112 NEUROD1Q13562 356 aa6.39□□□□□ -1.39
SNHG1-219ENST00000542112 GPIHBP1Q8IV16 184 aa6.39□□□□□ -1.39
SNHG1-219ENST00000542112 ZCCHC6Q5VYS8 1495 aaKnown RBP6.39□□□□□ -1.39
SNHG1-219ENST00000542112 MAP3K9P80192 1104 aa6.38□□□□□ -1.39
SNHG1-219ENST00000542112 BARGINQ6ZT62 677 aa6.38□□□□□ -1.39
SNHG1-219ENST00000542112 SLC24A3Q9HC58 644 aa6.38□□□□□ -1.39
SNHG1-219ENST00000542112 RBM26Q5T8P6 1007 aaKnown RBP6.37□□□□□ -1.39
SNHG1-219ENST00000542112 BRPF1P55201 1214 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-219ENST00000542112 COLQQ9Y215 455 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-219ENST00000542112 TBC1D12O60347 775 aa6.34□□□□□ -1.39
SNHG1-219ENST00000542112 NEUROD2Q15784 382 aa6.34□□□□□ -1.39
SNHG1-219ENST00000542112 POTEHQ6S545 545 aa6.34□□□□□ -1.39
SNHG1-219ENST00000542112 TMEM92Q6UXU6 159 aa6.34□□□□□ -1.39
SNHG1-219ENST00000542112 C3orf67Q6ZVT6 689 aa6.34□□□□□ -1.39
SNHG1-219ENST00000542112 OXER1Q8TDS5 423 aa6.34□□□□□ -1.39
SNHG1-219ENST00000542112 AK7Q96M32 723 aa6.34□□□□□ -1.39
SNHG1-219ENST00000542112 METRNQ9UJH8 293 aa6.34□□□□□ -1.39
SNHG1-219ENST00000542112 ZNF316A6NFI3 1004 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-219ENST00000542112 TRIM26Q12899 539 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-219ENST00000542112 GRXCR2A6NFK2 248 aa6.32□□□□□ -1.4
SNHG1-219ENST00000542112 PTGER2P43116 358 aa6.32□□□□□ -1.4
SNHG1-219ENST00000542112 KRI1Q8N9T8 703 aaKnown RBP6.32□□□□□ -1.4
SNHG1-219ENST00000542112 UPF1Q92900 1129 aaKnown RBP eCLIP6.32□□□□□ -1.41e-26■□□□□ 8.6
SNHG1-219ENST00000542112 POTEFA5A3E0 1075 aa6.31□□□□□ -1.4
SNHG1-219ENST00000542112 SLC34A2O95436 690 aa6.3□□□□□ -1.4
SNHG1-219ENST00000542112 PTCD2Q8WV60 388 aaKnown RBP6.3□□□□□ -1.4
SNHG1-219ENST00000542112 EVI5O60447 810 aa6.29□□□□□ -1.4
SNHG1-219ENST00000542112 NEFLP07196 543 aa6.29□□□□□ -1.4
SNHG1-219ENST00000542112 PODXL2Q9NZ53 605 aa6.29□□□□□ -1.4
SNHG1-219ENST00000542112 NUTM2FA1L443 756 aa6.28□□□□□ -1.4
SNHG1-219ENST00000542112 GPR37O15354 613 aa6.28□□□□□ -1.4
SNHG1-219ENST00000542112 OSBPP22059 807 aa6.28□□□□□ -1.4
SNHG1-219ENST00000542112 PKNOX2Q96KN3 472 aa6.28□□□□□ -1.4
SNHG1-219ENST00000542112 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.28□□□□□ -1.4
SNHG1-219ENST00000542112 MINK1Q8N4C8 1332 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-219ENST00000542112 FCHSD2O94868 740 aa6.27□□□□□ -1.41
SNHG1-219ENST00000542112 POTEIP0CG38 1075 aa6.27□□□□□ -1.41
SNHG1-219ENST00000542112 SP7Q8TDD2 431 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-219ENST00000542112 TRIM66O15016 1216 aa6.26□□□□□ -1.41
SNHG1-219ENST00000542112 DDX12PQ92771 950 aa6.26□□□□□ -1.41
SNHG1-219ENST00000542112 ANO8Q9HCE9 1232 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-219ENST00000542112 GNPATO15228 680 aa6.25□□□□□ -1.41
SNHG1-219ENST00000542112 MAP2K5Q13163 448 aa6.25□□□□□ -1.41
SNHG1-219ENST00000542112 HIC1Q14526 733 aa6.25□□□□□ -1.41
SNHG1-219ENST00000542112 PDE4DQ08499 809 aa6.24□□□□□ -1.41
SNHG1-219ENST00000542112 EPAS1Q99814 870 aa6.24□□□□□ -1.41
SNHG1-219ENST00000542112 PHF14O94880 888 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms