RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 FANCIQ9NVI1 1328 aa15.37■□□□□ 0.05
EIF3A-203ENST00000541549 ZBTB7CA1YPR0 619 aa15.37■□□□□ 0.05
EIF3A-203ENST00000541549 ZRSR1Q15695 479 aaKnown RBP15.36■□□□□ 0.05
EIF3A-203ENST00000541549 C14orf37Q86TY3 774 aa15.36■□□□□ 0.05
EIF3A-203ENST00000541549 ARID3AQ99856 593 aa15.36■□□□□ 0.05
EIF3A-203ENST00000541549 RALBP1Q15311 655 aa15.35■□□□□ 0.05
EIF3A-203ENST00000541549 PDE4AP27815 886 aa15.34■□□□□ 0.05
EIF3A-203ENST00000541549 PRKRIP1Q9H875 184 aaPredicted RBP15.34■□□□□ 0.05
EIF3A-203ENST00000541549 MORC1Q86VD1 984 aa15.33■□□□□ 0.04
EIF3A-203ENST00000541549 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
EIF3A-203ENST00000541549 CLUAP1Q96AJ1 413 aa15.32■□□□□ 0.04
EIF3A-203ENST00000541549 CHMP4BQ9H444 224 aaKnown RBP15.32■□□□□ 0.04
EIF3A-203ENST00000541549 PLIN1O60240 522 aa15.31■□□□□ 0.04
EIF3A-203ENST00000541549 EXOC6Q8TAG9 804 aa15.31■□□□□ 0.04
EIF3A-203ENST00000541549 USP35Q9P2H5 1018 aa15.31■□□□□ 0.04
EIF3A-203ENST00000541549 APBB1O00213 710 aa15.31■□□□□ 0.04
EIF3A-203ENST00000541549 POGKQ9P215 609 aa15.31■□□□□ 0.04
EIF3A-203ENST00000541549 NACADO15069 1562 aa15.3■□□□□ 0.04
EIF3A-203ENST00000541549 GOLGA6L3A6NEY3 463 aa15.3■□□□□ 0.04
EIF3A-203ENST00000541549 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
EIF3A-203ENST00000541549 GBP4Q96PP9 640 aa15.29■□□□□ 0.04
EIF3A-203ENST00000541549 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
EIF3A-203ENST00000541549 GOLGA2Q08379 1002 aa15.29■□□□□ 0.04
EIF3A-203ENST00000541549 SAFB2Q14151 953 aaKnown RBP eCLIP15.28■□□□□ 0.04
EIF3A-203ENST00000541549 RWDD1Q9H446 243 aaPredicted RBP15.28■□□□□ 0.04
EIF3A-203ENST00000541549 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
EIF3A-203ENST00000541549 FMN1Q68DA7 1419 aa15.28■□□□□ 0.04
EIF3A-203ENST00000541549 GSE1Q14687 1217 aa15.28■□□□□ 0.04
EIF3A-203ENST00000541549 ZBED9Q6R2W3 1325 aa15.27■□□□□ 0.04
EIF3A-203ENST00000541549 ROCK2O75116 1388 aaKnown RBP15.27■□□□□ 0.04
EIF3A-203ENST00000541549 RAPGEF2Q9Y4G8 1499 aa15.27■□□□□ 0.04
EIF3A-203ENST00000541549 PDE3BQ13370 1112 aa15.27■□□□□ 0.04
EIF3A-203ENST00000541549 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.03
EIF3A-203ENST00000541549 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
EIF3A-203ENST00000541549 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
EIF3A-203ENST00000541549 KCNJ4P48050 445 aa15.26■□□□□ 0.03
EIF3A-203ENST00000541549 NUP155O75694 1391 aa15.25■□□□□ 0.03
EIF3A-203ENST00000541549 ITPRIPQ8IWB1 547 aa15.25■□□□□ 0.03
EIF3A-203ENST00000541549 GOLGA6L4A6NEF3 574 aa15.25■□□□□ 0.03
EIF3A-203ENST00000541549 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
EIF3A-203ENST00000541549 FGD1P98174 961 aa15.24■□□□□ 0.03
EIF3A-203ENST00000541549 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
EIF3A-203ENST00000541549 CDK11BP21127 795 aaKnown RBP15.23■□□□□ 0.03
EIF3A-203ENST00000541549 OS9Q13438 667 aaPredicted RBP15.23■□□□□ 0.03
EIF3A-203ENST00000541549 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
EIF3A-203ENST00000541549 RRP1P56182 461 aaKnown RBP15.23■□□□□ 0.03
EIF3A-203ENST00000541549 SRPK2P78362 688 aaKnown RBP15.23■□□□□ 0.03
EIF3A-203ENST00000541549 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
EIF3A-203ENST00000541549 A0A0G2JS52 829 aa15.22■□□□□ 0.03
EIF3A-203ENST00000541549 IPO8O15397 1037 aaKnown RBP15.21■□□□□ 0.03
EIF3A-203ENST00000541549 SOX12O15370 315 aa15.21■□□□□ 0.03
EIF3A-203ENST00000541549 PMFBP1Q8TBY8 1022 aa15.21■□□□□ 0.02
EIF3A-203ENST00000541549 EIF4G1Q04637 1599 aaKnown RBP15.2■□□□□ 0.02
EIF3A-203ENST00000541549 FAM161AQ3B820 660 aa15.2■□□□□ 0.02
EIF3A-203ENST00000541549 CRBNQ96SW2 442 aa15.2■□□□□ 0.02
EIF3A-203ENST00000541549 NAP1L2Q9ULW6 460 aaPredicted RBP15.19■□□□□ 0.02
EIF3A-203ENST00000541549 SMC4Q9NTJ3 1288 aa15.18■□□□□ 0.02
EIF3A-203ENST00000541549 CENPJQ9HC77 1338 aaPredicted RBP15.18■□□□□ 0.02
EIF3A-203ENST00000541549 DRC7Q8IY82 874 aa15.18■□□□□ 0.02
EIF3A-203ENST00000541549 FHOD3Q2V2M9 1422 aa15.18■□□□□ 0.02
EIF3A-203ENST00000541549 HSP90AA2PQ14568 343 aaPredicted RBP15.17■□□□□ 0.02
EIF3A-203ENST00000541549 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
EIF3A-203ENST00000541549 MYBBP1AQ9BQG0 1328 aaKnown RBP15.17■□□□□ 0.02
EIF3A-203ENST00000541549 MCCP23508 829 aa15.17■□□□□ 0.02
EIF3A-203ENST00000541549 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
EIF3A-203ENST00000541549 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
EIF3A-203ENST00000541549 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
EIF3A-203ENST00000541549 NRDCO43847 1150 aa15.15■□□□□ 0.02
EIF3A-203ENST00000541549 RSPH6AQ9H0K4 717 aa15.15■□□□□ 0.02
EIF3A-203ENST00000541549 STK26Q9P289 416 aa15.15■□□□□ 0.02
EIF3A-203ENST00000541549 VSIG10Q8N0Z9 540 aa15.14■□□□□ 0.01
EIF3A-203ENST00000541549 RRP7AQ9Y3A4 280 aaKnown RBP15.14■□□□□ 0.01
EIF3A-203ENST00000541549 KIF15Q9NS87 1388 aa15.14■□□□□ 0.01
EIF3A-203ENST00000541549 WIZO95785 1651 aa15.14■□□□□ 0.01
EIF3A-203ENST00000541549 PANK3Q9H999 370 aa15.14■□□□□ 0.01
EIF3A-203ENST00000541549 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
EIF3A-203ENST00000541549 GOLGA6L6A8MZA4 724 aa15.13■□□□□ 0.01
EIF3A-203ENST00000541549 PTMSP20962 102 aa15.12■□□□□ 0.01
EIF3A-203ENST00000541549 COG6Q9Y2V7 657 aa15.12■□□□□ 0.01
EIF3A-203ENST00000541549 CFAP44Q96MT7 982 aa15.12■□□□□ 0.01
EIF3A-203ENST00000541549 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
EIF3A-203ENST00000541549 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
EIF3A-203ENST00000541549 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
EIF3A-203ENST00000541549 NOL8Q76FK4 1167 aaKnown RBP15.09■□□□□ 0.01
EIF3A-203ENST00000541549 GGT6Q6P531 493 aa15.09■□□□□ 0.01
EIF3A-203ENST00000541549 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
EIF3A-203ENST00000541549 FOXD4L5Q5VV16 416 aaPredicted RBP15.09■□□□□ 0.01
EIF3A-203ENST00000541549 FOXD4L4Q8WXT5 416 aaPredicted RBP15.09■□□□□ 0.01
EIF3A-203ENST00000541549 HAP1P54257 671 aaPredicted RBP15.08■□□□□ 0.01
EIF3A-203ENST00000541549 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
EIF3A-203ENST00000541549 DDX49Q9Y6V7 483 aaKnown RBP15.08■□□□□ 0
EIF3A-203ENST00000541549 USP47Q96K76 1375 aa15.08■□□□□ 0
EIF3A-203ENST00000541549 APAF1O14727 1248 aa15.07■□□□□ 0
EIF3A-203ENST00000541549 PHLDB1Q86UU1 1377 aa15.07■□□□□ 0
EIF3A-203ENST00000541549 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 0
EIF3A-203ENST00000541549 SYAP1Q96A49 352 aaPredicted RBP15.06■□□□□ 0
EIF3A-203ENST00000541549 KANK1Q14678 1352 aa15.06■□□□□ 0
EIF3A-203ENST00000541549 IL27Q8NEV9 243 aa15.06■□□□□ 0
EIF3A-203ENST00000541549 DDX11L8A8MPP1 907 aa15.06■□□□□ 0
EIF3A-203ENST00000541549 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms