RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 POGZQ7Z3K3 1410 aa27.56■■■□□ 2
CACNA2D4-211ENST00000540728 EFCAB2Q5VUJ9 269 aa27.54■■■□□ 2
CACNA2D4-211ENST00000540728 SCAPERQ9BY12 1400 aa27.54■■■□□ 2
CACNA2D4-211ENST00000540728 BCORL1Q5H9F3 1711 aa27.53■■■□□ 2
CACNA2D4-211ENST00000540728 ADAMTSL3P82987 1691 aa27.52■■■□□ 2
CACNA2D4-211ENST00000540728 CEP162Q5TB80 1403 aa27.52■■■□□ 2
CACNA2D4-211ENST00000540728 HECW2Q9P2P5 1572 aa27.52■■■□□ 2
CACNA2D4-211ENST00000540728 PREX2Q70Z35 1606 aa27.49■■□□□ 1.99
CACNA2D4-211ENST00000540728 YEATS2Q9ULM3 1422 aa27.49■■□□□ 1.99
CACNA2D4-211ENST00000540728 MADDQ8WXG6 1647 aa27.49■■□□□ 1.99
CACNA2D4-211ENST00000540728 MAGI2Q86UL8 1455 aa27.47■■□□□ 1.99
CACNA2D4-211ENST00000540728 CDC42BPBQ9Y5S2 1711 aa27.46■■□□□ 1.99
CACNA2D4-211ENST00000540728 LOC105371045A0A1W2PR82 267 aa27.45■■□□□ 1.98
CACNA2D4-211ENST00000540728 PTPRMP28827 1452 aa27.44■■□□□ 1.98
CACNA2D4-211ENST00000540728 ZNF518AQ6AHZ1 1483 aa27.43■■□□□ 1.98
CACNA2D4-211ENST00000540728 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
CACNA2D4-211ENST00000540728 RIMS1Q86UR5 1692 aaKnown RBP27.41■■□□□ 1.98
CACNA2D4-211ENST00000540728 CDC42BPAQ5VT25 1732 aa27.4■■□□□ 1.98
CACNA2D4-211ENST00000540728 ABCC1P33527 1531 aa27.38■■□□□ 1.97
CACNA2D4-211ENST00000540728 KDM5CP41229 1560 aa27.38■■□□□ 1.97
CACNA2D4-211ENST00000540728 ITSN2Q9NZM3 1697 aa27.36■■□□□ 1.97
CACNA2D4-211ENST00000540728 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
CACNA2D4-211ENST00000540728 C9orf84Q5VXU9 1444 aa27.35■■□□□ 1.97
CACNA2D4-211ENST00000540728 MYT1LQ9UL68 1186 aa27.34■■□□□ 1.97
CACNA2D4-211ENST00000540728 ATP10AO60312 1499 aa27.32■■□□□ 1.96
CACNA2D4-211ENST00000540728 FER1L4A9Z1Z3 1794 aa27.31■■□□□ 1.96
CACNA2D4-211ENST00000540728 MLECQ14165 292 aa27.3■■□□□ 1.96
CACNA2D4-211ENST00000540728 AFAP1Q8N556 730 aa27.3■■□□□ 1.96
CACNA2D4-211ENST00000540728 DIP2CQ9Y2E4 1556 aa27.29■■□□□ 1.96
CACNA2D4-211ENST00000540728 ARHGEF12Q9NZN5 1544 aa27.28■■□□□ 1.96
CACNA2D4-211ENST00000540728 ABCA6Q8N139 1617 aa27.27■■□□□ 1.96
CACNA2D4-211ENST00000540728 EHBP1L1Q8N3D4 1523 aa27.27■■□□□ 1.96
CACNA2D4-211ENST00000540728 SAMD9LQ8IVG5 1584 aa27.26■■□□□ 1.96
CACNA2D4-211ENST00000540728 TRAPPC8Q9Y2L5 1435 aa27.26■■□□□ 1.95
CACNA2D4-211ENST00000540728 SYCP2Q9BX26 1530 aa27.26■■□□□ 1.95
CACNA2D4-211ENST00000540728 CCNB3Q8WWL7 1395 aa27.25■■□□□ 1.95
CACNA2D4-211ENST00000540728 PLPPR3Q6T4P5 718 aa27.25■■□□□ 1.95
CACNA2D4-211ENST00000540728 ZNF777Q9ULD5 760 aaPredicted RBP27.25■■□□□ 1.95
CACNA2D4-211ENST00000540728 GPATCH8Q9UKJ3 1502 aaKnown RBP27.25■■□□□ 1.95
CACNA2D4-211ENST00000540728 VPS8Q8N3P4 1428 aa27.23■■□□□ 1.95
CACNA2D4-211ENST00000540728 MLH3Q9UHC1 1453 aa27.22■■□□□ 1.95
CACNA2D4-211ENST00000540728 CFDP1Q9UEE9 299 aaPredicted RBP27.22■■□□□ 1.95
CACNA2D4-211ENST00000540728 TIAM1Q13009 1591 aa27.19■■□□□ 1.94
CACNA2D4-211ENST00000540728 REREQ9P2R6 1566 aa27.19■■□□□ 1.94
CACNA2D4-211ENST00000540728 KIDINS220Q9ULH0 1771 aa27.17■■□□□ 1.94
CACNA2D4-211ENST00000540728 PLEKHH2Q8IVE3 1493 aa27.15■■□□□ 1.94
CACNA2D4-211ENST00000540728 LMTK3Q96Q04 1460 aa27.15■■□□□ 1.94
CACNA2D4-211ENST00000540728 SUPT6HQ7KZ85 1726 aaKnown RBP27.11■■□□□ 1.93
CACNA2D4-211ENST00000540728 HNRNPMP52272 730 aaKnown RBP eCLIP27.11■■□□□ 1.93
CACNA2D4-211ENST00000540728 KIAA1107Q9UPP5 1409 aa27.1■■□□□ 1.93
CACNA2D4-211ENST00000540728 ATP7AQ04656 1500 aa27.09■■□□□ 1.93
CACNA2D4-211ENST00000540728 INO80Q9ULG1 1556 aaPredicted RBP27.09■■□□□ 1.93
CACNA2D4-211ENST00000540728 AGLP35573 1532 aa27.08■■□□□ 1.93
CACNA2D4-211ENST00000540728 SPAG9O60271 1321 aaKnown RBP27.08■■□□□ 1.93
CACNA2D4-211ENST00000540728 NCOA2Q15596 1464 aa27.06■■□□□ 1.92
CACNA2D4-211ENST00000540728 MAP3K1Q13233 1512 aa27.03■■□□□ 1.92
CACNA2D4-211ENST00000540728 LRRC9Q6ZRR7 1453 aa27.03■■□□□ 1.92
CACNA2D4-211ENST00000540728 APLP2Q06481 763 aa27.02■■□□□ 1.92
CACNA2D4-211ENST00000540728 PREX1Q8TCU6 1659 aa27.01■■□□□ 1.92
CACNA2D4-211ENST00000540728 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
CACNA2D4-211ENST00000540728 ESF1Q9H501 851 aaKnown RBP27■■□□□ 1.91
CACNA2D4-211ENST00000540728 CEBPAP49715 358 aaPredicted RBP26.98■■□□□ 1.91
CACNA2D4-211ENST00000540728 HSPA2P54652 639 aa26.98■■□□□ 1.91
CACNA2D4-211ENST00000540728 C3P01024 1663 aa26.98■■□□□ 1.91
CACNA2D4-211ENST00000540728 CAMSAP2Q08AD1 1489 aa26.97■■□□□ 1.91
CACNA2D4-211ENST00000540728 PLXNC1O60486 1568 aa26.97■■□□□ 1.91
CACNA2D4-211ENST00000540728 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.91
CACNA2D4-211ENST00000540728 A2MP01023 1474 aa26.95■■□□□ 1.91
CACNA2D4-211ENST00000540728 KANK4Q5T7N3 995 aaPredicted RBP26.95■■□□□ 1.9
CACNA2D4-211ENST00000540728 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
CACNA2D4-211ENST00000540728 CNTLNQ9NXG0 1405 aa26.92■■□□□ 1.9
CACNA2D4-211ENST00000540728 RSPH4AQ5TD94 716 aa26.92■■□□□ 1.9
CACNA2D4-211ENST00000540728 CCDC141Q6ZP82 1450 aa26.92■■□□□ 1.9
CACNA2D4-211ENST00000540728 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
CACNA2D4-211ENST00000540728 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
CACNA2D4-211ENST00000540728 MROH2AA6NES4 1674 aa26.88■■□□□ 1.89
CACNA2D4-211ENST00000540728 CLTCQ00610 1675 aaKnown RBP26.86■■□□□ 1.89
CACNA2D4-211ENST00000540728 RTEL1-TNFRSF6BF6WH68 1400 aa26.86■■□□□ 1.89
CACNA2D4-211ENST00000540728 ARHGEF5Q12774 1597 aa26.83■■□□□ 1.89
CACNA2D4-211ENST00000540728 MYOM3Q5VTT5 1437 aa26.82■■□□□ 1.88
CACNA2D4-211ENST00000540728 TSPY4P0CV99 314 aa26.82■■□□□ 1.88
CACNA2D4-211ENST00000540728 TSPY10P0CW01 314 aa26.82■■□□□ 1.88
CACNA2D4-211ENST00000540728 MIA2Q96PC5 1412 aa26.82■■□□□ 1.88
CACNA2D4-211ENST00000540728 SETD1BQ9UPS6 1966 aaKnown RBP26.79■■□□□ 1.88
CACNA2D4-211ENST00000540728 GGT6Q6P531 493 aa26.79■■□□□ 1.88
CACNA2D4-211ENST00000540728 DHX29Q7Z478 1369 aaKnown RBP26.75■■□□□ 1.87
CACNA2D4-211ENST00000540728 NPATQ14207 1427 aa26.74■■□□□ 1.87
CACNA2D4-211ENST00000540728 ZMYM3Q14202 1370 aa26.74■■□□□ 1.87
CACNA2D4-211ENST00000540728 PPP6R1Q9UPN7 881 aa26.72■■□□□ 1.87
CACNA2D4-211ENST00000540728 MYO3AQ8NEV4 1616 aa26.71■■□□□ 1.87
CACNA2D4-211ENST00000540728 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
CACNA2D4-211ENST00000540728 MAST1Q9Y2H9 1570 aa26.69■■□□□ 1.86
CACNA2D4-211ENST00000540728 KDM5DQ9BY66 1539 aa26.67■■□□□ 1.86
CACNA2D4-211ENST00000540728 KIF3BO15066 747 aa26.67■■□□□ 1.86
CACNA2D4-211ENST00000540728 ZNF142P52746 1687 aaPredicted RBP26.65■■□□□ 1.86
CACNA2D4-211ENST00000540728 PTPN23Q9H3S7 1636 aa26.65■■□□□ 1.86
CACNA2D4-211ENST00000540728 PTPRKQ15262 1439 aa26.65■■□□□ 1.86
CACNA2D4-211ENST00000540728 FAM135AQ9P2D6 1515 aa26.64■■□□□ 1.85
CACNA2D4-211ENST00000540728 FBXO41Q8TF61 875 aa26.63■■□□□ 1.85
CACNA2D4-211ENST00000540728 FGD6Q6ZV73 1430 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 321 ms