RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PAXIP1Q6ZW49 1069 aaPredicted RBP10.41□□□□□ -0.74
SNHG1-217ENST00000541578 C2orf72A6NCS6 295 aa10.4□□□□□ -0.74
SNHG1-217ENST00000541578 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
SNHG1-217ENST00000541578 KIF3CO14782 793 aa10.39□□□□□ -0.75
SNHG1-217ENST00000541578 DOK7Q18PE1 504 aa10.37□□□□□ -0.75
SNHG1-217ENST00000541578 GPHNQ9NQX3 736 aaPredicted RBP10.36□□□□□ -0.75
SNHG1-217ENST00000541578 ST18O60284 1047 aa10.35□□□□□ -0.75
SNHG1-217ENST00000541578 HOXB3P14651 431 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-217ENST00000541578 PDE4AP27815 886 aa10.33□□□□□ -0.76
SNHG1-217ENST00000541578 LCE2DQ5TA82 110 aaPredicted RBP10.33□□□□□ -0.76
SNHG1-217ENST00000541578 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
SNHG1-217ENST00000541578 RIMBP2O15034 1052 aa10.32□□□□□ -0.76
SNHG1-217ENST00000541578 CRISPLD2Q9H0B8 497 aa10.31□□□□□ -0.76
SNHG1-217ENST00000541578 FOXK1P85037 733 aa10.3□□□□□ -0.76
SNHG1-217ENST00000541578 DSG2Q14126 1118 aa10.29□□□□□ -0.76
SNHG1-217ENST00000541578 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
SNHG1-217ENST00000541578 PLPP6Q8IY26 295 aa10.29□□□□□ -0.76
SNHG1-217ENST00000541578 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
SNHG1-217ENST00000541578 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
SNHG1-217ENST00000541578 ZSWIM6Q9HCJ5 1215 aa10.27□□□□□ -0.77
SNHG1-217ENST00000541578 POTEMA6NI47 508 aa10.26□□□□□ -0.77
SNHG1-217ENST00000541578 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
SNHG1-217ENST00000541578 SLC34A2O95436 690 aa10.25□□□□□ -0.77
SNHG1-217ENST00000541578 HOXB1P14653 301 aaPredicted RBP10.24□□□□□ -0.77
SNHG1-217ENST00000541578 PPP1R15BQ5SWA1 713 aa10.24□□□□□ -0.77
SNHG1-217ENST00000541578 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
SNHG1-217ENST00000541578 DDX27Q96GQ7 796 aaKnown RBP10.23□□□□□ -0.77
SNHG1-217ENST00000541578 EMP3P54852 163 aa10.22□□□□□ -0.77
SNHG1-217ENST00000541578 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
SNHG1-217ENST00000541578 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
SNHG1-217ENST00000541578 MFSD10Q14728 455 aa10.21□□□□□ -0.77
SNHG1-217ENST00000541578 PLCB2Q00722 1185 aa10.2□□□□□ -0.78
SNHG1-217ENST00000541578 PTCD2Q8WV60 388 aaKnown RBP10.19□□□□□ -0.78
SNHG1-217ENST00000541578 TSHZ2Q9NRE2 1034 aa10.19□□□□□ -0.78
SNHG1-217ENST00000541578 PCDHGA4Q9Y5G9 962 aa10.19□□□□□ -0.78
SNHG1-217ENST00000541578 TBC1D12O60347 775 aa10.17□□□□□ -0.78
SNHG1-217ENST00000541578 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.782e-12■■■□□ 16.9
SNHG1-217ENST00000541578 FAM205CA6NFA0 338 aa10.15□□□□□ -0.78
SNHG1-217ENST00000541578 ERBB3P21860 1342 aa10.14□□□□□ -0.79
SNHG1-217ENST00000541578 OXER1Q8TDS5 423 aa10.14□□□□□ -0.79
SNHG1-217ENST00000541578 UPF1Q92900 1129 aaKnown RBP eCLIP10.14□□□□□ -0.791e-26■□□□□ 8.6
SNHG1-217ENST00000541578 WDR70Q9NW82 654 aa10.14□□□□□ -0.79
SNHG1-217ENST00000541578 NUDT7P0C024 238 aa10.13□□□□□ -0.79
SNHG1-217ENST00000541578 PCDH10Q9P2E7 1040 aa10.11□□□□□ -0.79
SNHG1-217ENST00000541578 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
SNHG1-217ENST00000541578 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
SNHG1-217ENST00000541578 ZNF316A6NFI3 1004 aaPredicted RBP10.09□□□□□ -0.79
SNHG1-217ENST00000541578 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
SNHG1-217ENST00000541578 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
SNHG1-217ENST00000541578 CDAN1Q8IWY9 1227 aa10.09□□□□□ -0.79
SNHG1-217ENST00000541578 MAP3K9P80192 1104 aa10.08□□□□□ -0.8
SNHG1-217ENST00000541578 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
SNHG1-217ENST00000541578 EMILIN3Q9NT22 766 aa10.08□□□□□ -0.8
SNHG1-217ENST00000541578 KDM4FA0A1W2PPD8 638 aa10.07□□□□□ -0.8
SNHG1-217ENST00000541578 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-217ENST00000541578 E2F4Q16254 413 aa10.06□□□□□ -0.8
SNHG1-217ENST00000541578 LHX6Q9UPM6 363 aa10.06□□□□□ -0.8
SNHG1-217ENST00000541578 EVI5O60447 810 aa10.03□□□□□ -0.8
SNHG1-217ENST00000541578 PSDA5PKW4 1024 aaPredicted RBP10.02□□□□□ -0.81
SNHG1-217ENST00000541578 ZNF687Q8N1G0 1237 aa10.01□□□□□ -0.81
SNHG1-217ENST00000541578 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-217ENST00000541578 DPYSL4O14531 572 aa10□□□□□ -0.81
SNHG1-217ENST00000541578 SLC24A1O60721 1099 aa10□□□□□ -0.81
SNHG1-217ENST00000541578 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
SNHG1-217ENST00000541578 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
SNHG1-217ENST00000541578 SPDYE16A6NNV3 312 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-217ENST00000541578 ZNF454Q8N9F8 522 aa9.94□□□□□ -0.82
SNHG1-217ENST00000541578 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
SNHG1-217ENST00000541578 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
SNHG1-217ENST00000541578 FOSBP53539 338 aa9.93□□□□□ -0.82
SNHG1-217ENST00000541578 PBX2P40425 430 aa9.92□□□□□ -0.82
SNHG1-217ENST00000541578 JPH4Q96JJ6 628 aa9.92□□□□□ -0.82
SNHG1-217ENST00000541578 PDIA6Q15084 440 aa9.91□□□□□ -0.82
SNHG1-217ENST00000541578 ARHGEF1Q92888 912 aaKnown RBP9.91□□□□□ -0.82
SNHG1-217ENST00000541578 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.82
SNHG1-217ENST00000541578 KDM2AQ9Y2K7 1162 aa9.9□□□□□ -0.82
SNHG1-217ENST00000541578 PTGER2P43116 358 aa9.89□□□□□ -0.83
SNHG1-217ENST00000541578 P3H3Q8IVL6 736 aa9.89□□□□□ -0.83
SNHG1-217ENST00000541578 KCNV2Q8TDN2 545 aa9.89□□□□□ -0.83
SNHG1-217ENST00000541578 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
SNHG1-217ENST00000541578 ZDHHC16Q969W1 377 aa9.88□□□□□ -0.83
SNHG1-217ENST00000541578 AXIN2Q9Y2T1 843 aa9.88□□□□□ -0.83
SNHG1-217ENST00000541578 PHF14O94880 888 aa9.87□□□□□ -0.83
SNHG1-217ENST00000541578 POTEEQ6S8J3 1075 aa9.87□□□□□ -0.83
SNHG1-217ENST00000541578 DDX12PQ92771 950 aa9.87□□□□□ -0.83
SNHG1-217ENST00000541578 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
SNHG1-217ENST00000541578 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
SNHG1-217ENST00000541578 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
SNHG1-217ENST00000541578 KCNH8Q96L42 1107 aa9.86□□□□□ -0.83
SNHG1-217ENST00000541578 EPAS1Q99814 870 aa9.86□□□□□ -0.83
SNHG1-217ENST00000541578 BCL2L12Q9HB09 334 aa9.86□□□□□ -0.83
SNHG1-217ENST00000541578 LSM11P83369 360 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■□□□□ 9.9
SNHG1-217ENST00000541578 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
SNHG1-217ENST00000541578 KCNK17Q96T54 332 aa9.85□□□□□ -0.83
SNHG1-217ENST00000541578 PSEN2P49810 448 aa9.84□□□□□ -0.83
SNHG1-217ENST00000541578 ADAM33Q9BZ11 813 aa9.84□□□□□ -0.83
SNHG1-217ENST00000541578 PLSCR2Q9NRY7 297 aa9.84□□□□□ -0.83
SNHG1-217ENST00000541578 SPNS2Q8IVW8 549 aa9.83□□□□□ -0.84
SNHG1-217ENST00000541578 PTPREP23469 700 aa9.82□□□□□ -0.84
SNHG1-217ENST00000541578 GRXCR2A6NFK2 248 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms