RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 LSM11P83369 360 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAP1B-224ENST00000541216 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
RAP1B-224ENST00000541216 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
RAP1B-224ENST00000541216 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
RAP1B-224ENST00000541216 PBX2P40425 430 aa13.16□□□□□ -0.3
RAP1B-224ENST00000541216 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
RAP1B-224ENST00000541216 KHSRPQ92945 711 aaKnown RBP eCLIP13.12□□□□□ -0.313e-8■■■□□ 17.6
RAP1B-224ENST00000541216 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
RAP1B-224ENST00000541216 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
RAP1B-224ENST00000541216 RIOK3O14730 519 aaKnown RBP13.03□□□□□ -0.32
RAP1B-224ENST00000541216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
RAP1B-224ENST00000541216 NUDT7P0C024 238 aa13.01□□□□□ -0.33
RAP1B-224ENST00000541216 NLRP6P59044 892 aa13.01□□□□□ -0.33
RAP1B-224ENST00000541216 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
RAP1B-224ENST00000541216 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
RAP1B-224ENST00000541216 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
RAP1B-224ENST00000541216 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
RAP1B-224ENST00000541216 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
RAP1B-224ENST00000541216 ADGRD1Q6QNK2 874 aa12.95□□□□□ -0.34
RAP1B-224ENST00000541216 ARHGAP33O14559 1287 aa12.93□□□□□ -0.34
RAP1B-224ENST00000541216 SLC34A2O95436 690 aa12.93□□□□□ -0.34
RAP1B-224ENST00000541216 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
RAP1B-224ENST00000541216 KIF3CO14782 793 aa12.92□□□□□ -0.34
RAP1B-224ENST00000541216 PCDHGA4Q9Y5G9 962 aa12.92□□□□□ -0.34
RAP1B-224ENST00000541216 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
RAP1B-224ENST00000541216 TK2O00142 265 aa12.89□□□□□ -0.35
RAP1B-224ENST00000541216 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
RAP1B-224ENST00000541216 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
RAP1B-224ENST00000541216 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
RAP1B-224ENST00000541216 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
RAP1B-224ENST00000541216 RGS20O76081 388 aa12.82□□□□□ -0.36
RAP1B-224ENST00000541216 HRO43593 1189 aa12.81□□□□□ -0.36
RAP1B-224ENST00000541216 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
RAP1B-224ENST00000541216 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
RAP1B-224ENST00000541216 KCTD12Q96CX2 325 aaKnown RBP12.79□□□□□ -0.36
RAP1B-224ENST00000541216 MFRPQ9BY79 579 aa12.77□□□□□ -0.37
RAP1B-224ENST00000541216 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
RAP1B-224ENST00000541216 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
RAP1B-224ENST00000541216 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
RAP1B-224ENST00000541216 PSEN2P49810 448 aa12.73□□□□□ -0.37
RAP1B-224ENST00000541216 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
RAP1B-224ENST00000541216 IFFO2Q5TF58 517 aa12.71□□□□□ -0.37
RAP1B-224ENST00000541216 KCNH8Q96L42 1107 aa12.71□□□□□ -0.37
RAP1B-224ENST00000541216 KDM4FA0A1W2PPD8 638 aa12.68□□□□□ -0.38
RAP1B-224ENST00000541216 PTCD2Q8WV60 388 aaKnown RBP12.67□□□□□ -0.38
RAP1B-224ENST00000541216 STK25O00506 426 aa12.65□□□□□ -0.38
RAP1B-224ENST00000541216 PTPN5P54829 565 aa12.65□□□□□ -0.38
RAP1B-224ENST00000541216 TBC1D12O60347 775 aa12.61□□□□□ -0.39
RAP1B-224ENST00000541216 A0A0G2JS52 829 aa12.59□□□□□ -0.39
RAP1B-224ENST00000541216 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
RAP1B-224ENST00000541216 VPS9D1Q9Y2B5 631 aa12.57□□□□□ -0.4
RAP1B-224ENST00000541216 FOXK1P85037 733 aa12.54□□□□□ -0.4
RAP1B-224ENST00000541216 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
RAP1B-224ENST00000541216 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
RAP1B-224ENST00000541216 THSD4Q6ZMP0 1018 aa12.52□□□□□ -0.41
RAP1B-224ENST00000541216 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
RAP1B-224ENST00000541216 PPP1R37O75864 691 aa12.46□□□□□ -0.41
RAP1B-224ENST00000541216 WNT2BQ93097 391 aa12.46□□□□□ -0.41
RAP1B-224ENST00000541216 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
RAP1B-224ENST00000541216 BHMG1C9JSJ3 638 aaPredicted RBP12.45□□□□□ -0.42
RAP1B-224ENST00000541216 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
RAP1B-224ENST00000541216 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
RAP1B-224ENST00000541216 Q6ZNB5 142 aa12.42□□□□□ -0.42
RAP1B-224ENST00000541216 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
RAP1B-224ENST00000541216 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
RAP1B-224ENST00000541216 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
RAP1B-224ENST00000541216 PTPREP23469 700 aa12.4□□□□□ -0.42
RAP1B-224ENST00000541216 DSG2Q14126 1118 aa12.4□□□□□ -0.42
RAP1B-224ENST00000541216 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
RAP1B-224ENST00000541216 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
RAP1B-224ENST00000541216 ZBED2Q9BTP6 218 aa12.36□□□□□ -0.43
RAP1B-224ENST00000541216 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
RAP1B-224ENST00000541216 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
RAP1B-224ENST00000541216 FOSBP53539 338 aa12.32□□□□□ -0.44
RAP1B-224ENST00000541216 LAPTM4AQ15012 233 aa12.29□□□□□ -0.44
RAP1B-224ENST00000541216 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAP1B-224ENST00000541216 RGL2O15211 777 aa12.27□□□□□ -0.45
RAP1B-224ENST00000541216 ANKK1Q8NFD2 765 aa12.26□□□□□ -0.45
RAP1B-224ENST00000541216 JPH4Q96JJ6 628 aa12.25□□□□□ -0.45
RAP1B-224ENST00000541216 NYAP1Q6ZVC0 841 aa12.24□□□□□ -0.45
RAP1B-224ENST00000541216 ZDHHC16Q969W1 377 aa12.24□□□□□ -0.45
RAP1B-224ENST00000541216 PKD2Q13563 968 aa12.23□□□□□ -0.45
RAP1B-224ENST00000541216 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.45
RAP1B-224ENST00000541216 RABGEF1Q9UJ41 708 aa12.2□□□□□ -0.46
RAP1B-224ENST00000541216 KCNC4Q03721 635 aa12.19□□□□□ -0.46
RAP1B-224ENST00000541216 ADAM33Q9BZ11 813 aa12.19□□□□□ -0.46
RAP1B-224ENST00000541216 TRAF7Q6Q0C0 670 aa12.18□□□□□ -0.46
RAP1B-224ENST00000541216 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
RAP1B-224ENST00000541216 PPP1R3GB7ZBB8 358 aa12.15□□□□□ -0.46
RAP1B-224ENST00000541216 PPP1R15BQ5SWA1 713 aa12.15□□□□□ -0.46
RAP1B-224ENST00000541216 LAPTM4BQ86VI4 370 aa12.15□□□□□ -0.46
RAP1B-224ENST00000541216 EVI5O60447 810 aa12.14□□□□□ -0.47
RAP1B-224ENST00000541216 BCAMP50895 628 aa12.14□□□□□ -0.47
RAP1B-224ENST00000541216 GFRA3O60609 400 aa12.12□□□□□ -0.47
RAP1B-224ENST00000541216 CRISPLD2Q9H0B8 497 aa12.12□□□□□ -0.47
RAP1B-224ENST00000541216 PROX2Q3B8N5 592 aa12.08□□□□□ -0.48
RAP1B-224ENST00000541216 HS6ST3Q8IZP7 471 aa12.08□□□□□ -0.48
RAP1B-224ENST00000541216 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
RAP1B-224ENST00000541216 WBP1LQ9NX94 342 aa12.07□□□□□ -0.48
RAP1B-224ENST00000541216 LCE2BO14633 110 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms