RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
TTR-203ENST00000541025 NKX1-1Q15270 411 aaPredicted RBP14.2□□□□□ -0.14
TTR-203ENST00000541025 RIMBP2O15034 1052 aa14.19□□□□□ -0.14
TTR-203ENST00000541025 MARVELD3Q96A59 401 aa14.18□□□□□ -0.14
TTR-203ENST00000541025 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
TTR-203ENST00000541025 KIF3CO14782 793 aa14.16□□□□□ -0.14
TTR-203ENST00000541025 CDAN1Q8IWY9 1227 aa14.16□□□□□ -0.14
TTR-203ENST00000541025 HOXB1P14653 301 aaPredicted RBP14.15□□□□□ -0.14
TTR-203ENST00000541025 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
TTR-203ENST00000541025 C2orf72A6NCS6 295 aa14.14□□□□□ -0.15
TTR-203ENST00000541025 EMP3P54852 163 aa14.14□□□□□ -0.15
TTR-203ENST00000541025 TMC2Q8TDI7 906 aa14.13□□□□□ -0.15
TTR-203ENST00000541025 FAM205CA6NFA0 338 aa14.06□□□□□ -0.16
TTR-203ENST00000541025 GTPBP6O43824 516 aaPredicted RBP14.06□□□□□ -0.16
TTR-203ENST00000541025 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
TTR-203ENST00000541025 PLSCR2Q9NRY7 297 aa14.05□□□□□ -0.16
TTR-203ENST00000541025 HS3ST6Q96QI5 342 aa14.03□□□□□ -0.16
TTR-203ENST00000541025 GPHNQ9NQX3 736 aaPredicted RBP14.03□□□□□ -0.16
TTR-203ENST00000541025 RTN4Q9NQC3 1192 aaKnown RBP14.02□□□□□ -0.17
TTR-203ENST00000541025 SLC34A2O95436 690 aa14.01□□□□□ -0.17
TTR-203ENST00000541025 ERBB3P21860 1342 aa14□□□□□ -0.17
TTR-203ENST00000541025 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
TTR-203ENST00000541025 POTEB3A0JP26 581 aa13.98□□□□□ -0.17
TTR-203ENST00000541025 FOXK1P85037 733 aa13.98□□□□□ -0.17
TTR-203ENST00000541025 POTEBQ6S5H4 581 aa13.98□□□□□ -0.17
TTR-203ENST00000541025 BBXQ8WY36 941 aaPredicted RBP13.95□□□□□ -0.18
TTR-203ENST00000541025 PLPP6Q8IY26 295 aa13.94□□□□□ -0.18
TTR-203ENST00000541025 PDE4AP27815 886 aa13.92□□□□□ -0.18
TTR-203ENST00000541025 PCDHGA4Q9Y5G9 962 aa13.91□□□□□ -0.18
TTR-203ENST00000541025 DSG2Q14126 1118 aa13.9□□□□□ -0.18
TTR-203ENST00000541025 CRISPLD2Q9H0B8 497 aa13.9□□□□□ -0.18
TTR-203ENST00000541025 VARS2Q5ST30 1063 aaKnown RBP13.89□□□□□ -0.19
TTR-203ENST00000541025 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.19
TTR-203ENST00000541025 PTCD2Q8WV60 388 aaKnown RBP13.88□□□□□ -0.19
TTR-203ENST00000541025 ZNF316A6NFI3 1004 aaPredicted RBP13.87□□□□□ -0.19
TTR-203ENST00000541025 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
TTR-203ENST00000541025 KRTAP3-3Q9BYR6 98 aa13.85□□□□□ -0.19
TTR-203ENST00000541025 KRTAP3-2Q9BYR7 98 aa13.85□□□□□ -0.19
TTR-203ENST00000541025 TBC1D12O60347 775 aa13.84□□□□□ -0.19
TTR-203ENST00000541025 NUDT7P0C024 238 aa13.84□□□□□ -0.19
TTR-203ENST00000541025 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
TTR-203ENST00000541025 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
TTR-203ENST00000541025 PPP1R15BQ5SWA1 713 aa13.81□□□□□ -0.2
TTR-203ENST00000541025 SPNS2Q8IVW8 549 aa13.8□□□□□ -0.2
TTR-203ENST00000541025 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
TTR-203ENST00000541025 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
TTR-203ENST00000541025 LHX6Q9UPM6 363 aa13.78□□□□□ -0.2
TTR-203ENST00000541025 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
TTR-203ENST00000541025 OXER1Q8TDS5 423 aa13.76□□□□□ -0.21
TTR-203ENST00000541025 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
TTR-203ENST00000541025 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
TTR-203ENST00000541025 PSDA5PKW4 1024 aaPredicted RBP13.75□□□□□ -0.21
TTR-203ENST00000541025 MFSD10Q14728 455 aa13.75□□□□□ -0.21
TTR-203ENST00000541025 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
TTR-203ENST00000541025 MMRN1Q13201 1228 aa13.7□□□□□ -0.22
TTR-203ENST00000541025 PBX2P40425 430 aa13.68□□□□□ -0.22
TTR-203ENST00000541025 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
TTR-203ENST00000541025 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
TTR-203ENST00000541025 CFAP44Q96MT7 982 aa13.64□□□□□ -0.23
TTR-203ENST00000541025 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
TTR-203ENST00000541025 PPP4R3BQ5MIZ7 849 aa13.61□□□□□ -0.23
TTR-203ENST00000541025 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
TTR-203ENST00000541025 LSM11P83369 360 aaKnown RBP eCLIP13.59□□□□□ -0.23
TTR-203ENST00000541025 ARHGAP33O14559 1287 aa13.58□□□□□ -0.24
TTR-203ENST00000541025 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.24
TTR-203ENST00000541025 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
TTR-203ENST00000541025 EMILIN3Q9NT22 766 aa13.58□□□□□ -0.24
TTR-203ENST00000541025 EVI5O60447 810 aa13.57□□□□□ -0.24
TTR-203ENST00000541025 PTGER2P43116 358 aa13.56□□□□□ -0.24
TTR-203ENST00000541025 CAMK2BQ13554 666 aa13.56□□□□□ -0.24
TTR-203ENST00000541025 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
TTR-203ENST00000541025 FOSBP53539 338 aa13.51□□□□□ -0.25
TTR-203ENST00000541025 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
TTR-203ENST00000541025 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
TTR-203ENST00000541025 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
TTR-203ENST00000541025 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
TTR-203ENST00000541025 TK2O00142 265 aa13.47□□□□□ -0.25
TTR-203ENST00000541025 PSEN2P49810 448 aa13.46□□□□□ -0.25
TTR-203ENST00000541025 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.25
TTR-203ENST00000541025 WDR70Q9NW82 654 aa13.46□□□□□ -0.25
TTR-203ENST00000541025 RNF166Q96A37 237 aaPredicted RBP13.45□□□□□ -0.26
TTR-203ENST00000541025 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
TTR-203ENST00000541025 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
TTR-203ENST00000541025 ZDHHC16Q969W1 377 aa13.43□□□□□ -0.26
TTR-203ENST00000541025 DPYSL4O14531 572 aa13.42□□□□□ -0.26
TTR-203ENST00000541025 ABCC9O60706 1549 aa13.41□□□□□ -0.26
TTR-203ENST00000541025 E2F4Q16254 413 aa13.41□□□□□ -0.26
TTR-203ENST00000541025 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
TTR-203ENST00000541025 PTPREP23469 700 aa13.4□□□□□ -0.26
TTR-203ENST00000541025 PHF14O94880 888 aa13.38□□□□□ -0.27
TTR-203ENST00000541025 SLC4A5Q9BY07 1137 aa13.38□□□□□ -0.27
TTR-203ENST00000541025 PCDHGA10Q9Y5H3 936 aa13.38□□□□□ -0.27
TTR-203ENST00000541025 ADAM33Q9BZ11 813 aa13.37□□□□□ -0.27
TTR-203ENST00000541025 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
TTR-203ENST00000541025 HRO43593 1189 aa13.36□□□□□ -0.27
TTR-203ENST00000541025 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
TTR-203ENST00000541025 TYW1BQ6NUM6 668 aa13.35□□□□□ -0.27
TTR-203ENST00000541025 EPAS1Q99814 870 aa13.35□□□□□ -0.27
TTR-203ENST00000541025 ARIH1Q9Y4X5 557 aaPredicted RBP13.35□□□□□ -0.27
TTR-203ENST00000541025 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms