RNA–Protein interactions for RNA: ENST00000541425.5

SLC3A2-217, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-217ENST00000541425 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
SLC3A2-217ENST00000541425 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
SLC3A2-217ENST00000541425 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
SLC3A2-217ENST00000541425 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
SLC3A2-217ENST00000541425 ITSN2Q9NZM3 1697 aa17.15■□□□□ 0.34
SLC3A2-217ENST00000541425 ADGRL1O94910 1474 aa17.14■□□□□ 0.33
SLC3A2-217ENST00000541425 RAPGEF3O95398 923 aa17.12■□□□□ 0.33
SLC3A2-217ENST00000541425 ZNF777Q9ULD5 760 aaPredicted RBP17.12■□□□□ 0.33
SLC3A2-217ENST00000541425 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
SLC3A2-217ENST00000541425 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
SLC3A2-217ENST00000541425 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
SLC3A2-217ENST00000541425 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
SLC3A2-217ENST00000541425 SCAPERQ9BY12 1400 aa17.11■□□□□ 0.33
SLC3A2-217ENST00000541425 RICTORQ6R327 1708 aa17.1■□□□□ 0.33
SLC3A2-217ENST00000541425 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
SLC3A2-217ENST00000541425 FRMPD1Q5SYB0 1578 aa17.08■□□□□ 0.32
SLC3A2-217ENST00000541425 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
SLC3A2-217ENST00000541425 ABCC1P33527 1531 aa17.06■□□□□ 0.32
SLC3A2-217ENST00000541425 MYT1LQ9UL68 1186 aa17.05■□□□□ 0.32
SLC3A2-217ENST00000541425 POGZQ7Z3K3 1410 aa17.04■□□□□ 0.32
SLC3A2-217ENST00000541425 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
SLC3A2-217ENST00000541425 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.32
SLC3A2-217ENST00000541425 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
SLC3A2-217ENST00000541425 ZMYM4Q5VZL5 1548 aa17.01■□□□□ 0.31
SLC3A2-217ENST00000541425 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.311e-20■□□□□ 11
SLC3A2-217ENST00000541425 AFAP1Q8N556 730 aa16.99■□□□□ 0.31
SLC3A2-217ENST00000541425 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
SLC3A2-217ENST00000541425 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
SLC3A2-217ENST00000541425 ZNF644Q9H582 1327 aaPredicted RBP16.98■□□□□ 0.31
SLC3A2-217ENST00000541425 MYOM3Q5VTT5 1437 aa16.98■□□□□ 0.31
SLC3A2-217ENST00000541425 ARHGEF40Q8TER5 1519 aa16.98■□□□□ 0.31
SLC3A2-217ENST00000541425 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
SLC3A2-217ENST00000541425 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
SLC3A2-217ENST00000541425 TRAPPC8Q9Y2L5 1435 aa16.97■□□□□ 0.31
SLC3A2-217ENST00000541425 MAGI2Q86UL8 1455 aa16.97■□□□□ 0.31
SLC3A2-217ENST00000541425 KDM5CP41229 1560 aa16.97■□□□□ 0.31
SLC3A2-217ENST00000541425 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
SLC3A2-217ENST00000541425 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.3
SLC3A2-217ENST00000541425 MIA2Q96PC5 1412 aa16.94■□□□□ 0.3
SLC3A2-217ENST00000541425 YEATS2Q9ULM3 1422 aa16.94■□□□□ 0.3
SLC3A2-217ENST00000541425 ARID4BQ4LE39 1312 aaPredicted RBP16.94■□□□□ 0.3
SLC3A2-217ENST00000541425 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
SLC3A2-217ENST00000541425 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
SLC3A2-217ENST00000541425 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
SLC3A2-217ENST00000541425 KIDINS220Q9ULH0 1771 aa16.9■□□□□ 0.3
SLC3A2-217ENST00000541425 ABCA6Q8N139 1617 aa16.9■□□□□ 0.3
SLC3A2-217ENST00000541425 ATP10AO60312 1499 aa16.89■□□□□ 0.29
SLC3A2-217ENST00000541425 CCDC141Q6ZP82 1450 aa16.89■□□□□ 0.29
SLC3A2-217ENST00000541425 MBD5Q9P267 1494 aa16.89■□□□□ 0.29
SLC3A2-217ENST00000541425 ATP7AQ04656 1500 aa16.89■□□□□ 0.29
SLC3A2-217ENST00000541425 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.29
SLC3A2-217ENST00000541425 FGD6Q6ZV73 1430 aa16.88■□□□□ 0.29
SLC3A2-217ENST00000541425 RSPH4AQ5TD94 716 aa16.88■□□□□ 0.29
SLC3A2-217ENST00000541425 ARHGEF5Q12774 1597 aa16.88■□□□□ 0.29
SLC3A2-217ENST00000541425 C9orf84Q5VXU9 1444 aa16.87■□□□□ 0.29
SLC3A2-217ENST00000541425 INO80Q9ULG1 1556 aaPredicted RBP16.87■□□□□ 0.29
SLC3A2-217ENST00000541425 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
SLC3A2-217ENST00000541425 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
SLC3A2-217ENST00000541425 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
SLC3A2-217ENST00000541425 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
SLC3A2-217ENST00000541425 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
SLC3A2-217ENST00000541425 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
SLC3A2-217ENST00000541425 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.28
SLC3A2-217ENST00000541425 ADGBQ8N7X0 1667 aa16.83■□□□□ 0.28
SLC3A2-217ENST00000541425 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
SLC3A2-217ENST00000541425 MLECQ14165 292 aa16.82■□□□□ 0.28
SLC3A2-217ENST00000541425 CROCC2H7BZ55 1655 aa16.81■□□□□ 0.28
SLC3A2-217ENST00000541425 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
SLC3A2-217ENST00000541425 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
SLC3A2-217ENST00000541425 DNMT1P26358 1616 aaKnown RBP16.81■□□□□ 0.28
SLC3A2-217ENST00000541425 MAST1Q9Y2H9 1570 aa16.79■□□□□ 0.28
SLC3A2-217ENST00000541425 A2MP01023 1474 aa16.79■□□□□ 0.28
SLC3A2-217ENST00000541425 ADAMTSL3P82987 1691 aa16.78■□□□□ 0.28
SLC3A2-217ENST00000541425 DAPK1P53355 1430 aa16.78■□□□□ 0.28
SLC3A2-217ENST00000541425 MADDQ8WXG6 1647 aa16.77■□□□□ 0.27
SLC3A2-217ENST00000541425 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.27
SLC3A2-217ENST00000541425 RIMS1Q86UR5 1692 aaKnown RBP16.76■□□□□ 0.27
SLC3A2-217ENST00000541425 ABCC5O15440 1437 aa16.76■□□□□ 0.27
SLC3A2-217ENST00000541425 AGLP35573 1532 aa16.75■□□□□ 0.27
SLC3A2-217ENST00000541425 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
SLC3A2-217ENST00000541425 PLXNC1O60486 1568 aa16.73■□□□□ 0.27
SLC3A2-217ENST00000541425 ESF1Q9H501 851 aaKnown RBP16.73■□□□□ 0.27
SLC3A2-217ENST00000541425 CHIC2Q9UKJ5 165 aa16.73■□□□□ 0.27
SLC3A2-217ENST00000541425 ITGAEP38570 1179 aa16.72■□□□□ 0.27
SLC3A2-217ENST00000541425 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
SLC3A2-217ENST00000541425 DHX29Q7Z478 1369 aaKnown RBP16.71■□□□□ 0.27
SLC3A2-217ENST00000541425 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
SLC3A2-217ENST00000541425 ANKRD30AQ9BXX3 1397 aa16.69■□□□□ 0.26
SLC3A2-217ENST00000541425 GGT6Q6P531 493 aa16.69■□□□□ 0.26
SLC3A2-217ENST00000541425 PTPRMP28827 1452 aa16.68■□□□□ 0.26
SLC3A2-217ENST00000541425 KIF3BO15066 747 aa16.68■□□□□ 0.26
SLC3A2-217ENST00000541425 DUOX2Q9NRD8 1548 aa16.68■□□□□ 0.26
SLC3A2-217ENST00000541425 KIF15Q9NS87 1388 aa16.67■□□□□ 0.26
SLC3A2-217ENST00000541425 RRBP1Q9P2E9 1410 aaKnown RBP16.67■□□□□ 0.26
SLC3A2-217ENST00000541425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.66■□□□□ 0.26
SLC3A2-217ENST00000541425 EIF2AK4Q9P2K8 1649 aaKnown RBP16.66■□□□□ 0.26
SLC3A2-217ENST00000541425 CLTCQ00610 1675 aaKnown RBP16.65■□□□□ 0.26
SLC3A2-217ENST00000541425 ADGRL2O95490 1459 aa16.63■□□□□ 0.25
SLC3A2-217ENST00000541425 NCOA1Q15788 1441 aa16.62■□□□□ 0.25
SLC3A2-217ENST00000541425 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms