RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 PREX2Q70Z35 1606 aa32.56■■■□□ 2.8
MSRB3-211ENST00000541897 CDC42BPAQ5VT25 1732 aa32.54■■■□□ 2.8
MSRB3-211ENST00000541897 ITSN2Q9NZM3 1697 aa32.53■■■□□ 2.8
MSRB3-211ENST00000541897 HECW2Q9P2P5 1572 aa32.5■■■□□ 2.79
MSRB3-211ENST00000541897 NEO1Q92859 1461 aa32.5■■■□□ 2.79
MSRB3-211ENST00000541897 PHLDB1Q86UU1 1377 aa32.5■■■□□ 2.79
MSRB3-211ENST00000541897 CFAP74Q9C0B2 1584 aa32.49■■■□□ 2.79
MSRB3-211ENST00000541897 CDC42BPBQ9Y5S2 1711 aa32.49■■■□□ 2.79
MSRB3-211ENST00000541897 MYOM3Q5VTT5 1437 aa32.49■■■□□ 2.79
MSRB3-211ENST00000541897 FANCAO15360 1455 aa32.48■■■□□ 2.79
MSRB3-211ENST00000541897 EFCAB2Q5VUJ9 269 aa32.48■■■□□ 2.79
MSRB3-211ENST00000541897 ARHGAP5Q13017 1502 aa32.47■■■□□ 2.79
MSRB3-211ENST00000541897 MIA2Q96PC5 1412 aa32.45■■■□□ 2.79
MSRB3-211ENST00000541897 CFDP1Q9UEE9 299 aaPredicted RBP32.44■■■□□ 2.78
MSRB3-211ENST00000541897 RAPGEF3O95398 923 aa32.43■■■□□ 2.78
MSRB3-211ENST00000541897 ILDR1Q86SU0 546 aaPredicted RBP32.42■■■□□ 2.78
MSRB3-211ENST00000541897 PPARGC1BQ86YN6 1023 aaKnown RBP32.41■■■□□ 2.78
MSRB3-211ENST00000541897 AKNAQ7Z591 1439 aa32.39■■■□□ 2.78
MSRB3-211ENST00000541897 FGD6Q6ZV73 1430 aa32.35■■■□□ 2.77
MSRB3-211ENST00000541897 PLEKHH2Q8IVE3 1493 aa32.35■■■□□ 2.77
MSRB3-211ENST00000541897 FRMPD1Q5SYB0 1578 aa32.32■■■□□ 2.77
MSRB3-211ENST00000541897 SAMD9LQ8IVG5 1584 aa32.32■■■□□ 2.77
MSRB3-211ENST00000541897 KIAA1107Q9UPP5 1409 aa32.32■■■□□ 2.76
MSRB3-211ENST00000541897 ABCC1P33527 1531 aa32.3■■■□□ 2.76
MSRB3-211ENST00000541897 TCOF1Q13428 1488 aaKnown RBP32.29■■■□□ 2.76
MSRB3-211ENST00000541897 CAMSAP2Q08AD1 1489 aa32.28■■■□□ 2.76
MSRB3-211ENST00000541897 ZNF777Q9ULD5 760 aaPredicted RBP32.27■■■□□ 2.76
MSRB3-211ENST00000541897 PTPN23Q9H3S7 1636 aa32.26■■■□□ 2.76
MSRB3-211ENST00000541897 SCAPERQ9BY12 1400 aa32.26■■■□□ 2.75
MSRB3-211ENST00000541897 ZNF644Q9H582 1327 aaPredicted RBP32.24■■■□□ 2.75
MSRB3-211ENST00000541897 DENND4BO75064 1496 aaPredicted RBP32.23■■■□□ 2.75
MSRB3-211ENST00000541897 ADAMTSL3P82987 1691 aa32.23■■■□□ 2.75
MSRB3-211ENST00000541897 RRBP1Q9P2E9 1410 aaKnown RBP32.23■■■□□ 2.75
MSRB3-211ENST00000541897 RICTORQ6R327 1708 aa32.23■■■□□ 2.75
MSRB3-211ENST00000541897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.22■■■□□ 2.75
MSRB3-211ENST00000541897 ARHGEF12Q9NZN5 1544 aa32.21■■■□□ 2.75
MSRB3-211ENST00000541897 RSPH4AQ5TD94 716 aa32.2■■■□□ 2.75
MSRB3-211ENST00000541897 MBD5Q9P267 1494 aa32.2■■■□□ 2.75
MSRB3-211ENST00000541897 SYCP2Q9BX26 1530 aa32.2■■■□□ 2.74
MSRB3-211ENST00000541897 POGZQ7Z3K3 1410 aa32.18■■■□□ 2.74
MSRB3-211ENST00000541897 ZNF518AQ6AHZ1 1483 aa32.17■■■□□ 2.74
MSRB3-211ENST00000541897 ARHGEF5Q12774 1597 aa32.17■■■□□ 2.74
MSRB3-211ENST00000541897 ARID4BQ4LE39 1312 aaPredicted RBP32.17■■■□□ 2.74
MSRB3-211ENST00000541897 BCORL1Q5H9F3 1711 aa32.16■■■□□ 2.74
MSRB3-211ENST00000541897 HNRNPMP52272 730 aaKnown RBP eCLIP32.14■■■□□ 2.74
MSRB3-211ENST00000541897 PTPRMP28827 1452 aa32.13■■■□□ 2.73
MSRB3-211ENST00000541897 TRAPPC8Q9Y2L5 1435 aa32.13■■■□□ 2.73
MSRB3-211ENST00000541897 KDM5CP41229 1560 aa32.12■■■□□ 2.73
MSRB3-211ENST00000541897 ARHGEF40Q8TER5 1519 aa32.12■■■□□ 2.73
MSRB3-211ENST00000541897 CCDC141Q6ZP82 1450 aa32.1■■■□□ 2.73
MSRB3-211ENST00000541897 MADDQ8WXG6 1647 aa32.1■■■□□ 2.73
MSRB3-211ENST00000541897 ZMYM4Q5VZL5 1548 aa32.1■■■□□ 2.73
MSRB3-211ENST00000541897 FAM50AQ14320 339 aaKnown RBP32.08■■■□□ 2.73
MSRB3-211ENST00000541897 DNMT1P26358 1616 aaKnown RBP32.07■■■□□ 2.72
MSRB3-211ENST00000541897 AFAP1Q8N556 730 aa32.06■■■□□ 2.72
MSRB3-211ENST00000541897 MAGI2Q86UL8 1455 aa32.05■■■□□ 2.72
MSRB3-211ENST00000541897 MLH3Q9UHC1 1453 aa32.03■■■□□ 2.72
MSRB3-211ENST00000541897 ABCC5O15440 1437 aa32.02■■■□□ 2.72
MSRB3-211ENST00000541897 DAPK1P53355 1430 aa32.02■■■□□ 2.72
MSRB3-211ENST00000541897 YEATS2Q9ULM3 1422 aa32.02■■■□□ 2.72
MSRB3-211ENST00000541897 SIGLEC1Q9BZZ2 1709 aa32.02■■■□□ 2.72
MSRB3-211ENST00000541897 SHANK2Q9UPX8 1470 aa32.02■■■□□ 2.72
MSRB3-211ENST00000541897 RTEL1-TNFRSF6BF6WH68 1400 aa32.01■■■□□ 2.72
MSRB3-211ENST00000541897 ZFYVE16Q7Z3T8 1539 aa32■■■□□ 2.71
MSRB3-211ENST00000541897 RIMS1Q86UR5 1692 aaKnown RBP32■■■□□ 2.71
MSRB3-211ENST00000541897 MAST1Q9Y2H9 1570 aa31.99■■■□□ 2.71
MSRB3-211ENST00000541897 TSPY4P0CV99 314 aa31.99■■■□□ 2.71
MSRB3-211ENST00000541897 TSPY10P0CW01 314 aa31.99■■■□□ 2.71
MSRB3-211ENST00000541897 CROCC2H7BZ55 1655 aa31.98■■■□□ 2.71
MSRB3-211ENST00000541897 SPAG9O60271 1321 aaKnown RBP31.98■■■□□ 2.71
MSRB3-211ENST00000541897 INO80Q9ULG1 1556 aaPredicted RBP31.96■■■□□ 2.71
MSRB3-211ENST00000541897 C9orf84Q5VXU9 1444 aa31.93■■■□□ 2.7
MSRB3-211ENST00000541897 ATP7AQ04656 1500 aa31.93■■■□□ 2.7
MSRB3-211ENST00000541897 KIDINS220Q9ULH0 1771 aa31.91■■■□□ 2.7
MSRB3-211ENST00000541897 MLECQ14165 292 aa31.89■■■□□ 2.7
MSRB3-211ENST00000541897 PLPPR3Q6T4P5 718 aa31.89■■■□□ 2.7
MSRB3-211ENST00000541897 ADGRL2O95490 1459 aa31.88■■■□□ 2.69
MSRB3-211ENST00000541897 PTPRKQ15262 1439 aa31.87■■■□□ 2.69
MSRB3-211ENST00000541897 PLXNC1O60486 1568 aa31.85■■■□□ 2.69
MSRB3-211ENST00000541897 ROCK1Q13464 1354 aa31.83■■■□□ 2.69
MSRB3-211ENST00000541897 DIP2CQ9Y2E4 1556 aa31.83■■■□□ 2.69
MSRB3-211ENST00000541897 MYT1LQ9UL68 1186 aa31.83■■■□□ 2.69
MSRB3-211ENST00000541897 LMTK3Q96Q04 1460 aa31.83■■■□□ 2.69
MSRB3-211ENST00000541897 ABCA6Q8N139 1617 aa31.82■■■□□ 2.69
MSRB3-211ENST00000541897 FER1L4A9Z1Z3 1794 aa31.82■■■□□ 2.68
MSRB3-211ENST00000541897 ATP10AO60312 1499 aa31.82■■■□□ 2.68
MSRB3-211ENST00000541897 ANKRD30AQ9BXX3 1397 aa31.81■■■□□ 2.68
MSRB3-211ENST00000541897 ADGBQ8N7X0 1667 aa31.81■■■□□ 2.68
MSRB3-211ENST00000541897 NCOA1Q15788 1441 aa31.81■■■□□ 2.68
MSRB3-211ENST00000541897 REREQ9P2R6 1566 aa31.81■■■□□ 2.68
MSRB3-211ENST00000541897 ITGAEP38570 1179 aa31.78■■■□□ 2.68
MSRB3-211ENST00000541897 CHIC2Q9UKJ5 165 aa31.76■■■□□ 2.67
MSRB3-211ENST00000541897 A2MP01023 1474 aa31.73■■■□□ 2.67
MSRB3-211ENST00000541897 DHX29Q7Z478 1369 aaKnown RBP31.73■■■□□ 2.67
MSRB3-211ENST00000541897 KIF15Q9NS87 1388 aa31.73■■■□□ 2.67
MSRB3-211ENST00000541897 TRIM26Q12899 539 aaPredicted RBP31.73■■■□□ 2.67
MSRB3-211ENST00000541897 DUOX2Q9NRD8 1548 aa31.72■■■□□ 2.67
MSRB3-211ENST00000541897 HSPA2P54652 639 aa31.72■■■□□ 2.67
MSRB3-211ENST00000541897 FBXO41Q8TF61 875 aa31.71■■■□□ 2.67
MSRB3-211ENST00000541897 AGLP35573 1532 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms