RNA–Protein interactions for RNA: ENST00000540399.1

LINC02378-201, Transcript of long intergenic non-protein coding RNA 2378, humanhuman

TSL 5 BASIC

Gene LINC02378, Length 1,003 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02378-201ENST00000540399 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
LINC02378-201ENST00000540399 FAM205CA6NFA0 338 aa11.63□□□□□ -0.55
LINC02378-201ENST00000540399 HOXB1P14653 301 aaPredicted RBP11.63□□□□□ -0.55
LINC02378-201ENST00000540399 HS3ST6Q96QI5 342 aa11.63□□□□□ -0.55
LINC02378-201ENST00000540399 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
LINC02378-201ENST00000540399 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
LINC02378-201ENST00000540399 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
LINC02378-201ENST00000540399 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
LINC02378-201ENST00000540399 RIMBP2O15034 1052 aa11.56□□□□□ -0.56
LINC02378-201ENST00000540399 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
LINC02378-201ENST00000540399 MMRN1Q13201 1228 aa11.53□□□□□ -0.56
LINC02378-201ENST00000540399 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
LINC02378-201ENST00000540399 KIF3CO14782 793 aa11.51□□□□□ -0.57
LINC02378-201ENST00000540399 ERBB3P21860 1342 aa11.5□□□□□ -0.57
LINC02378-201ENST00000540399 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
LINC02378-201ENST00000540399 PPP1R37O75864 691 aa11.46□□□□□ -0.57
LINC02378-201ENST00000540399 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
LINC02378-201ENST00000540399 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
LINC02378-201ENST00000540399 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
LINC02378-201ENST00000540399 ZNF687Q8N1G0 1237 aa11.4□□□□□ -0.58
LINC02378-201ENST00000540399 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC02378-201ENST00000540399 SLC34A2O95436 690 aa11.37□□□□□ -0.59
LINC02378-201ENST00000540399 TMC2Q8TDI7 906 aa11.37□□□□□ -0.59
LINC02378-201ENST00000540399 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
LINC02378-201ENST00000540399 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
LINC02378-201ENST00000540399 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
LINC02378-201ENST00000540399 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
LINC02378-201ENST00000540399 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
LINC02378-201ENST00000540399 NUDT7P0C024 238 aa11.3□□□□□ -0.6
LINC02378-201ENST00000540399 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
LINC02378-201ENST00000540399 FOXK1P85037 733 aa11.26□□□□□ -0.61
LINC02378-201ENST00000540399 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
LINC02378-201ENST00000540399 KDM4FA0A1W2PPD8 638 aa11.24□□□□□ -0.61
LINC02378-201ENST00000540399 PTCD2Q8WV60 388 aaKnown RBP11.23□□□□□ -0.61
LINC02378-201ENST00000540399 PLPP6Q8IY26 295 aa11.22□□□□□ -0.61
LINC02378-201ENST00000540399 DSG2Q14126 1118 aa11.21□□□□□ -0.61
LINC02378-201ENST00000540399 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
LINC02378-201ENST00000540399 POTEEQ6S8J3 1075 aa11.2□□□□□ -0.62
LINC02378-201ENST00000540399 PBX2P40425 430 aa11.19□□□□□ -0.62
LINC02378-201ENST00000540399 LSM11P83369 360 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC02378-201ENST00000540399 RNF166Q96A37 237 aaPredicted RBP11.19□□□□□ -0.62
LINC02378-201ENST00000540399 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
LINC02378-201ENST00000540399 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
LINC02378-201ENST00000540399 PTGER2P43116 358 aa11.17□□□□□ -0.62
LINC02378-201ENST00000540399 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
LINC02378-201ENST00000540399 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
LINC02378-201ENST00000540399 PSDA5PKW4 1024 aaPredicted RBP11.13□□□□□ -0.63
LINC02378-201ENST00000540399 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
LINC02378-201ENST00000540399 TBC1D12O60347 775 aa11.1□□□□□ -0.63
LINC02378-201ENST00000540399 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
LINC02378-201ENST00000540399 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
LINC02378-201ENST00000540399 ARHGAP33O14559 1287 aa11.09□□□□□ -0.63
LINC02378-201ENST00000540399 PPP1R15BQ5SWA1 713 aa11.07□□□□□ -0.64
LINC02378-201ENST00000540399 PDE4AP27815 886 aa11.06□□□□□ -0.64
LINC02378-201ENST00000540399 PPP4R3BQ5MIZ7 849 aa11.03□□□□□ -0.64
LINC02378-201ENST00000540399 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
LINC02378-201ENST00000540399 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC02378-201ENST00000540399 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.65
LINC02378-201ENST00000540399 PSEN2P49810 448 aa11.01□□□□□ -0.65
LINC02378-201ENST00000540399 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
LINC02378-201ENST00000540399 TK2O00142 265 aa11□□□□□ -0.65
LINC02378-201ENST00000540399 LARP6Q9BRS8 491 aaKnown RBP10.99□□□□□ -0.65
LINC02378-201ENST00000540399 HRO43593 1189 aa10.98□□□□□ -0.65
LINC02378-201ENST00000540399 MFSD10Q14728 455 aa10.98□□□□□ -0.65
LINC02378-201ENST00000540399 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
LINC02378-201ENST00000540399 ANO8Q9HCE9 1232 aaPredicted RBP10.97□□□□□ -0.65
LINC02378-201ENST00000540399 FOSBP53539 338 aa10.94□□□□□ -0.66
LINC02378-201ENST00000540399 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
LINC02378-201ENST00000540399 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
LINC02378-201ENST00000540399 KCNK17Q96T54 332 aa10.93□□□□□ -0.66
LINC02378-201ENST00000540399 EVI5O60447 810 aa10.92□□□□□ -0.66
LINC02378-201ENST00000540399 BCL2L12Q9HB09 334 aa10.92□□□□□ -0.66
LINC02378-201ENST00000540399 EMILIN3Q9NT22 766 aa10.91□□□□□ -0.66
LINC02378-201ENST00000540399 JPH4Q96JJ6 628 aa10.89□□□□□ -0.67
LINC02378-201ENST00000540399 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
LINC02378-201ENST00000540399 SLC24A1O60721 1099 aa10.88□□□□□ -0.67
LINC02378-201ENST00000540399 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
LINC02378-201ENST00000540399 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
LINC02378-201ENST00000540399 MAP3K9P80192 1104 aa10.87□□□□□ -0.67
LINC02378-201ENST00000540399 SLC4A5Q9BY07 1137 aa10.87□□□□□ -0.67
LINC02378-201ENST00000540399 PTPREP23469 700 aa10.84□□□□□ -0.67
LINC02378-201ENST00000540399 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
LINC02378-201ENST00000540399 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
LINC02378-201ENST00000540399 ADAM33Q9BZ11 813 aa10.84□□□□□ -0.67
LINC02378-201ENST00000540399 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
LINC02378-201ENST00000540399 BHMG1C9JSJ3 638 aaPredicted RBP10.82□□□□□ -0.68
LINC02378-201ENST00000540399 CAMK2BQ13554 666 aa10.82□□□□□ -0.68
LINC02378-201ENST00000540399 ZBED2Q9BTP6 218 aa10.82□□□□□ -0.68
LINC02378-201ENST00000540399 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
LINC02378-201ENST00000540399 STAC3Q96MF2 364 aa10.8□□□□□ -0.68
LINC02378-201ENST00000540399 PCDHGA10Q9Y5H3 936 aa10.8□□□□□ -0.68
LINC02378-201ENST00000540399 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
LINC02378-201ENST00000540399 PHF14O94880 888 aa10.75□□□□□ -0.69
LINC02378-201ENST00000540399 PPP1R3GB7ZBB8 358 aa10.73□□□□□ -0.69
LINC02378-201ENST00000540399 DPYSL4O14531 572 aa10.73□□□□□ -0.69
LINC02378-201ENST00000540399 TYW1BQ6NUM6 668 aa10.73□□□□□ -0.69
LINC02378-201ENST00000540399 FBXW7Q969H0 707 aa10.73□□□□□ -0.69
LINC02378-201ENST00000540399 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
LINC02378-201ENST00000540399 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
LINC02378-201ENST00000540399 COL9A1P20849 921 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms