RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 ZMYM4Q5VZL5 1548 aa33.83■■■■□ 3.01
PTMS-205ENST00000540828 POGZQ7Z3K3 1410 aa33.82■■■■□ 3
PTMS-205ENST00000540828 MAGI2Q86UL8 1455 aa33.8■■■■□ 3
PTMS-205ENST00000540828 CDC42BPBQ9Y5S2 1711 aa33.78■■■■□ 3
PTMS-205ENST00000540828 ARHGEF40Q8TER5 1519 aa33.78■■■■□ 3
PTMS-205ENST00000540828 YEATS2Q9ULM3 1422 aa33.75■■■□□ 2.99
PTMS-205ENST00000540828 ARID4BQ4LE39 1312 aaPredicted RBP33.75■■■□□ 2.99
PTMS-205ENST00000540828 ZFYVE16Q7Z3T8 1539 aa33.74■■■□□ 2.99
PTMS-205ENST00000540828 PREX2Q70Z35 1606 aa33.73■■■□□ 2.99
PTMS-205ENST00000540828 AFAP1Q8N556 730 aa33.72■■■□□ 2.99
PTMS-205ENST00000540828 MTUS2Q5JR59 1369 aa33.72■■■□□ 2.99
PTMS-205ENST00000540828 ZNF518AQ6AHZ1 1483 aa33.69■■■□□ 2.98
PTMS-205ENST00000540828 CDC42BPAQ5VT25 1732 aa33.68■■■□□ 2.98
PTMS-205ENST00000540828 GPATCH8Q9UKJ3 1502 aaKnown RBP33.68■■■□□ 2.98
PTMS-205ENST00000540828 ADAMTSL3P82987 1691 aa33.68■■■□□ 2.98
PTMS-205ENST00000540828 BCORL1Q5H9F3 1711 aa33.65■■■□□ 2.98
PTMS-205ENST00000540828 ARHGEF12Q9NZN5 1544 aa33.63■■■□□ 2.97
PTMS-205ENST00000540828 KDM5CP41229 1560 aa33.62■■■□□ 2.97
PTMS-205ENST00000540828 ATP10AO60312 1499 aa33.62■■■□□ 2.97
PTMS-205ENST00000540828 CCNB3Q8WWL7 1395 aa33.61■■■□□ 2.97
PTMS-205ENST00000540828 ZNF777Q9ULD5 760 aaPredicted RBP33.61■■■□□ 2.97
PTMS-205ENST00000540828 ABCC1P33527 1531 aa33.61■■■□□ 2.97
PTMS-205ENST00000540828 TRAPPC8Q9Y2L5 1435 aa33.61■■■□□ 2.97
PTMS-205ENST00000540828 VPS8Q8N3P4 1428 aa33.6■■■□□ 2.97
PTMS-205ENST00000540828 CFDP1Q9UEE9 299 aaPredicted RBP33.59■■■□□ 2.97
PTMS-205ENST00000540828 EHBP1L1Q8N3D4 1523 aa33.57■■■□□ 2.96
PTMS-205ENST00000540828 PTPRMP28827 1452 aa33.56■■■□□ 2.96
PTMS-205ENST00000540828 MLH3Q9UHC1 1453 aa33.56■■■□□ 2.96
PTMS-205ENST00000540828 MYT1LQ9UL68 1186 aa33.55■■■□□ 2.96
PTMS-205ENST00000540828 SIGLEC1Q9BZZ2 1709 aa33.55■■■□□ 2.96
PTMS-205ENST00000540828 C9orf84Q5VXU9 1444 aa33.54■■■□□ 2.96
PTMS-205ENST00000540828 ITSN2Q9NZM3 1697 aa33.53■■■□□ 2.96
PTMS-205ENST00000540828 SAMD9LQ8IVG5 1584 aa33.52■■■□□ 2.96
PTMS-205ENST00000540828 MADDQ8WXG6 1647 aa33.51■■■□□ 2.96
PTMS-205ENST00000540828 HNRNPMP52272 730 aaKnown RBP eCLIP33.51■■■□□ 2.95
PTMS-205ENST00000540828 HECW2Q9P2P5 1572 aa33.51■■■□□ 2.95
PTMS-205ENST00000540828 KIAA1107Q9UPP5 1409 aa33.5■■■□□ 2.95
PTMS-205ENST00000540828 MLECQ14165 292 aa33.49■■■□□ 2.95
PTMS-205ENST00000540828 TIAM1Q13009 1591 aa33.47■■■□□ 2.95
PTMS-205ENST00000540828 PLEKHH2Q8IVE3 1493 aa33.47■■■□□ 2.95
PTMS-205ENST00000540828 DIP2CQ9Y2E4 1556 aa33.45■■■□□ 2.95
PTMS-205ENST00000540828 SYCP2Q9BX26 1530 aa33.44■■■□□ 2.94
PTMS-205ENST00000540828 ZNF644Q9H582 1327 aaPredicted RBP33.41■■■□□ 2.94
PTMS-205ENST00000540828 NCOA2Q15596 1464 aa33.41■■■□□ 2.94
PTMS-205ENST00000540828 REREQ9P2R6 1566 aa33.4■■■□□ 2.94
PTMS-205ENST00000540828 SPAG9O60271 1321 aaKnown RBP33.4■■■□□ 2.94
PTMS-205ENST00000540828 RIMS1Q86UR5 1692 aaKnown RBP33.39■■■□□ 2.94
PTMS-205ENST00000540828 ABCA6Q8N139 1617 aa33.39■■■□□ 2.94
PTMS-205ENST00000540828 MAP3K1Q13233 1512 aa33.39■■■□□ 2.94
PTMS-205ENST00000540828 KIDINS220Q9ULH0 1771 aa33.39■■■□□ 2.94
PTMS-205ENST00000540828 SUPT6HQ7KZ85 1726 aaKnown RBP33.38■■■□□ 2.93
PTMS-205ENST00000540828 LRRC9Q6ZRR7 1453 aa33.37■■■□□ 2.93
PTMS-205ENST00000540828 KANK4Q5T7N3 995 aaPredicted RBP33.34■■■□□ 2.93
PTMS-205ENST00000540828 AGLP35573 1532 aa33.33■■■□□ 2.93
PTMS-205ENST00000540828 MBD5Q9P267 1494 aa33.31■■■□□ 2.92
PTMS-205ENST00000540828 FER1L4A9Z1Z3 1794 aa33.29■■■□□ 2.92
PTMS-205ENST00000540828 PLPPR3Q6T4P5 718 aa33.26■■■□□ 2.91
PTMS-205ENST00000540828 ATP7AQ04656 1500 aa33.26■■■□□ 2.91
PTMS-205ENST00000540828 INO80Q9ULG1 1556 aaPredicted RBP33.23■■■□□ 2.91
PTMS-205ENST00000540828 RSPH4AQ5TD94 716 aa33.23■■■□□ 2.91
PTMS-205ENST00000540828 APLP2Q06481 763 aa33.22■■■□□ 2.91
PTMS-205ENST00000540828 CAMSAP2Q08AD1 1489 aa33.2■■■□□ 2.91
PTMS-205ENST00000540828 RTEL1-TNFRSF6BF6WH68 1400 aa33.19■■■□□ 2.9
PTMS-205ENST00000540828 CEBPAP49715 358 aaPredicted RBP33.18■■■□□ 2.9
PTMS-205ENST00000540828 A2MP01023 1474 aa33.17■■■□□ 2.9
PTMS-205ENST00000540828 LMTK3Q96Q04 1460 aa33.16■■■□□ 2.9
PTMS-205ENST00000540828 CCDC141Q6ZP82 1450 aa33.14■■■□□ 2.9
PTMS-205ENST00000540828 ESF1Q9H501 851 aaKnown RBP33.14■■■□□ 2.9
PTMS-205ENST00000540828 PLXNC1O60486 1568 aa33.11■■■□□ 2.89
PTMS-205ENST00000540828 MYOM3Q5VTT5 1437 aa33.11■■■□□ 2.89
PTMS-205ENST00000540828 MIA2Q96PC5 1412 aa33.11■■■□□ 2.89
PTMS-205ENST00000540828 ARHGEF5Q12774 1597 aa33.08■■■□□ 2.89
PTMS-205ENST00000540828 TSPY4P0CV99 314 aa33.07■■■□□ 2.88
PTMS-205ENST00000540828 TSPY10P0CW01 314 aa33.07■■■□□ 2.88
PTMS-205ENST00000540828 CNTLNQ9NXG0 1405 aa33.07■■■□□ 2.88
PTMS-205ENST00000540828 ADGBQ8N7X0 1667 aa33.07■■■□□ 2.88
PTMS-205ENST00000540828 DHX29Q7Z478 1369 aaKnown RBP33.06■■■□□ 2.88
PTMS-205ENST00000540828 HSPA2P54652 639 aa33.03■■■□□ 2.88
PTMS-205ENST00000540828 GGT6Q6P531 493 aa33.02■■■□□ 2.88
PTMS-205ENST00000540828 SETD1BQ9UPS6 1966 aaKnown RBP33.01■■■□□ 2.87
PTMS-205ENST00000540828 PPP6R1Q9UPN7 881 aa33■■■□□ 2.87
PTMS-205ENST00000540828 C3P01024 1663 aa32.99■■■□□ 2.87
PTMS-205ENST00000540828 ZMYM3Q14202 1370 aa32.97■■■□□ 2.87
PTMS-205ENST00000540828 PREX1Q8TCU6 1659 aa32.93■■■□□ 2.86
PTMS-205ENST00000540828 KIF3BO15066 747 aa32.92■■■□□ 2.86
PTMS-205ENST00000540828 MROH2AA6NES4 1674 aa32.91■■■□□ 2.86
PTMS-205ENST00000540828 MAST1Q9Y2H9 1570 aa32.91■■■□□ 2.86
PTMS-205ENST00000540828 UHRF1BP1Q6BDS2 1440 aa32.9■■■□□ 2.86
PTMS-205ENST00000540828 NPATQ14207 1427 aa32.86■■■□□ 2.85
PTMS-205ENST00000540828 FGD6Q6ZV73 1430 aa32.86■■■□□ 2.85
PTMS-205ENST00000540828 CLTCQ00610 1675 aaKnown RBP32.86■■■□□ 2.85
PTMS-205ENST00000540828 PTPN23Q9H3S7 1636 aa32.86■■■□□ 2.85
PTMS-205ENST00000540828 ABCC5O15440 1437 aa32.83■■■□□ 2.85
PTMS-205ENST00000540828 TCOF1Q13428 1488 aaKnown RBP32.82■■■□□ 2.84
PTMS-205ENST00000540828 PTPRKQ15262 1439 aa32.79■■■□□ 2.84
PTMS-205ENST00000540828 WASHC2CQ9Y4E1 1318 aa32.76■■■□□ 2.83
PTMS-205ENST00000540828 SHANK2Q9UPX8 1470 aa32.75■■■□□ 2.83
PTMS-205ENST00000540828 DAPK1P53355 1430 aa32.75■■■□□ 2.83
PTMS-205ENST00000540828 FAM135AQ9P2D6 1515 aa32.74■■■□□ 2.83
PTMS-205ENST00000540828 KDM5DQ9BY66 1539 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms