RNA–Protein interactions for RNA: ENST00000540378.1

LRTM2-204, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-204ENST00000540378 LRRIQ1Q96JM4 1722 aa25■■□□□ 1.59
LRTM2-204ENST00000540378 POGZQ7Z3K3 1410 aa24.99■■□□□ 1.59
LRTM2-204ENST00000540378 YEATS2Q9ULM3 1422 aa24.99■■□□□ 1.59
LRTM2-204ENST00000540378 PCF11O94913 1555 aaKnown RBP24.98■■□□□ 1.59
LRTM2-204ENST00000540378 EFCAB2Q5VUJ9 269 aa24.96■■□□□ 1.59
LRTM2-204ENST00000540378 MAGI2Q86UL8 1455 aa24.96■■□□□ 1.59
LRTM2-204ENST00000540378 ARHGAP5Q13017 1502 aa24.94■■□□□ 1.58
LRTM2-204ENST00000540378 RIMS1Q86UR5 1692 aaKnown RBP24.94■■□□□ 1.58
LRTM2-204ENST00000540378 CASKIN1Q8WXD9 1431 aa24.94■■□□□ 1.58
LRTM2-204ENST00000540378 CCDC18Q5T9S5 1454 aa24.92■■□□□ 1.58
LRTM2-204ENST00000540378 SIGLEC1Q9BZZ2 1709 aa24.9■■□□□ 1.58
LRTM2-204ENST00000540378 FYCO1Q9BQS8 1478 aa24.86■■□□□ 1.57
LRTM2-204ENST00000540378 MLECQ14165 292 aa24.86■■□□□ 1.57
LRTM2-204ENST00000540378 ILDR1Q86SU0 546 aaPredicted RBP24.86■■□□□ 1.57
LRTM2-204ENST00000540378 ZNF518AQ6AHZ1 1483 aa24.85■■□□□ 1.57
LRTM2-204ENST00000540378 PLPPR3Q6T4P5 718 aa24.85■■□□□ 1.57
LRTM2-204ENST00000540378 ATP10AO60312 1499 aa24.83■■□□□ 1.57
LRTM2-204ENST00000540378 C9orf84Q5VXU9 1444 aa24.83■■□□□ 1.57
LRTM2-204ENST00000540378 PREX2Q70Z35 1606 aa24.83■■□□□ 1.56
LRTM2-204ENST00000540378 CDC42BPBQ9Y5S2 1711 aa24.82■■□□□ 1.56
LRTM2-204ENST00000540378 MYT1LQ9UL68 1186 aa24.81■■□□□ 1.56
LRTM2-204ENST00000540378 KDM5CP41229 1560 aa24.8■■□□□ 1.56
LRTM2-204ENST00000540378 FER1L4A9Z1Z3 1794 aa24.8■■□□□ 1.56
LRTM2-204ENST00000540378 AFAP1Q8N556 730 aa24.8■■□□□ 1.56
LRTM2-204ENST00000540378 LMTK3Q96Q04 1460 aa24.79■■□□□ 1.56
LRTM2-204ENST00000540378 ABCC1P33527 1531 aa24.76■■□□□ 1.55
LRTM2-204ENST00000540378 ARHGEF12Q9NZN5 1544 aa24.74■■□□□ 1.55
LRTM2-204ENST00000540378 CDC42BPAQ5VT25 1732 aa24.73■■□□□ 1.55
LRTM2-204ENST00000540378 ITSN2Q9NZM3 1697 aa24.73■■□□□ 1.55
LRTM2-204ENST00000540378 DIP2CQ9Y2E4 1556 aa24.73■■□□□ 1.55
LRTM2-204ENST00000540378 TRAPPC8Q9Y2L5 1435 aa24.72■■□□□ 1.55
LRTM2-204ENST00000540378 ABCA6Q8N139 1617 aa24.7■■□□□ 1.54
LRTM2-204ENST00000540378 MLH3Q9UHC1 1453 aa24.7■■□□□ 1.54
LRTM2-204ENST00000540378 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
LRTM2-204ENST00000540378 HSPA2P54652 639 aa24.67■■□□□ 1.54
LRTM2-204ENST00000540378 REREQ9P2R6 1566 aa24.66■■□□□ 1.54
LRTM2-204ENST00000540378 SAMD9LQ8IVG5 1584 aa24.64■■□□□ 1.54
LRTM2-204ENST00000540378 GPATCH8Q9UKJ3 1502 aaKnown RBP24.64■■□□□ 1.53
LRTM2-204ENST00000540378 MTUS2Q5JR59 1369 aa24.63■■□□□ 1.53
LRTM2-204ENST00000540378 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
LRTM2-204ENST00000540378 CEBPAP49715 358 aaPredicted RBP24.61■■□□□ 1.53
LRTM2-204ENST00000540378 KIDINS220Q9ULH0 1771 aa24.61■■□□□ 1.53
LRTM2-204ENST00000540378 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
LRTM2-204ENST00000540378 CCNB3Q8WWL7 1395 aa24.59■■□□□ 1.53
LRTM2-204ENST00000540378 AGLP35573 1532 aa24.58■■□□□ 1.53
LRTM2-204ENST00000540378 PREX1Q8TCU6 1659 aa24.57■■□□□ 1.52
LRTM2-204ENST00000540378 CFDP1Q9UEE9 299 aaPredicted RBP24.57■■□□□ 1.52
LRTM2-204ENST00000540378 HNRNPMP52272 730 aaKnown RBP eCLIP24.55■■□□□ 1.52
LRTM2-204ENST00000540378 EHBP1L1Q8N3D4 1523 aa24.55■■□□□ 1.52
LRTM2-204ENST00000540378 PLEKHH2Q8IVE3 1493 aa24.54■■□□□ 1.52
LRTM2-204ENST00000540378 ESF1Q9H501 851 aaKnown RBP24.54■■□□□ 1.52
LRTM2-204ENST00000540378 SPAG9O60271 1321 aaKnown RBP24.54■■□□□ 1.52
LRTM2-204ENST00000540378 KIAA1107Q9UPP5 1409 aa24.52■■□□□ 1.52
LRTM2-204ENST00000540378 TIAM1Q13009 1591 aa24.51■■□□□ 1.51
LRTM2-204ENST00000540378 FBXO41Q8TF61 875 aa24.51■■□□□ 1.51
LRTM2-204ENST00000540378 UHRF1BP1Q6BDS2 1440 aa24.5■■□□□ 1.51
LRTM2-204ENST00000540378 ATP7AQ04656 1500 aa24.5■■□□□ 1.51
LRTM2-204ENST00000540378 C3P01024 1663 aa24.5■■□□□ 1.51
LRTM2-204ENST00000540378 INO80Q9ULG1 1556 aaPredicted RBP24.47■■□□□ 1.51
LRTM2-204ENST00000540378 CNTLNQ9NXG0 1405 aa24.45■■□□□ 1.51
LRTM2-204ENST00000540378 SUPT6HQ7KZ85 1726 aaKnown RBP24.45■■□□□ 1.5
LRTM2-204ENST00000540378 ZNF644Q9H582 1327 aaPredicted RBP24.43■■□□□ 1.5
LRTM2-204ENST00000540378 SETD1BQ9UPS6 1966 aaKnown RBP24.42■■□□□ 1.5
LRTM2-204ENST00000540378 A2MP01023 1474 aa24.42■■□□□ 1.5
LRTM2-204ENST00000540378 PLXNC1O60486 1568 aa24.41■■□□□ 1.5
LRTM2-204ENST00000540378 NCOA2Q15596 1464 aa24.38■■□□□ 1.49
LRTM2-204ENST00000540378 MROH2AA6NES4 1674 aa24.37■■□□□ 1.49
LRTM2-204ENST00000540378 MBD5Q9P267 1494 aa24.37■■□□□ 1.49
LRTM2-204ENST00000540378 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
LRTM2-204ENST00000540378 ADGBQ8N7X0 1667 aa24.36■■□□□ 1.49
LRTM2-204ENST00000540378 STRCQ7RTU9 1775 aa24.35■■□□□ 1.49
LRTM2-204ENST00000540378 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
LRTM2-204ENST00000540378 CLTCQ00610 1675 aaKnown RBP24.34■■□□□ 1.49
LRTM2-204ENST00000540378 ZMYM3Q14202 1370 aa24.33■■□□□ 1.49
LRTM2-204ENST00000540378 GGT6Q6P531 493 aa24.33■■□□□ 1.49
LRTM2-204ENST00000540378 CAMSAP2Q08AD1 1489 aa24.32■■□□□ 1.48
LRTM2-204ENST00000540378 CERKQ8TCT0 537 aa24.32■■□□□ 1.48
LRTM2-204ENST00000540378 DMRT2Q9Y5R5 561 aa24.32■■□□□ 1.48
LRTM2-204ENST00000540378 NPATQ14207 1427 aa24.31■■□□□ 1.48
LRTM2-204ENST00000540378 CCDC141Q6ZP82 1450 aa24.31■■□□□ 1.48
LRTM2-204ENST00000540378 RTEL1-TNFRSF6BF6WH68 1400 aa24.3■■□□□ 1.48
LRTM2-204ENST00000540378 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
LRTM2-204ENST00000540378 DHX29Q7Z478 1369 aaKnown RBP24.24■■□□□ 1.47
LRTM2-204ENST00000540378 NCOA1Q15788 1441 aa24.24■■□□□ 1.47
LRTM2-204ENST00000540378 PTPRTO14522 1441 aa24.23■■□□□ 1.47
LRTM2-204ENST00000540378 CAMSAP1Q5T5Y3 1602 aa24.22■■□□□ 1.47
LRTM2-204ENST00000540378 MYO3AQ8NEV4 1616 aa24.22■■□□□ 1.47
LRTM2-204ENST00000540378 PTPRKQ15262 1439 aa24.21■■□□□ 1.47
LRTM2-204ENST00000540378 PPP6R1Q9UPN7 881 aa24.21■■□□□ 1.47
LRTM2-204ENST00000540378 RSPH4AQ5TD94 716 aa24.2■■□□□ 1.46
LRTM2-204ENST00000540378 ARHGEF5Q12774 1597 aa24.2■■□□□ 1.46
LRTM2-204ENST00000540378 KIF3BO15066 747 aa24.19■■□□□ 1.46
LRTM2-204ENST00000540378 ZNF142P52746 1687 aaPredicted RBP24.18■■□□□ 1.46
LRTM2-204ENST00000540378 CEP170BQ9Y4F5 1589 aaPredicted RBP24.17■■□□□ 1.46
LRTM2-204ENST00000540378 MAP3K1Q13233 1512 aa24.16■■□□□ 1.46
LRTM2-204ENST00000540378 TSPY4P0CV99 314 aa24.16■■□□□ 1.46
LRTM2-204ENST00000540378 TSPY10P0CW01 314 aa24.16■■□□□ 1.46
LRTM2-204ENST00000540378 KANK4Q5T7N3 995 aaPredicted RBP24.16■■□□□ 1.46
LRTM2-204ENST00000540378 KDM5DQ9BY66 1539 aa24.14■■□□□ 1.45
LRTM2-204ENST00000540378 NCKAP5LQ9HCH0 1330 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms