RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	POGZ	Q7Z3K3	1410 aa		31.78	■■■□□ 2.68
RAP1B-222	ENST00000540781	CDC42BPB	Q9Y5S2	1711 aa		31.78	■■■□□ 2.68
RAP1B-222	ENST00000540781	ZMYM4	Q5VZL5	1548 aa		31.77	■■■□□ 2.68
RAP1B-222	ENST00000540781	ARHGEF40	Q8TER5	1519 aa		31.75	■■■□□ 2.67
RAP1B-222	ENST00000540781	PREX2	Q70Z35	1606 aa		31.75	■■■□□ 2.67
RAP1B-222	ENST00000540781	MTUS2	Q5JR59	1369 aa		31.75	■■■□□ 2.67
RAP1B-222	ENST00000540781	MAGI2	Q86UL8	1455 aa		31.72	■■■□□ 2.67
RAP1B-222	ENST00000540781	ZFYVE16	Q7Z3T8	1539 aa		31.71	■■■□□ 2.67
RAP1B-222	ENST00000540781	CDC42BPA	Q5VT25	1732 aa		31.71	■■■□□ 2.67
RAP1B-222	ENST00000540781	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.71	■■■□□ 2.67
RAP1B-222	ENST00000540781	YEATS2	Q9ULM3	1422 aa		31.68	■■■□□ 2.66
RAP1B-222	ENST00000540781	VPS8	Q8N3P4	1428 aa		31.66	■■■□□ 2.66
RAP1B-222	ENST00000540781	ZNF518A	Q6AHZ1	1483 aa		31.65	■■■□□ 2.66
RAP1B-222	ENST00000540781	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.65	■■■□□ 2.66
RAP1B-222	ENST00000540781	AFAP1	Q8N556	730 aa		31.65	■■■□□ 2.66
RAP1B-222	ENST00000540781	CCNB3	Q8WWL7	1395 aa		31.64	■■■□□ 2.66
RAP1B-222	ENST00000540781	EHBP1L1	Q8N3D4	1523 aa		31.64	■■■□□ 2.66
RAP1B-222	ENST00000540781	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.63	■■■□□ 2.65
RAP1B-222	ENST00000540781	ABCC1	P33527	1531 aa		31.62	■■■□□ 2.65
RAP1B-222	ENST00000540781	ARHGEF12	Q9NZN5	1544 aa		31.6	■■■□□ 2.65
RAP1B-222	ENST00000540781	BCORL1	Q5H9F3	1711 aa		31.59	■■■□□ 2.65
RAP1B-222	ENST00000540781	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.59	■■■□□ 2.65
RAP1B-222	ENST00000540781	MYT1L	Q9UL68	1186 aa		31.59	■■■□□ 2.65
RAP1B-222	ENST00000540781	ADAMTSL3	P82987	1691 aa		31.59	■■■□□ 2.65
RAP1B-222	ENST00000540781	KDM5C	P41229	1560 aa		31.59	■■■□□ 2.65
RAP1B-222	ENST00000540781	TRAPPC8	Q9Y2L5	1435 aa		31.58	■■■□□ 2.65
RAP1B-222	ENST00000540781	ITSN2	Q9NZM3	1697 aa		31.57	■■■□□ 2.65
RAP1B-222	ENST00000540781	ATP10A	O60312	1499 aa		31.56	■■■□□ 2.64
RAP1B-222	ENST00000540781	TIAM1	Q13009	1591 aa		31.56	■■■□□ 2.64
RAP1B-222	ENST00000540781	SAMD9L	Q8IVG5	1584 aa		31.55	■■■□□ 2.64
RAP1B-222	ENST00000540781	HECW2	Q9P2P5	1572 aa		31.52	■■■□□ 2.64
RAP1B-222	ENST00000540781	C9orf84	Q5VXU9	1444 aa		31.51	■■■□□ 2.64
RAP1B-222	ENST00000540781	SIGLEC1	Q9BZZ2	1709 aa		31.51	■■■□□ 2.63
RAP1B-222	ENST00000540781	MLH3	Q9UHC1	1453 aa		31.5	■■■□□ 2.63
RAP1B-222	ENST00000540781	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.49	■■■□□ 2.63
RAP1B-222	ENST00000540781	SYCP2	Q9BX26	1530 aa		31.49	■■■□□ 2.63
RAP1B-222	ENST00000540781	MADD	Q8WXG6	1647 aa		31.48	■■■□□ 2.63
RAP1B-222	ENST00000540781	PTPRM	P28827	1452 aa		31.47	■■■□□ 2.63
RAP1B-222	ENST00000540781	PLEKHH2	Q8IVE3	1493 aa		31.47	■■■□□ 2.63
RAP1B-222	ENST00000540781	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.47	■■■□□ 2.63
RAP1B-222	ENST00000540781	NCOA2	Q15596	1464 aa		31.46	■■■□□ 2.63
RAP1B-222	ENST00000540781	MLEC	Q14165	292 aa		31.46	■■■□□ 2.63
RAP1B-222	ENST00000540781	KIAA1107	Q9UPP5	1409 aa		31.46	■■■□□ 2.63
RAP1B-222	ENST00000540781	DIP2C	Q9Y2E4	1556 aa		31.44	■■■□□ 2.62
RAP1B-222	ENST00000540781	LRRC9	Q6ZRR7	1453 aa		31.43	■■■□□ 2.62
RAP1B-222	ENST00000540781	MAP3K1	Q13233	1512 aa		31.42	■■■□□ 2.62
RAP1B-222	ENST00000540781	ABCA6	Q8N139	1617 aa		31.42	■■■□□ 2.62
RAP1B-222	ENST00000540781	ZNF644	Q9H582	1327 aa	Predicted RBP	31.41	■■■□□ 2.62
RAP1B-222	ENST00000540781	SPAG9	O60271	1321 aa	Known RBP	31.4	■■■□□ 2.62
RAP1B-222	ENST00000540781	RIMS1	Q86UR5	1692 aa	Known RBP	31.39	■■■□□ 2.62
RAP1B-222	ENST00000540781	KIDINS220	Q9ULH0	1771 aa		31.39	■■■□□ 2.62
RAP1B-222	ENST00000540781	KANK4	Q5T7N3	995 aa	Predicted RBP	31.37	■■■□□ 2.61
RAP1B-222	ENST00000540781	RERE	Q9P2R6	1566 aa		31.36	■■■□□ 2.61
RAP1B-222	ENST00000540781	APLP2	Q06481	763 aa		31.35	■■■□□ 2.61
RAP1B-222	ENST00000540781	FER1L4	A9Z1Z3	1794 aa		31.3	■■■□□ 2.6
RAP1B-222	ENST00000540781	ATP7A	Q04656	1500 aa		31.29	■■■□□ 2.6
RAP1B-222	ENST00000540781	MBD5	Q9P267	1494 aa		31.29	■■■□□ 2.6
RAP1B-222	ENST00000540781	PLPPR3	Q6T4P5	718 aa		31.28	■■■□□ 2.6
RAP1B-222	ENST00000540781	AGL	P35573	1532 aa		31.28	■■■□□ 2.6
RAP1B-222	ENST00000540781	CAMSAP2	Q08AD1	1489 aa		31.27	■■■□□ 2.6
RAP1B-222	ENST00000540781	INO80	Q9ULG1	1556 aa	Predicted RBP	31.26	■■■□□ 2.6
RAP1B-222	ENST00000540781	RSPH4A	Q5TD94	716 aa		31.2	■■■□□ 2.59
RAP1B-222	ENST00000540781	CCDC141	Q6ZP82	1450 aa		31.19	■■■□□ 2.58
RAP1B-222	ENST00000540781	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.17	■■■□□ 2.58
RAP1B-222	ENST00000540781	MYOM3	Q5VTT5	1437 aa		31.17	■■■□□ 2.58
RAP1B-222	ENST00000540781	A2M	P01023	1474 aa		31.17	■■■□□ 2.58
RAP1B-222	ENST00000540781	ESF1	Q9H501	851 aa	Known RBP	31.16	■■■□□ 2.58
RAP1B-222	ENST00000540781	MIA2	Q96PC5	1412 aa		31.14	■■■□□ 2.58
RAP1B-222	ENST00000540781	CEBPA	P49715	358 aa	Predicted RBP	31.13	■■■□□ 2.57
RAP1B-222	ENST00000540781	ARHGEF5	Q12774	1597 aa		31.13	■■■□□ 2.57
RAP1B-222	ENST00000540781	ADGB	Q8N7X0	1667 aa		31.13	■■■□□ 2.57
RAP1B-222	ENST00000540781	PLXNC1	O60486	1568 aa		31.11	■■■□□ 2.57
RAP1B-222	ENST00000540781	TSPY4	P0CV99	314 aa		31.1	■■■□□ 2.57
RAP1B-222	ENST00000540781	TSPY10	P0CW01	314 aa		31.1	■■■□□ 2.57
RAP1B-222	ENST00000540781	LMTK3	Q96Q04	1460 aa		31.08	■■■□□ 2.57
RAP1B-222	ENST00000540781	CNTLN	Q9NXG0	1405 aa		31.05	■■■□□ 2.56
RAP1B-222	ENST00000540781	DHX29	Q7Z478	1369 aa	Known RBP	31.05	■■■□□ 2.56
RAP1B-222	ENST00000540781	GGT6	Q6P531	493 aa		31.03	■■■□□ 2.56
RAP1B-222	ENST00000540781	C3	P01024	1663 aa		31	■■■□□ 2.55
RAP1B-222	ENST00000540781	HSPA2	P54652	639 aa		30.97	■■■□□ 2.55
RAP1B-222	ENST00000540781	PTPN23	Q9H3S7	1636 aa		30.97	■■■□□ 2.55
RAP1B-222	ENST00000540781	MAST1	Q9Y2H9	1570 aa		30.96	■■■□□ 2.55
RAP1B-222	ENST00000540781	FGD6	Q6ZV73	1430 aa		30.96	■■■□□ 2.55
RAP1B-222	ENST00000540781	KIF3B	O15066	747 aa		30.95	■■■□□ 2.55
RAP1B-222	ENST00000540781	PREX1	Q8TCU6	1659 aa		30.94	■■■□□ 2.54
RAP1B-222	ENST00000540781	SETD1B	Q9UPS6	1966 aa	Known RBP	30.94	■■■□□ 2.54
RAP1B-222	ENST00000540781	PPP6R1	Q9UPN7	881 aa		30.94	■■■□□ 2.54
RAP1B-222	ENST00000540781	MROH2A	A6NES4	1674 aa		30.93	■■■□□ 2.54
RAP1B-222	ENST00000540781	ZMYM3	Q14202	1370 aa		30.92	■■■□□ 2.54
RAP1B-222	ENST00000540781	CLTC	Q00610	1675 aa	Known RBP	30.92	■■■□□ 2.54
RAP1B-222	ENST00000540781	TCOF1	Q13428	1488 aa	Known RBP	30.89	■■■□□ 2.54
RAP1B-222	ENST00000540781	UHRF1BP1	Q6BDS2	1440 aa		30.89	■■■□□ 2.53
RAP1B-222	ENST00000540781	ABCC5	O15440	1437 aa		30.88	■■■□□ 2.53
RAP1B-222	ENST00000540781	SHANK2	Q9UPX8	1470 aa		30.83	■■■□□ 2.53
RAP1B-222	ENST00000540781	DAPK1	P53355	1430 aa		30.83	■■■□□ 2.53
RAP1B-222	ENST00000540781	NPAT	Q14207	1427 aa		30.83	■■■□□ 2.53
RAP1B-222	ENST00000540781	CROCC2	H7BZ55	1655 aa		30.82	■■■□□ 2.52
RAP1B-222	ENST00000540781	DNMT1	P26358	1616 aa	Known RBP	30.82	■■■□□ 2.52
RAP1B-222	ENST00000540781	WASHC2C	Q9Y4E1	1318 aa		30.77	■■■□□ 2.52
RAP1B-222	ENST00000540781	FAM50A	Q14320	339 aa	Known RBP	30.77	■■■□□ 2.52

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms